RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 IFIT2P09913 472 aaKnown RBP21.4■■□□□ 1.02
CDK4-207ENST00000550419 HHIPL2Q6UWX4 724 aa21.4■■□□□ 1.02
CDK4-207ENST00000550419 TEKT1Q969V4 418 aa21.4■■□□□ 1.02
CDK4-207ENST00000550419 PRDX5P30044 214 aa21.39■■□□□ 1.01
CDK4-207ENST00000550419 CRKP46108 304 aa21.39■■□□□ 1.01
CDK4-207ENST00000550419 APLP1P51693 650 aa21.39■■□□□ 1.01
CDK4-207ENST00000550419 ANGEL2Q5VTE6 544 aaKnown RBP21.39■■□□□ 1.01
CDK4-207ENST00000550419 KRT26Q7Z3Y9 468 aa21.39■■□□□ 1.01
CDK4-207ENST00000550419 GCC1Q96CN9 775 aa21.39■■□□□ 1.01
CDK4-207ENST00000550419 ASTN2O75129 1339 aaPredicted RBP21.38■■□□□ 1.01
CDK4-207ENST00000550419 MYO1BO43795 1136 aa21.38■■□□□ 1.01
CDK4-207ENST00000550419 SULF1Q8IWU6 871 aa21.38■■□□□ 1.01
CDK4-207ENST00000550419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.38■■□□□ 1.01
CDK4-207ENST00000550419 PRMT6Q96LA8 375 aaPredicted RBP21.38■■□□□ 1.01
CDK4-207ENST00000550419 ZDHHC15Q96MV8 337 aa21.38■■□□□ 1.01
CDK4-207ENST00000550419 GLIS2Q9BZE0 524 aaPredicted RBP21.38■■□□□ 1.01
CDK4-207ENST00000550419 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDK4-207ENST00000550419 PI16Q6UXB8 463 aa21.37■■□□□ 1.01
CDK4-207ENST00000550419 APOBEC3FQ8IUX4 373 aaKnown RBP21.37■■□□□ 1.01
CDK4-207ENST00000550419 RWDD1Q9H446 243 aaPredicted RBP21.37■■□□□ 1.01
CDK4-207ENST00000550419 AKAP11Q9UKA4 1901 aa21.36■■□□□ 1.01
CDK4-207ENST00000550419 ABCF2Q9UG63 623 aa21.36■■□□□ 1.01
CDK4-207ENST00000550419 ECM29Q5VYK3 1845 aa21.35■■□□□ 1.01
CDK4-207ENST00000550419 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
CDK4-207ENST00000550419 USP48Q86UV5 1035 aa21.35■■□□□ 1.01
CDK4-207ENST00000550419 SLF2Q8IX21 1173 aa21.35■■□□□ 1.01
CDK4-207ENST00000550419 FAM163AQ96GL9 167 aaPredicted RBP21.35■■□□□ 1.01
CDK4-207ENST00000550419 PCDHAC2Q9Y5I4 1007 aa21.35■■□□□ 1.01
CDK4-207ENST00000550419 TRAF5O00463 557 aa21.34■■□□□ 1.01
CDK4-207ENST00000550419 CYP2E1P05181 493 aaPredicted RBP21.34■■□□□ 1.01
CDK4-207ENST00000550419 SPDYE2Q495Y8 402 aa21.34■■□□□ 1.01
CDK4-207ENST00000550419 APOBEC3HQ6NTF7 200 aaKnown RBP21.34■■□□□ 1.01
CDK4-207ENST00000550419 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
CDK4-207ENST00000550419 CREBZFQ9NS37 354 aa21.34■■□□□ 1.01
CDK4-207ENST00000550419 TMEM88BA6NKF7 163 aa21.33■■□□□ 1.01
CDK4-207ENST00000550419 SMARCA5O60264 1052 aaPredicted RBP21.33■■□□□ 1.01
CDK4-207ENST00000550419 ATP5JP18859 108 aa21.33■■□□□ 1.01
CDK4-207ENST00000550419 ZAP70P43403 619 aa21.33■■□□□ 1.01
CDK4-207ENST00000550419 TMED8Q6PL24 325 aaPredicted RBP21.33■■□□□ 1.01
CDK4-207ENST00000550419 DZIP1Q86YF9 867 aaKnown RBP21.33■■□□□ 1.01
CDK4-207ENST00000550419 SNRKQ9NRH2 765 aa21.33■■□□□ 1.01
CDK4-207ENST00000550419 PPP2R3BQ9Y5P8 575 aa21.33■■□□□ 1.01
CDK4-207ENST00000550419 GAKO14976 1311 aa21.32■■□□□ 1
CDK4-207ENST00000550419 ADM5C9JUS6 153 aa21.32■■□□□ 1
CDK4-207ENST00000550419 IRX6P78412 446 aaPredicted RBP21.32■■□□□ 1
CDK4-207ENST00000550419 GSTO1P78417 241 aa21.32■■□□□ 1
CDK4-207ENST00000550419 MECOMQ03112 1051 aa21.32■■□□□ 1
CDK4-207ENST00000550419 DIXDC1Q155Q3 683 aa21.32■■□□□ 1
CDK4-207ENST00000550419 FKBP1CQ5VVH2 108 aa21.32■■□□□ 1
CDK4-207ENST00000550419 TBC1D9Q6ZT07 1266 aa21.32■■□□□ 1
CDK4-207ENST00000550419 NSUN4Q96CB9 384 aaKnown RBP21.32■■□□□ 1
CDK4-207ENST00000550419 LRP2BPQ9P2M1 347 aa21.32■■□□□ 1
CDK4-207ENST00000550419 ZNF70Q9UC06 446 aaPredicted RBP21.32■■□□□ 1
CDK4-207ENST00000550419 DAGLAQ9Y4D2 1042 aa21.32■■□□□ 1
CDK4-207ENST00000550419 POLR2AP24928 1970 aaKnown RBP21.31■■□□□ 1
CDK4-207ENST00000550419 TNFAIP1Q13829 316 aa21.31■■□□□ 1
CDK4-207ENST00000550419 CST9Q5W186 159 aa21.31■■□□□ 1
CDK4-207ENST00000550419 TDRD3Q9H7E2 651 aaKnown RBP21.31■■□□□ 1
CDK4-207ENST00000550419 AOX1Q06278 1338 aa21.3■■□□□ 1
CDK4-207ENST00000550419 LDHCP07864 332 aa21.3■■□□□ 1
CDK4-207ENST00000550419 FMR1Q06787 632 aaKnown RBP eCLIP21.3■■□□□ 12e-6■□□□□ 10.3
CDK4-207ENST00000550419 TTF1Q15361 905 aaPredicted RBP21.3■■□□□ 1
CDK4-207ENST00000550419 ZNF384Q8TF68 577 aa21.3■■□□□ 1
CDK4-207ENST00000550419 GPATCH3Q96I76 525 aa21.3■■□□□ 1
CDK4-207ENST00000550419 DEFB129Q9H1M3 183 aa21.3■■□□□ 1
CDK4-207ENST00000550419 ECHDC1Q9NTX5 307 aa21.3■■□□□ 1
CDK4-207ENST00000550419 TRPM7Q96QT4 1865 aa21.3■■□□□ 1
CDK4-207ENST00000550419 MROH7-TTC4A0A0A0MT08 1334 aa21.29■■□□□ 1
CDK4-207ENST00000550419 CLRN2A0PK11 232 aa21.29■■□□□ 1
CDK4-207ENST00000550419 CELF2O95319 508 aaKnown RBP21.29■■□□□ 1
CDK4-207ENST00000550419 IGHDP01880 384 aa21.29■■□□□ 1
CDK4-207ENST00000550419 CDCA5Q96FF9 252 aa21.29■■□□□ 1
CDK4-207ENST00000550419 RAI14Q9P0K7 980 aa21.29■■□□□ 1
CDK4-207ENST00000550419 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
CDK4-207ENST00000550419 MAP4K4O95819 1239 aaPredicted RBP21.28■■□□□ 1
CDK4-207ENST00000550419 CENPBP07199 599 aaPredicted RBP21.28■■□□□ 1
CDK4-207ENST00000550419 ANKRD45Q5TZF3 282 aa21.28■■□□□ 1
CDK4-207ENST00000550419 HAUS7Q99871 368 aa21.28■■□□□ 1
CDK4-207ENST00000550419 VEZTQ9HBM0 779 aa21.28■■□□□ 1
CDK4-207ENST00000550419 PIH1D3Q9NQM4 214 aaKnown RBP21.28■■□□□ 1
CDK4-207ENST00000550419 TMOD2Q9NZR1 351 aa21.28■■□□□ 1
CDK4-207ENST00000550419 TTC41PQ6P2S7 1318 aa21.28■■□□□ 1
CDK4-207ENST00000550419 CEP350Q5VT06 3117 aa21.27■■□□□ 1
CDK4-207ENST00000550419 GPR75-ASB3A0A0A6YYF3 556 aa21.27■■□□□ 1
CDK4-207ENST00000550419 TNNI2P48788 182 aa21.27■■□□□ 1
CDK4-207ENST00000550419 FKBP1BP68106 108 aa21.27■■□□□ 1
CDK4-207ENST00000550419 DLK2Q6UY11 383 aa21.27■■□□□ 1
CDK4-207ENST00000550419 FAM83AQ86UY5 434 aa21.27■■□□□ 1
CDK4-207ENST00000550419 BCL11AQ9H165 835 aa21.27■■□□□ 1
CDK4-207ENST00000550419 MAST2Q6P0Q8 1798 aa21.27■■□□□ 1
CDK4-207ENST00000550419 MAP3K12Q12852 859 aa21.26■□□□□ 0.99
CDK4-207ENST00000550419 CDC42EP5Q6NZY7 148 aa21.26■□□□□ 0.99
CDK4-207ENST00000550419 SALL3Q9BXA9 1300 aa21.26■□□□□ 0.99
CDK4-207ENST00000550419 MYH2Q9UKX2 1941 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 RASA3Q14644 834 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 NAA16Q6N069 864 aaPredicted RBP21.25■□□□□ 0.99
CDK4-207ENST00000550419 HHIPL1Q96JK4 782 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 BOLA2Q9H3K6 86 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 ANTXR1Q9H6X2 564 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms