RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 MED14O60244 1454 aa4.67□□□□□ -1.66
RAB5B-207ENST00000549915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.67□□□□□ -1.66
RAB5B-207ENST00000549915 K7ELQ4 463 aaPredicted RBP4.66□□□□□ -1.66
RAB5B-207ENST00000549915 C2CD2LO14523 706 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 NCLP19338 710 aaKnown RBP4.66□□□□□ -1.66
RAB5B-207ENST00000549915 ARSDP51689 593 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 MFAP1P55081 439 aaKnown RBP4.66□□□□□ -1.66
RAB5B-207ENST00000549915 NUCB2P80303 420 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 C11orf91Q3C1V1 193 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 SH3PXD2AQ5TCZ1 1133 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 CHSY3Q70JA7 882 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 SYT9Q86SS6 491 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 DZIP1LQ8IYY4 767 aaKnown RBP4.66□□□□□ -1.66
RAB5B-207ENST00000549915 CLP1Q92989 425 aaKnown RBP4.66□□□□□ -1.66
RAB5B-207ENST00000549915 PDLIM2Q96JY6 352 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 NOL7Q9UMY1 257 aaKnown RBP4.66□□□□□ -1.66
RAB5B-207ENST00000549915 FANCAO15360 1455 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 ZFYVE16Q7Z3T8 1539 aa4.66□□□□□ -1.66
RAB5B-207ENST00000549915 NOS1P29475 1434 aa4.65□□□□□ -1.66
RAB5B-207ENST00000549915 NSD3Q9BZ95 1437 aa4.65□□□□□ -1.66
RAB5B-207ENST00000549915 PPRC1Q5VV67 1664 aaKnown RBP4.65□□□□□ -1.66
RAB5B-207ENST00000549915 IPO8O15397 1037 aaKnown RBP4.65□□□□□ -1.67
RAB5B-207ENST00000549915 RLBP1P12271 317 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 DGKGP49619 791 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 NUCB1Q02818 461 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 PDE4CQ08493 712 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 UTP14CQ5TAP6 766 aaKnown RBP4.65□□□□□ -1.67
RAB5B-207ENST00000549915 HSH2DQ96JZ2 352 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 BTBD6Q96KE9 485 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 CCDC39Q9UFE4 941 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 MTMR7Q9Y216 660 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 CDC42BPGQ6DT37 1551 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 PIK3R4Q99570 1358 aa4.65□□□□□ -1.67
RAB5B-207ENST00000549915 PLCH2O75038 1416 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 PPIP5K1Q6PFW1 1433 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ASXL2Q76L83 1435 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ADGRB3O60242 1522 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 EFCAB6Q5THR3 1501 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 LMTK2Q8IWU2 1503 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.64□□□□□ -1.67
RAB5B-207ENST00000549915 SHISA8B8ZZ34 492 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 MBD3O95983 291 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 BRD2P25440 801 aaKnown RBP4.64□□□□□ -1.67
RAB5B-207ENST00000549915 RIPK4P57078 832 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 DGKZQ13574 1117 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 CCINQ13939 588 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 RABEP1Q15276 862 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ALDH1L2Q3SY69 923 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 C16orf46Q6P387 395 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 SASS6Q6UVJ0 657 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ATF7IPQ6VMQ6 1270 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ILDR2Q71H61 639 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 FCHSD1Q86WN1 690 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 GAS2L3Q86XJ1 694 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 TCP11L2Q8N4U5 519 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ABTB2Q8N961 1025 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 GCC1Q96CN9 775 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 CWC22Q9HCG8 908 aaKnown RBP4.64□□□□□ -1.67
RAB5B-207ENST00000549915 PRDM6Q9NQX0 595 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ZMIZ1Q9ULJ6 1067 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 ZKSCAN5Q9Y2L8 839 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 QRICH2Q9H0J4 1663 aa4.64□□□□□ -1.67
RAB5B-207ENST00000549915 PTCH1Q13635 1447 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 KIF1BO60333 1816 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 UQCRHLA0A096LP55 91 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 MAP3K6O95382 1288 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 BAG4O95429 457 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 CYP2E1P05181 493 aaPredicted RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 RPLP1P05386 114 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 UQCRHP07919 91 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 ADH7P40394 386 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 IDH3AP50213 366 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 PCBP4P57723 403 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 SRPK2P78362 688 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 HMGN5P82970 282 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 SFSWAPQ12872 951 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 PRRT3Q5FWE3 981 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 MORC1Q86VD1 984 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 CHD1LQ86WJ1 897 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 PRIMPOLQ96LW4 560 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 QTRT2Q9H974 415 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 STRN4Q9NRL3 753 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 SMC4Q9NTJ3 1288 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 ZBTB40Q9NUA8 1239 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 CXXC1Q9P0U4 656 aaPredicted RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 PRDM4Q9UKN5 801 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 DDX49Q9Y6V7 483 aaKnown RBP4.63□□□□□ -1.67
RAB5B-207ENST00000549915 KIF24Q5T7B8 1368 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 ANKRD36BQ8N2N9 1353 aa4.63□□□□□ -1.67
RAB5B-207ENST00000549915 COL3A1P02461 1466 aaPredicted RBP4.62□□□□□ -1.67
RAB5B-207ENST00000549915 FRMPD1Q5SYB0 1578 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 ABCA9Q8IUA7 1624 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 CDC45O75419 566 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 TRIM27P14373 513 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 INPP5BP32019 993 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 TNNT2P45379 298 aaPredicted RBP4.62□□□□□ -1.67
RAB5B-207ENST00000549915 OCLNQ16625 522 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 ZNF280CQ8ND82 737 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 BHMTQ93088 406 aa4.62□□□□□ -1.67
RAB5B-207ENST00000549915 IFT43Q96FT9 208 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms