RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 PRNPP04156 253 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 USP5P45974 858 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 USP11P51784 963 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 EHHADHQ08426 723 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 COL19A1Q14993 1142 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 SPRED3Q2MJR0 410 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 EZH1Q92800 747 aaPredicted RBP5.57□□□□□ -1.52
CCNT1-203ENST00000550457 TCF12Q99081 682 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 CCDC39Q9UFE4 941 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
CCNT1-203ENST00000550457 FAM170BA6NMN3 283 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 ADH5P11766 374 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 GRIA4P48058 902 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 FKBP4Q02790 459 aaKnown RBP eCLIP5.56□□□□□ -1.52
CCNT1-203ENST00000550457 PCDH1Q08174 1060 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 ZNF211Q13398 564 aaPredicted RBP5.56□□□□□ -1.52
CCNT1-203ENST00000550457 CPSF6Q16630 551 aaKnown RBP eCLIP5.56□□□□□ -1.52
CCNT1-203ENST00000550457 ZAR1Q86SH2 424 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 CCNJLQ8IV13 435 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 GIMAP7Q8NHV1 300 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 ACTL7BQ9Y614 415 aa5.56□□□□□ -1.52
CCNT1-203ENST00000550457 A0A096LPE4 126 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 A0A1W2PPZ6 126 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 ECEL1O95672 775 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 YBX3P16989 372 aaKnown RBP eCLIP5.55□□□□□ -1.52
CCNT1-203ENST00000550457 MAOBP27338 520 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 SF3B2Q13435 895 aaKnown RBP5.55□□□□□ -1.52
CCNT1-203ENST00000550457 USPL1Q5W0Q7 1092 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 CBLL1Q75N03 491 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 CCDC82Q8N4S0 544 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 TBC1D32Q96NH3 1257 aa5.55□□□□□ -1.52
CCNT1-203ENST00000550457 TRIM56Q9BRZ2 755 aaKnown RBP5.55□□□□□ -1.52
CCNT1-203ENST00000550457 CLEC4MQ9H2X3 399 aaPredicted RBP5.55□□□□□ -1.52
CCNT1-203ENST00000550457 ANGEL1Q9UNK9 670 aaKnown RBP5.55□□□□□ -1.52
CCNT1-203ENST00000550457 CYP26A1O43174 497 aa5.54□□□□□ -1.52
CCNT1-203ENST00000550457 ABL1P00519 1130 aa5.54□□□□□ -1.52
CCNT1-203ENST00000550457 NFICP08651 508 aa5.54□□□□□ -1.52
CCNT1-203ENST00000550457 VSIG10LQ86VR7 867 aa5.54□□□□□ -1.52
CCNT1-203ENST00000550457 GALNT12Q8IXK2 581 aa5.54□□□□□ -1.52
CCNT1-203ENST00000550457 METTL22Q9BUU2 404 aaPredicted RBP5.54□□□□□ -1.52
CCNT1-203ENST00000550457 RAB6AP20340 208 aa5.53□□□□□ -1.52
CCNT1-203ENST00000550457 POU4F3Q15319 338 aa5.53□□□□□ -1.52
CCNT1-203ENST00000550457 SEMA6CQ9H3T2 930 aa5.53□□□□□ -1.52
CCNT1-203ENST00000550457 ACSS3Q9H6R3 686 aa5.53□□□□□ -1.52
CCNT1-203ENST00000550457 C1orf115Q9H7X2 142 aa5.53□□□□□ -1.52
CCNT1-203ENST00000550457 LIN7BQ9HAP6 207 aa5.53□□□□□ -1.52
CCNT1-203ENST00000550457 FAM105AQ9NUU6 356 aa5.53□□□□□ -1.52
CCNT1-203ENST00000550457 DYNC1LI2O43237 492 aaPredicted RBP5.52□□□□□ -1.53
CCNT1-203ENST00000550457 PPP1R15AO75807 674 aaPredicted RBP5.52□□□□□ -1.53
CCNT1-203ENST00000550457 CYP11A1P05108 521 aa5.52□□□□□ -1.53
CCNT1-203ENST00000550457 ECM1Q16610 540 aa5.52□□□□□ -1.53
CCNT1-203ENST00000550457 AKAP4Q5JQC9 854 aa5.52□□□□□ -1.53
CCNT1-203ENST00000550457 ZNF765Q7L2R6 523 aa5.52□□□□□ -1.53
CCNT1-203ENST00000550457 DYMQ7RTS9 669 aa5.52□□□□□ -1.53
CCNT1-203ENST00000550457 YIPF2Q9BWQ6 316 aa5.52□□□□□ -1.53
CCNT1-203ENST00000550457 GSX1Q9H4S2 264 aaPredicted RBP5.52□□□□□ -1.53
CCNT1-203ENST00000550457 PAK6Q9NQU5 681 aaPredicted RBP5.52□□□□□ -1.53
CCNT1-203ENST00000550457 BSDC1Q9NW68 430 aaPredicted RBP5.52□□□□□ -1.53
CCNT1-203ENST00000550457 ZC3H7BQ9UGR2 993 aaKnown RBP5.52□□□□□ -1.53
CCNT1-203ENST00000550457 B3GALT4O96024 378 aa5.51□□□□□ -1.53
CCNT1-203ENST00000550457 SEZ6L2Q6UXD5 910 aa5.51□□□□□ -1.53
CCNT1-203ENST00000550457 TP53INP2Q8IXH6 220 aa5.51□□□□□ -1.53
CCNT1-203ENST00000550457 FBXL18Q96ME1 805 aa5.51□□□□□ -1.53
CCNT1-203ENST00000550457 LRRC4CQ9HCJ2 640 aa5.51□□□□□ -1.53
CCNT1-203ENST00000550457 C1GALT1Q9NS00 363 aa5.51□□□□□ -1.53
CCNT1-203ENST00000550457 MTMR7Q9Y216 660 aa5.51□□□□□ -1.53
CCNT1-203ENST00000550457 EIF4EBP3O60516 100 aaPredicted RBP5.5□□□□□ -1.53
CCNT1-203ENST00000550457 ICMTO60725 284 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 ITGB5P18084 799 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 MAP7Q14244 749 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 KIAA0319Q5VV43 1072 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 OGFOD2Q6N063 350 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 WFDC3Q8IUB2 231 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 FLCNQ8NFG4 579 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 ZNF576Q9H609 170 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 AP4E1Q9UPM8 1137 aa5.5□□□□□ -1.53
CCNT1-203ENST00000550457 ARID1BQ8NFD5 2236 aaPredicted RBP5.5□□□□□ -1.53
CCNT1-203ENST00000550457 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.49□□□□□ -1.53
CCNT1-203ENST00000550457 ITPKAP23677 461 aa5.49□□□□□ -1.53
CCNT1-203ENST00000550457 ASPAP45381 313 aa5.49□□□□□ -1.53
CCNT1-203ENST00000550457 ORC1Q13415 861 aa5.49□□□□□ -1.53
CCNT1-203ENST00000550457 DUSP27Q5VZP5 1158 aa5.49□□□□□ -1.53
CCNT1-203ENST00000550457 WDR18Q9BV38 432 aa5.49□□□□□ -1.53
CCNT1-203ENST00000550457 LGR6Q9HBX8 967 aa5.49□□□□□ -1.53
CCNT1-203ENST00000550457 RAD18Q9NS91 495 aa5.49□□□□□ -1.53
CCNT1-203ENST00000550457 AOC2O75106 756 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 SERPINB4P48594 390 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 ARHGAP4P98171 946 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 FZD5Q13467 585 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 CORO1BQ9BR76 489 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 EGFL7Q9UHF1 273 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 BRPF3Q9ULD4 1205 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 PPP1R9AQ9ULJ8 1098 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 DAGLAQ9Y4D2 1042 aa5.48□□□□□ -1.53
CCNT1-203ENST00000550457 H3BRB1 525 aa5.47□□□□□ -1.53
CCNT1-203ENST00000550457 CYP27A1Q02318 531 aa5.47□□□□□ -1.53
CCNT1-203ENST00000550457 HP1BP3Q5SSJ5 553 aaPredicted RBP5.47□□□□□ -1.53
CCNT1-203ENST00000550457 OGFOD3Q6PK18 319 aa5.47□□□□□ -1.53
CCNT1-203ENST00000550457 ZNF574Q6ZN55 896 aaPredicted RBP5.47□□□□□ -1.53
CCNT1-203ENST00000550457 SPRED2Q7Z698 418 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms