RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 TNFAIP1Q13829 316 aa19.44■□□□□ 0.7
RAB5C-205ENST00000550013 OPTNQ96CV9 577 aa19.44■□□□□ 0.7
RAB5C-205ENST00000550013 UTYO14607 1347 aa19.44■□□□□ 0.7
RAB5C-205ENST00000550013 MROH5Q6ZUA9 1318 aa19.44■□□□□ 0.7
RAB5C-205ENST00000550013 CENPFP49454 3210 aa19.44■□□□□ 0.7
RAB5C-205ENST00000550013 LRRC24Q50LG9 513 aa19.43■□□□□ 0.7
RAB5C-205ENST00000550013 FBXO33Q7Z6M2 555 aa19.43■□□□□ 0.7
RAB5C-205ENST00000550013 ANKRD44Q8N8A2 993 aa19.43■□□□□ 0.7
RAB5C-205ENST00000550013 CD99L2Q8TCZ2 262 aa19.43■□□□□ 0.7
RAB5C-205ENST00000550013 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
RAB5C-205ENST00000550013 TMEM39BQ9GZU3 492 aa19.43■□□□□ 0.7
RAB5C-205ENST00000550013 TESPA1A2RU30 521 aaPredicted RBP19.42■□□□□ 0.7
RAB5C-205ENST00000550013 RABL6Q3YEC7 729 aaPredicted RBP19.42■□□□□ 0.7
RAB5C-205ENST00000550013 METTL24Q5JXM2 366 aa19.42■□□□□ 0.7
RAB5C-205ENST00000550013 OTUD7BQ6GQQ9 843 aa19.42■□□□□ 0.7
RAB5C-205ENST00000550013 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.42■□□□□ 0.7
RAB5C-205ENST00000550013 VPS37DQ86XT2 251 aa19.42■□□□□ 0.7
RAB5C-205ENST00000550013 CAP1Q01518 475 aa19.41■□□□□ 0.7
RAB5C-205ENST00000550013 MRPL50Q8N5N7 158 aaKnown RBP19.41■□□□□ 0.7
RAB5C-205ENST00000550013 KLHDC4Q8TBB5 520 aa19.41■□□□□ 0.7
RAB5C-205ENST00000550013 ERO1AQ96HE7 468 aa19.41■□□□□ 0.7
RAB5C-205ENST00000550013 MS4A4AQ96JQ5 239 aa19.41■□□□□ 0.7
RAB5C-205ENST00000550013 ZNF521Q96K83 1311 aa19.41■□□□□ 0.7
RAB5C-205ENST00000550013 KIAA0100Q14667 2235 aaKnown RBP19.41■□□□□ 0.7
RAB5C-205ENST00000550013 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
RAB5C-205ENST00000550013 CACNB3P54284 484 aa19.4■□□□□ 0.7
RAB5C-205ENST00000550013 VGLL2Q8N8G2 317 aa19.4■□□□□ 0.7
RAB5C-205ENST00000550013 BRI3BPQ8WY22 251 aa19.4■□□□□ 0.7
RAB5C-205ENST00000550013 MKI67P46013 3256 aaKnown RBP19.4■□□□□ 0.7
RAB5C-205ENST00000550013 POTEFA5A3E0 1075 aa19.39■□□□□ 0.69
RAB5C-205ENST00000550013 FRAT2O75474 233 aaPredicted RBP19.39■□□□□ 0.69
RAB5C-205ENST00000550013 TNNI2P48788 182 aa19.39■□□□□ 0.69
RAB5C-205ENST00000550013 VGLL4Q14135 290 aa19.39■□□□□ 0.69
RAB5C-205ENST00000550013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.39■□□□□ 0.69
RAB5C-205ENST00000550013 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.69
RAB5C-205ENST00000550013 BCAMP50895 628 aa19.38■□□□□ 0.69
RAB5C-205ENST00000550013 MAP3K9P80192 1104 aa19.38■□□□□ 0.69
RAB5C-205ENST00000550013 SP3Q02447 781 aa19.38■□□□□ 0.69
RAB5C-205ENST00000550013 CAVIN4Q5BKX8 364 aa19.38■□□□□ 0.69
RAB5C-205ENST00000550013 RBBP6Q7Z6E9 1792 aaKnown RBP19.38■□□□□ 0.69
RAB5C-205ENST00000550013 TBC1D22AQ8WUA7 517 aa19.38■□□□□ 0.69
RAB5C-205ENST00000550013 EFCC1Q9HA90 598 aa19.38■□□□□ 0.69
RAB5C-205ENST00000550013 MYH13Q9UKX3 1938 aa19.37■□□□□ 0.69
RAB5C-205ENST00000550013 PDE8BO95263 885 aa19.37■□□□□ 0.69
RAB5C-205ENST00000550013 HDLBPQ00341 1268 aaKnown RBP19.37■□□□□ 0.69
RAB5C-205ENST00000550013 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
RAB5C-205ENST00000550013 OTUD5Q96G74 571 aa19.37■□□□□ 0.69
RAB5C-205ENST00000550013 CCL15-CCL14A0A0B4J2E2 113 aa19.36■□□□□ 0.69
RAB5C-205ENST00000550013 CCL15Q16663 113 aa19.36■□□□□ 0.69
RAB5C-205ENST00000550013 INTS3Q68E01 1043 aaKnown RBP19.36■□□□□ 0.69
RAB5C-205ENST00000550013 USP44Q9H0E7 712 aa19.36■□□□□ 0.69
RAB5C-205ENST00000550013 CSADQ9Y600 493 aa19.36■□□□□ 0.69
RAB5C-205ENST00000550013 PTPRCP08575 1304 aa19.35■□□□□ 0.69
RAB5C-205ENST00000550013 GTF2A2P52657 109 aa19.35■□□□□ 0.69
RAB5C-205ENST00000550013 TAF1CQ15572 869 aaPredicted RBP19.35■□□□□ 0.69
RAB5C-205ENST00000550013 FAM43AQ8N2R8 423 aa19.35■□□□□ 0.69
RAB5C-205ENST00000550013 SSH1Q8WYL5 1049 aa19.35■□□□□ 0.69
RAB5C-205ENST00000550013 ZDHHC15Q96MV8 337 aa19.35■□□□□ 0.69
RAB5C-205ENST00000550013 FGFR2P21802 821 aa19.34■□□□□ 0.69
RAB5C-205ENST00000550013 APOBEC3HQ6NTF7 200 aaKnown RBP19.34■□□□□ 0.69
RAB5C-205ENST00000550013 ARMC5Q96C12 935 aa19.34■□□□□ 0.69
RAB5C-205ENST00000550013 SNCAIPQ9Y6H5 919 aa19.34■□□□□ 0.69
RAB5C-205ENST00000550013 BRCA2P51587 3418 aa19.34■□□□□ 0.69
RAB5C-205ENST00000550013 ZSWIM8A7E2V4 1837 aa19.34■□□□□ 0.69
RAB5C-205ENST00000550013 SPDYE5A6NIY4 337 aa19.33■□□□□ 0.68
RAB5C-205ENST00000550013 PUM3Q15397 648 aaKnown RBP19.33■□□□□ 0.68
RAB5C-205ENST00000550013 ZKSCAN4Q969J2 545 aaPredicted RBP19.33■□□□□ 0.68
RAB5C-205ENST00000550013 WRNIP1Q96S55 665 aa19.33■□□□□ 0.68
RAB5C-205ENST00000550013 ZFYVE28Q9HCC9 887 aa19.33■□□□□ 0.68
RAB5C-205ENST00000550013 TMOD2Q9NZR1 351 aa19.33■□□□□ 0.68
RAB5C-205ENST00000550013 PCDH10Q9P2E7 1040 aa19.33■□□□□ 0.68
RAB5C-205ENST00000550013 KIF16BQ96L93 1317 aa19.32■□□□□ 0.68
RAB5C-205ENST00000550013 IFIT1P09914 478 aaKnown RBP19.32■□□□□ 0.68
RAB5C-205ENST00000550013 RFX5P48382 616 aaPredicted RBP19.32■□□□□ 0.68
RAB5C-205ENST00000550013 FAM83AQ86UY5 434 aa19.32■□□□□ 0.68
RAB5C-205ENST00000550013 MRIQ9BWK5 157 aa19.32■□□□□ 0.68
RAB5C-205ENST00000550013 MAST3O60307 1309 aa19.31■□□□□ 0.68
RAB5C-205ENST00000550013 EYA2O00167 538 aa19.31■□□□□ 0.68
RAB5C-205ENST00000550013 EN2P19622 333 aaPredicted RBP19.31■□□□□ 0.68
RAB5C-205ENST00000550013 FKBP1CQ5VVH2 108 aa19.31■□□□□ 0.68
RAB5C-205ENST00000550013 SUGT1Q9Y2Z0 365 aa19.31■□□□□ 0.68
RAB5C-205ENST00000550013 PTCH2Q9Y6C5 1203 aa19.31■□□□□ 0.68
RAB5C-205ENST00000550013 AK9Q5TCS8 1911 aa19.31■□□□□ 0.68
RAB5C-205ENST00000550013 E9PSI1 815 aa19.3■□□□□ 0.68
RAB5C-205ENST00000550013 ZEB1P37275 1124 aaPredicted RBP19.3■□□□□ 0.68
RAB5C-205ENST00000550013 HHIPL2Q6UWX4 724 aa19.3■□□□□ 0.68
RAB5C-205ENST00000550013 ERO1BQ86YB8 467 aa19.3■□□□□ 0.68
RAB5C-205ENST00000550013 BTBD19C9JJ37 291 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 IRF6O14896 467 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 CETPP11597 493 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 SLC5A1P13866 664 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 MIGA2Q7L4E1 593 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 ATG9AQ7Z3C6 839 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 ZNF333Q96JL9 665 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 ARHGAP39Q9C0H5 1083 aa19.29■□□□□ 0.68
RAB5C-205ENST00000550013 RPAP1Q9BWH6 1393 aaPredicted RBP19.29■□□□□ 0.68
RAB5C-205ENST00000550013 SLFN5Q08AF3 891 aa19.28■□□□□ 0.68
RAB5C-205ENST00000550013 PPIL2Q13356 520 aa19.28■□□□□ 0.68
RAB5C-205ENST00000550013 LPIN2Q92539 896 aa19.28■□□□□ 0.68
RAB5C-205ENST00000550013 HOOK2Q96ED9 719 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms