RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 ZKSCAN2Q63HK3 967 aa23.2■■□□□ 1.3
CHMP1A-207ENST00000549328 VEZTQ9HBM0 779 aa23.2■■□□□ 1.3
CHMP1A-207ENST00000549328 ZNF70Q9UC06 446 aaPredicted RBP23.2■■□□□ 1.3
CHMP1A-207ENST00000549328 PA2G4Q9UQ80 394 aaKnown RBP23.2■■□□□ 1.3
CHMP1A-207ENST00000549328 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
CHMP1A-207ENST00000549328 PPP1R12BO60237 982 aaPredicted RBP23.19■■□□□ 1.3
CHMP1A-207ENST00000549328 RASA3Q14644 834 aa23.19■■□□□ 1.3
CHMP1A-207ENST00000549328 GRIK5Q16478 980 aa23.19■■□□□ 1.3
CHMP1A-207ENST00000549328 MAP3K11Q16584 847 aa23.19■■□□□ 1.3
CHMP1A-207ENST00000549328 WDR66Q8TBY9 1149 aa23.19■■□□□ 1.3
CHMP1A-207ENST00000549328 CLUAP1Q96AJ1 413 aa23.19■■□□□ 1.3
CHMP1A-207ENST00000549328 MAST3O60307 1309 aa23.18■■□□□ 1.3
CHMP1A-207ENST00000549328 UNCXA6NJT0 531 aa23.18■■□□□ 1.3
CHMP1A-207ENST00000549328 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
CHMP1A-207ENST00000549328 TEKT1Q969V4 418 aa23.18■■□□□ 1.3
CHMP1A-207ENST00000549328 TDRD3Q9H7E2 651 aaKnown RBP23.18■■□□□ 1.3
CHMP1A-207ENST00000549328 ANGEL1Q9UNK9 670 aaKnown RBP23.18■■□□□ 1.3
CHMP1A-207ENST00000549328 TNNQ9UQP3 1299 aa23.18■■□□□ 1.3
CHMP1A-207ENST00000549328 ZBTB22O15209 634 aa23.17■■□□□ 1.3
CHMP1A-207ENST00000549328 GNAI2P04899 355 aa23.17■■□□□ 1.3
CHMP1A-207ENST00000549328 PRKG1Q13976 671 aa23.17■■□□□ 1.3
CHMP1A-207ENST00000549328 GNL3LQ9NVN8 582 aaKnown RBP23.17■■□□□ 1.3
CHMP1A-207ENST00000549328 RNF186Q9NXI6 227 aa23.17■■□□□ 1.3
CHMP1A-207ENST00000549328 NBPF12Q5TAG4 269 aaPredicted RBP23.16■■□□□ 1.3
CHMP1A-207ENST00000549328 ZDHHC15Q96MV8 337 aa23.16■■□□□ 1.3
CHMP1A-207ENST00000549328 SEMA3EO15041 775 aa23.15■■□□□ 1.3
CHMP1A-207ENST00000549328 TRPA1O75762 1119 aa23.15■■□□□ 1.3
CHMP1A-207ENST00000549328 CAPN15O75808 1086 aa23.15■■□□□ 1.3
CHMP1A-207ENST00000549328 HHIPL2Q6UWX4 724 aa23.15■■□□□ 1.3
CHMP1A-207ENST00000549328 AKAP11Q9UKA4 1901 aa23.15■■□□□ 1.3
CHMP1A-207ENST00000549328 TM4SF4P48230 202 aa23.14■■□□□ 1.29
CHMP1A-207ENST00000549328 TNNI2P48788 182 aa23.14■■□□□ 1.29
CHMP1A-207ENST00000549328 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.29
CHMP1A-207ENST00000549328 SSC5DA1L4H1 1573 aa23.14■■□□□ 1.29
CHMP1A-207ENST00000549328 SLC10A4Q96EP9 437 aa23.13■■□□□ 1.29
CHMP1A-207ENST00000549328 DENND2AQ9ULE3 1009 aa23.13■■□□□ 1.29
CHMP1A-207ENST00000549328 AKAP2Q9Y2D5 859 aa23.13■■□□□ 1.29
CHMP1A-207ENST00000549328 IREB2P48200 963 aaKnown RBP23.12■■□□□ 1.29
CHMP1A-207ENST00000549328 FKBP1CQ5VVH2 108 aa23.12■■□□□ 1.29
CHMP1A-207ENST00000549328 SPRYD7Q5W111 196 aa23.12■■□□□ 1.29
CHMP1A-207ENST00000549328 TEPSINQ96N21 525 aa23.12■■□□□ 1.29
CHMP1A-207ENST00000549328 FZD1Q9UP38 647 aa23.12■■□□□ 1.29
CHMP1A-207ENST00000549328 CASP8AP2Q9UKL3 1982 aa23.12■■□□□ 1.29
CHMP1A-207ENST00000549328 SALL1Q9NSC2 1324 aa23.11■■□□□ 1.29
CHMP1A-207ENST00000549328 TCP10L2B9ZVM9 353 aa23.11■■□□□ 1.29
CHMP1A-207ENST00000549328 USP2O75604 605 aaPredicted RBP23.11■■□□□ 1.29
CHMP1A-207ENST00000549328 PHKA1P46020 1223 aa23.11■■□□□ 1.29
CHMP1A-207ENST00000549328 SREBF2Q12772 1141 aa23.11■■□□□ 1.29
CHMP1A-207ENST00000549328 APOBEC3HQ6NTF7 200 aaKnown RBP23.11■■□□□ 1.29
CHMP1A-207ENST00000549328 MYH13Q9UKX3 1938 aa23.11■■□□□ 1.29
CHMP1A-207ENST00000549328 TIMM10P62072 90 aa23.1■■□□□ 1.29
CHMP1A-207ENST00000549328 TFCP2Q12800 502 aa23.1■■□□□ 1.29
CHMP1A-207ENST00000549328 CCDC102BQ68D86 513 aa23.1■■□□□ 1.29
CHMP1A-207ENST00000549328 FTSJ3Q8IY81 847 aaKnown RBP23.1■■□□□ 1.29
CHMP1A-207ENST00000549328 TMOD2Q9NZR1 351 aa23.1■■□□□ 1.29
CHMP1A-207ENST00000549328 PNMA6EA0A0J9YXQ4 647 aa23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 A0A1B0GUL7 405 aa23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 ZBTB48P10074 688 aaPredicted RBP23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 INHBEP58166 350 aa23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 FAM83AQ86UY5 434 aa23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 ANKRD13AQ8IZ07 590 aa23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 ABHD8Q96I13 439 aa23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 TMEM39BQ9GZU3 492 aa23.09■■□□□ 1.29
CHMP1A-207ENST00000549328 LDHBP07195 334 aaKnown RBP23.08■■□□□ 1.29
CHMP1A-207ENST00000549328 ADORA1P30542 326 aa23.08■■□□□ 1.29
CHMP1A-207ENST00000549328 MKRN3Q13064 507 aaKnown RBP23.08■■□□□ 1.29
CHMP1A-207ENST00000549328 ZGPATQ8N5A5 531 aaKnown RBP23.08■■□□□ 1.29
CHMP1A-207ENST00000549328 CLMNQ96JQ2 1002 aa23.08■■□□□ 1.29
CHMP1A-207ENST00000549328 PDS5AQ29RF7 1337 aaKnown RBP23.08■■□□□ 1.28
CHMP1A-207ENST00000549328 PRDX5P30044 214 aa23.07■■□□□ 1.28
CHMP1A-207ENST00000549328 G3BP1Q13283 466 aaKnown RBP eCLIP23.07■■□□□ 1.28
CHMP1A-207ENST00000549328 MVPQ14764 893 aaKnown RBP23.07■■□□□ 1.28
CHMP1A-207ENST00000549328 XAGE2Q96GT9 111 aa23.07■■□□□ 1.28
CHMP1A-207ENST00000549328 MANSC4A6NHS7 340 aaPredicted RBP23.06■■□□□ 1.28
CHMP1A-207ENST00000549328 WNK4Q96J92 1243 aa23.06■■□□□ 1.28
CHMP1A-207ENST00000549328 ZBTB7BO15156 539 aaPredicted RBP23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 RLBP1P12271 317 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 CACNB3P54284 484 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 POLA2Q14181 598 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 CDAN1Q8IWY9 1227 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 SSH3Q8TE77 659 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 HOOK2Q96ED9 719 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 CFHR5Q9BXR6 569 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 MCOLN1Q9GZU1 580 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 DAGLAQ9Y4D2 1042 aa23.05■■□□□ 1.28
CHMP1A-207ENST00000549328 ALDH1A1P00352 501 aa23.04■■□□□ 1.28
CHMP1A-207ENST00000549328 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
CHMP1A-207ENST00000549328 DIXDC1Q155Q3 683 aa23.04■■□□□ 1.28
CHMP1A-207ENST00000549328 NOM1Q5C9Z4 860 aaKnown RBP23.04■■□□□ 1.28
CHMP1A-207ENST00000549328 ITPRIPQ8IWB1 547 aa23.04■■□□□ 1.28
CHMP1A-207ENST00000549328 NEUROD6Q96NK8 337 aa23.04■■□□□ 1.28
CHMP1A-207ENST00000549328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.04■■□□□ 1.28
CHMP1A-207ENST00000549328 DGKZQ13574 1117 aa23.03■■□□□ 1.28
CHMP1A-207ENST00000549328 RPAP1Q9BWH6 1393 aaPredicted RBP23.02■■□□□ 1.28
CHMP1A-207ENST00000549328 TBC1D8O95759 1140 aa23.02■■□□□ 1.28
CHMP1A-207ENST00000549328 MAP3K9P80192 1104 aa23.02■■□□□ 1.28
CHMP1A-207ENST00000549328 SPTY2D1Q68D10 685 aaPredicted RBP23.02■■□□□ 1.28
CHMP1A-207ENST00000549328 CDC42EP5Q6NZY7 148 aa23.02■■□□□ 1.28
CHMP1A-207ENST00000549328 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms