RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 UBE4AQ14139 1066 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 SF3B3Q15393 1217 aaKnown RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 RC3H1Q5TC82 1133 aaKnown RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 JMYQ8N9B5 988 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 NAP1L5Q96NT1 182 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 STRBPQ96SI9 672 aaKnown RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 RTEL1Q9NZ71 1219 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 ORC3Q9UBD5 711 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 ARAP2Q8WZ64 1704 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 MYH3P11055 1940 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 CCDC196A0A1B0GTZ2 297 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 A0A1W2PQ27 194 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 A0A1W2PQ64 194 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 TCRBV5S4A2TA0A5A2 114 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 OFD1O75665 1012 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 ADCY5O95622 1261 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 TPM2P07951 284 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
TMEM116-209ENST00000550020 LIFRP42702 1097 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 NT5C2P49902 561 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 METAP2P50579 478 aaKnown RBP eCLIP10.43□□□□□ -0.74
TMEM116-209ENST00000550020 TYRO3Q06418 890 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 PPP2R5BQ15173 497 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 ZRSR1Q15695 479 aaKnown RBP10.43□□□□□ -0.74
TMEM116-209ENST00000550020 VPS72Q15906 364 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 NFXL1Q6ZNB6 911 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 MFSD6Q6ZSS7 791 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 MAGEB6Q8N7X4 407 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 ACSBG1Q96GR2 724 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 NAT10Q9H0A0 1025 aaKnown RBP10.43□□□□□ -0.74
TMEM116-209ENST00000550020 LRP2BPQ9P2M1 347 aa10.43□□□□□ -0.74
TMEM116-209ENST00000550020 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.43□□□□□ -0.74
TMEM116-209ENST00000550020 NUP98P52948 1817 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 STK36Q9NRP7 1315 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 CCDC69A6NI79 296 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 SH2B2O14492 632 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-209ENST00000550020 FOXP2O15409 715 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 ZBTB43O43298 467 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 MBD4O95243 580 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 LIG1P18858 919 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 ME1P48163 572 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 TDO2P48775 406 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 FAM160A1Q05DH4 1040 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 ITPK1Q13572 414 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 GNL2Q13823 731 aaKnown RBP10.42□□□□□ -0.74
TMEM116-209ENST00000550020 RASGRF1Q13972 1273 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 SLFNL1Q499Z3 407 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 TPRNQ4KMQ1 711 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 SLC10A5Q5PT55 438 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 AKNAD1Q5T1N1 836 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 FAM173BQ6P4H8 233 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 PI16Q6UXB8 463 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-209ENST00000550020 SGMS1Q86VZ5 419 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 CCAR1Q8IX12 1150 aaKnown RBP10.42□□□□□ -0.74
TMEM116-209ENST00000550020 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 FBXO18Q8NFZ0 1043 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 ANKRD2Q9GZV1 360 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 NCOA5Q9HCD5 579 aaKnown RBP10.42□□□□□ -0.74
TMEM116-209ENST00000550020 POLR3EQ9NVU0 708 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 BSDC1Q9NW68 430 aaPredicted RBP10.42□□□□□ -0.74
TMEM116-209ENST00000550020 DENND2AQ9ULE3 1009 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 SLC12A7Q9Y666 1083 aa10.42□□□□□ -0.74
TMEM116-209ENST00000550020 PDS5AQ29RF7 1337 aaKnown RBP10.41□□□□□ -0.74
TMEM116-209ENST00000550020 GOLGA6L19H0YKK7 550 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 ZBTB22O15209 634 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 ANTXR2P58335 489 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 CHRNDQ07001 517 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 COL9A3Q14050 684 aaPredicted RBP10.41□□□□□ -0.74
TMEM116-209ENST00000550020 DHX8Q14562 1220 aaKnown RBP10.41□□□□□ -0.74
TMEM116-209ENST00000550020 STK38Q15208 465 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 SAFBQ15424 915 aaKnown RBP eCLIP10.41□□□□□ -0.74
TMEM116-209ENST00000550020 STX1AQ16623 288 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 TMEM67Q5HYA8 995 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 ADALQ6DHV7 355 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 CHST3Q7LGC8 479 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 VPS37DQ86XT2 251 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 TRIM22Q8IYM9 498 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 HELBQ8NG08 1087 aaPredicted RBP10.41□□□□□ -0.74
TMEM116-209ENST00000550020 STAG1Q8WVM7 1258 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 MRPS27Q92552 414 aaKnown RBP10.41□□□□□ -0.74
TMEM116-209ENST00000550020 SLC4A4Q9Y6R1 1079 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 LAMB2P55268 1798 aa10.41□□□□□ -0.74
TMEM116-209ENST00000550020 ZNF804BA4D1E1 1349 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 FAM177BA6PVY3 158 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 GOLGA8AA7E2F4 631 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.74
TMEM116-209ENST00000550020 RPS6KA4O75676 772 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 ADD1P35611 737 aaKnown RBP10.4□□□□□ -0.74
TMEM116-209ENST00000550020 IARSP41252 1262 aaKnown RBP10.4□□□□□ -0.74
TMEM116-209ENST00000550020 TPM4P67936 248 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 CAMK4Q16566 473 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 APOA5Q6Q788 366 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 TBC1D10CQ8IV04 446 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 NGLY1Q96IV0 654 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 PGBD1Q96JS3 809 aa10.4□□□□□ -0.74
TMEM116-209ENST00000550020 NOL10Q9BSC4 688 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms