RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 DZIP1LQ8IYY4 767 aaKnown RBP24.8■■□□□ 1.56
GCN1-207ENST00000550471 ZNF70Q9UC06 446 aaPredicted RBP24.8■■□□□ 1.56
GCN1-207ENST00000550471 ARAP2Q8WZ64 1704 aa24.8■■□□□ 1.56
GCN1-207ENST00000550471 CLRN2A0PK11 232 aa24.79■■□□□ 1.56
GCN1-207ENST00000550471 TM4SF4P48230 202 aa24.79■■□□□ 1.56
GCN1-207ENST00000550471 HNRNPUQ00839 825 aaKnown RBP eCLIP24.79■■□□□ 1.56
GCN1-207ENST00000550471 MTX1Q13505 466 aa24.79■■□□□ 1.56
GCN1-207ENST00000550471 ATP2B3Q16720 1220 aa24.79■■□□□ 1.56
GCN1-207ENST00000550471 HOOK2Q96ED9 719 aa24.79■■□□□ 1.56
GCN1-207ENST00000550471 TMOD2Q9NZR1 351 aa24.79■■□□□ 1.56
GCN1-207ENST00000550471 TRPA1O75762 1119 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 ZBTB48P10074 688 aaPredicted RBP24.78■■□□□ 1.56
GCN1-207ENST00000550471 RASA3Q14644 834 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 MOB2Q70IA6 237 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 MIER1Q8N108 512 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 SLC10A4Q96EP9 437 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 MEIS3Q99687 375 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 TSKSQ9UJT2 592 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 AKAP2Q9Y2D5 859 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 AKAP11Q9UKA4 1901 aa24.78■■□□□ 1.56
GCN1-207ENST00000550471 ALDH1A1P00352 501 aa24.77■■□□□ 1.56
GCN1-207ENST00000550471 NOM1Q5C9Z4 860 aaKnown RBP24.77■■□□□ 1.56
GCN1-207ENST00000550471 FKBP1CQ5VVH2 108 aa24.77■■□□□ 1.56
GCN1-207ENST00000550471 ZKSCAN2Q63HK3 967 aa24.77■■□□□ 1.56
GCN1-207ENST00000550471 HHIPL2Q6UWX4 724 aa24.77■■□□□ 1.56
GCN1-207ENST00000550471 ABHD8Q96I13 439 aa24.77■■□□□ 1.56
GCN1-207ENST00000550471 ZDHHC15Q96MV8 337 aa24.77■■□□□ 1.56
GCN1-207ENST00000550471 GNAI2P04899 355 aa24.76■■□□□ 1.55
GCN1-207ENST00000550471 TRIM27P14373 513 aa24.76■■□□□ 1.55
GCN1-207ENST00000550471 ZGPATQ8N5A5 531 aaKnown RBP24.76■■□□□ 1.55
GCN1-207ENST00000550471 SIL1Q9H173 461 aa24.76■■□□□ 1.55
GCN1-207ENST00000550471 DENND2AQ9ULE3 1009 aa24.76■■□□□ 1.55
GCN1-207ENST00000550471 IQSEC3Q9UPP2 1182 aaPredicted RBP24.76■■□□□ 1.55
GCN1-207ENST00000550471 MANSC4A6NHS7 340 aaPredicted RBP24.75■■□□□ 1.55
GCN1-207ENST00000550471 SPRYD7Q5W111 196 aa24.75■■□□□ 1.55
GCN1-207ENST00000550471 ANKRD13AQ8IZ07 590 aa24.75■■□□□ 1.55
GCN1-207ENST00000550471 FRAT1Q92837 279 aaPredicted RBP24.75■■□□□ 1.55
GCN1-207ENST00000550471 TDRD3Q9H7E2 651 aaKnown RBP24.75■■□□□ 1.55
GCN1-207ENST00000550471 SRGAP3O43295 1099 aa24.74■■□□□ 1.55
GCN1-207ENST00000550471 PRKG1Q13976 671 aa24.74■■□□□ 1.55
GCN1-207ENST00000550471 CFHR5Q9BXR6 569 aa24.74■■□□□ 1.55
GCN1-207ENST00000550471 PCDHAC2Q9Y5I4 1007 aa24.74■■□□□ 1.55
GCN1-207ENST00000550471 SALL1Q9NSC2 1324 aa24.73■■□□□ 1.55
GCN1-207ENST00000550471 FAM83AQ86UY5 434 aa24.73■■□□□ 1.55
GCN1-207ENST00000550471 PDS5AQ29RF7 1337 aaKnown RBP24.72■■□□□ 1.55
GCN1-207ENST00000550471 BCAR3O75815 825 aa24.72■■□□□ 1.55
GCN1-207ENST00000550471 NBPF12Q5TAG4 269 aaPredicted RBP24.72■■□□□ 1.55
GCN1-207ENST00000550471 ZBED9Q6R2W3 1325 aa24.71■■□□□ 1.55
GCN1-207ENST00000550471 OTUD7BQ6GQQ9 843 aa24.71■■□□□ 1.55
GCN1-207ENST00000550471 DGKZQ13574 1117 aa24.7■■□□□ 1.54
GCN1-207ENST00000550471 MCOLN1Q9GZU1 580 aa24.7■■□□□ 1.54
GCN1-207ENST00000550471 SSC5DA1L4H1 1573 aa24.69■■□□□ 1.54
GCN1-207ENST00000550471 USP2O75604 605 aaPredicted RBP24.69■■□□□ 1.54
GCN1-207ENST00000550471 LDHBP07195 334 aaKnown RBP24.69■■□□□ 1.54
GCN1-207ENST00000550471 MVPQ14764 893 aaKnown RBP24.69■■□□□ 1.54
GCN1-207ENST00000550471 PKN2Q16513 984 aaKnown RBP24.69■■□□□ 1.54
GCN1-207ENST00000550471 SLF2Q8IX21 1173 aa24.69■■□□□ 1.54
GCN1-207ENST00000550471 PA2G4Q9UQ80 394 aaKnown RBP24.69■■□□□ 1.54
GCN1-207ENST00000550471 RPAP1Q9BWH6 1393 aaPredicted RBP24.68■■□□□ 1.54
GCN1-207ENST00000550471 TCP10L2B9ZVM9 353 aa24.68■■□□□ 1.54
GCN1-207ENST00000550471 SPTY2D1Q68D10 685 aaPredicted RBP24.68■■□□□ 1.54
GCN1-207ENST00000550471 APOBEC3HQ6NTF7 200 aaKnown RBP24.68■■□□□ 1.54
GCN1-207ENST00000550471 FTSJ3Q8IY81 847 aaKnown RBP24.68■■□□□ 1.54
GCN1-207ENST00000550471 WNK4Q96J92 1243 aa24.68■■□□□ 1.54
GCN1-207ENST00000550471 TEPSINQ96N21 525 aa24.68■■□□□ 1.54
GCN1-207ENST00000550471 CASP8AP2Q9UKL3 1982 aa24.67■■□□□ 1.54
GCN1-207ENST00000550471 G3BP1Q13283 466 aaKnown RBP eCLIP24.67■■□□□ 1.542e-7■□□□□ 9.5
GCN1-207ENST00000550471 GRIK5Q16478 980 aa24.67■■□□□ 1.54
GCN1-207ENST00000550471 DCAF15Q66K64 600 aa24.67■■□□□ 1.54
GCN1-207ENST00000550471 CCDC102BQ68D86 513 aa24.67■■□□□ 1.54
GCN1-207ENST00000550471 CTU1Q7Z7A3 348 aaKnown RBP24.67■■□□□ 1.54
GCN1-207ENST00000550471 AOX1Q06278 1338 aa24.66■■□□□ 1.54
GCN1-207ENST00000550471 CLUAP1Q96AJ1 413 aa24.66■■□□□ 1.54
GCN1-207ENST00000550471 CSADQ9Y600 493 aa24.66■■□□□ 1.54
GCN1-207ENST00000550471 MS4A1P11836 297 aa24.65■■□□□ 1.54
GCN1-207ENST00000550471 MAP3K9P80192 1104 aa24.65■■□□□ 1.54
GCN1-207ENST00000550471 MYH13Q9UKX3 1938 aa24.65■■□□□ 1.54
GCN1-207ENST00000550471 A0A1B0GUL7 405 aa24.64■■□□□ 1.54
GCN1-207ENST00000550471 PHKA1P46020 1223 aa24.64■■□□□ 1.54
GCN1-207ENST00000550471 TMEM39BQ9GZU3 492 aa24.64■■□□□ 1.54
GCN1-207ENST00000550471 MKRN3Q13064 507 aaKnown RBP24.63■■□□□ 1.53
GCN1-207ENST00000550471 IFNL1Q8IU54 200 aa24.63■■□□□ 1.53
GCN1-207ENST00000550471 TMEM57Q8N5G2 664 aa24.63■■□□□ 1.53
GCN1-207ENST00000550471 FAM151AQ8WW52 585 aa24.63■■□□□ 1.53
GCN1-207ENST00000550471 CLMNQ96JQ2 1002 aa24.63■■□□□ 1.53
GCN1-207ENST00000550471 CCDC85CA6NKD9 419 aa24.62■■□□□ 1.53
GCN1-207ENST00000550471 GPR25O00155 361 aa24.62■■□□□ 1.53
GCN1-207ENST00000550471 IGSF3O75054 1194 aa24.62■■□□□ 1.53
GCN1-207ENST00000550471 TFCP2Q12800 502 aa24.62■■□□□ 1.53
GCN1-207ENST00000550471 GORABQ5T7V8 394 aa24.62■■□□□ 1.53
GCN1-207ENST00000550471 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.62■■□□□ 1.53
GCN1-207ENST00000550471 XAGE2Q96GT9 111 aa24.62■■□□□ 1.53
GCN1-207ENST00000550471 DAGLAQ9Y4D2 1042 aa24.62■■□□□ 1.53
GCN1-207ENST00000550471 TESPA1A2RU30 521 aaPredicted RBP24.61■■□□□ 1.53
GCN1-207ENST00000550471 TBC1D8O95759 1140 aa24.61■■□□□ 1.53
GCN1-207ENST00000550471 PRDX5P30044 214 aa24.61■■□□□ 1.53
GCN1-207ENST00000550471 TIMM10P62072 90 aa24.61■■□□□ 1.53
GCN1-207ENST00000550471 FAM163AQ96GL9 167 aaPredicted RBP24.61■■□□□ 1.53
GCN1-207ENST00000550471 GPR108Q9NPR9 543 aa24.61■■□□□ 1.53
GCN1-207ENST00000550471 FZD1Q9UP38 647 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms