RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 ZSWIM4Q9H7M6 989 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 USP21Q9UK80 565 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 PCDHA7Q9UN72 937 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 CFAP100Q494V2 611 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 TTLL7Q6ZT98 887 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 MRPS27Q92552 414 aaKnown RBP12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 UBXN4Q92575 508 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 NOL10Q9BSC4 688 aaKnown RBP12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 CTAGE5O15320 804 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 VPS72Q15906 364 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 SYNE3Q6ZMZ3 975 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 DNAJC10Q8IXB1 793 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 CLIC4Q9Y696 253 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 U3KPZ7 1027 aaPredicted RBP12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 NEMFO60524 1076 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 SEC31AO94979 1220 aaKnown RBP12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 ATP1A3P13637 1013 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 RXRAP19793 462 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 TPM4P67936 248 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 MTX1Q13505 466 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 TNNI3KQ59H18 835 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 CCDC34Q96HJ3 373 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 FPGT-TNNI3KV9GXZ4 949 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 A0A087WZG4 1122 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 CCDC66A2RUB6 948 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 E4F1Q66K89 784 aaPredicted RBP12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 RBM43Q6ZSC3 357 aaKnown RBP12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 KCNB2Q92953 911 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 PPP1R13BQ96KQ4 1090 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 UTP14AQ9BVJ6 771 aaKnown RBP12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
SMARCC2-208ENST00000550150 COL15A1P39059 1388 aa12.46□□□□□ -0.41
SMARCC2-208ENST00000550150 UTYO14607 1347 aa12.46□□□□□ -0.41
SMARCC2-208ENST00000550150 AFF2P51816 1311 aa12.46□□□□□ -0.41
SMARCC2-208ENST00000550150 SPATA31A6Q5VVP1 1343 aa12.46□□□□□ -0.41
SMARCC2-208ENST00000550150 RREB1Q92766 1687 aa12.46□□□□□ -0.41
SMARCC2-208ENST00000550150 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
SMARCC2-208ENST00000550150 DHX32Q7L7V1 743 aaKnown RBP12.46□□□□□ -0.41
SMARCC2-208ENST00000550150 CTDNEP1O95476 244 aa12.46□□□□□ -0.42
SMARCC2-208ENST00000550150 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.42
SMARCC2-208ENST00000550150 C8orf76Q96K31 380 aa12.46□□□□□ -0.42
SMARCC2-208ENST00000550150 THRAP3Q9Y2W1 955 aaKnown RBP12.46□□□□□ -0.42
SMARCC2-208ENST00000550150 CAVIN2O95810 425 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 SMIM5Q71RC9 77 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 A0A0G2JS52 829 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 CLCN6P51797 869 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 ZNF446Q9NWS9 450 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 RCOR1Q9UKL0 485 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 GSDMDP57764 484 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 TEX35Q5T0J7 233 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 TMCO3Q6UWJ1 677 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 LMBR1LQ6UX01 489 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 NEK11Q8NG66 645 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 CARD6Q9BX69 1037 aa12.45□□□□□ -0.42
SMARCC2-208ENST00000550150 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 MED23Q9ULK4 1368 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 NEURL1BA8MQ27 555 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 ATP2B1P20020 1258 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 CDC25BP30305 580 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 ADD1P35611 737 aaKnown RBP12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 GCKRQ14397 625 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 ZCCHC17Q9NP64 241 aaKnown RBP12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 BMS1Q14692 1282 aaKnown RBP12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 SYCP1Q15431 976 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 SPECC1Q5M775 1068 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 ZNF594Q96JF6 807 aaPredicted RBP12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 DDX60Q8IY21 1712 aaKnown RBP12.44□□□□□ -0.42
SMARCC2-208ENST00000550150 SBF2Q86WG5 1849 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 E7EWF7 191 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 ZNF609O15014 1411 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 PFKFB2O60825 505 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 KIAA1468Q9P260 1216 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 ORC3Q9UBD5 711 aaPredicted RBP12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 KLF18A0A0U1RQI7 1052 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 SPTLC2O15270 562 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 UBASH3AP57075 661 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 ANKRD13DQ6ZTN6 518 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 CREBRFQ8IUR6 639 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 BTAF1O14981 1849 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 ZNF202O95125 648 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 PDIA3P30101 505 aaKnown RBP12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 GYS2P54840 703 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
SMARCC2-208ENST00000550150 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.427e-8■■■■□ 25.7
SMARCC2-208ENST00000550150 ATP5JP18859 108 aa12.42□□□□□ -0.42
SMARCC2-208ENST00000550150 ITPK1Q13572 414 aa12.42□□□□□ -0.42
SMARCC2-208ENST00000550150 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
SMARCC2-208ENST00000550150 ARGLU1Q9NWB6 273 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms