RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 FPGT-TNNI3KV9GXZ4 949 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 MYPNQ86TC9 1320 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 PDE8BO95263 885 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 CSB-PGBD3P0DP91 1061 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 GSPT1P15170 499 aaKnown RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 CCDC146Q8IYE0 955 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 DDX17Q92841 729 aaKnown RBP5.99□□□□□ -1.45
SCAF11-212ENST00000549162 MTFR1LQ9H019 292 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 PNMA2Q9UL42 364 aa5.99□□□□□ -1.45
SCAF11-212ENST00000549162 SGSM2O43147 1006 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 SNHG28P0DPA3 235 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 SGMS1Q86VZ5 419 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 RHPN1Q8TCX5 695 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 ADAMTS19Q8TE59 1207 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 PHOX2BQ99453 314 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 NLRP2Q9NX02 1062 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 XDHP47989 1333 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 CDC45O75419 566 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 HOXC6P09630 235 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 ABL2P42684 1182 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 EXOSC10Q01780 885 aaKnown RBP5.98□□□□□ -1.45
SCAF11-212ENST00000549162 CCDC152Q4G0S7 254 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 MPRIPQ6WCQ1 1025 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 MKL1Q969V6 931 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 MRRFQ96E11 262 aaKnown RBP5.98□□□□□ -1.45
SCAF11-212ENST00000549162 LRRCC1Q9C099 1032 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 COA1Q9GZY4 146 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 MAP3K20Q9NYL2 800 aaKnown RBP5.98□□□□□ -1.45
SCAF11-212ENST00000549162 MDM2Q00987 491 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-212ENST00000549162 GABPAQ06546 454 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 NEXNQ0ZGT2 675 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 C20orf194Q5TEA3 1177 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 DNAJC10Q8IXB1 793 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 DAGLBQ8NCG7 672 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 TBC1D22AQ8WUA7 517 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 ANTXR1Q9H6X2 564 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 ZBTB1Q9Y2K1 713 aa5.98□□□□□ -1.45
SCAF11-212ENST00000549162 FZD9O00144 591 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 ALDH1B1P30837 517 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 DDR1Q08345 913 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 DSG2Q14126 1118 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 ZNF827Q17R98 1081 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 MYSM1Q5VVJ2 828 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 KBTBD3Q8NAB2 608 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 MASTLQ96GX5 879 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 ATP8B3O60423 1300 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 SMARCA5O60264 1052 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-212ENST00000549162 SSTR3P32745 418 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-212ENST00000549162 ECM1Q16610 540 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 COBLL1Q53SF7 1204 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 SUSD4Q5VX71 490 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 MCTP2Q6DN12 878 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 PRR5LQ6MZQ0 368 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 ZSCAN25Q6NSZ9 544 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 BANK1Q8NDB2 785 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 AGBL3Q8NEM8 1001 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 C12orf42Q96LP6 360 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 ZC3H6P61129 1189 aaKnown RBP5.97□□□□□ -1.45
SCAF11-212ENST00000549162 COPS6Q7L5N1 327 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 STAG1Q8WVM7 1258 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 DPF2Q92785 391 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 UPF1Q92900 1129 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCAF11-212ENST00000549162 MEIS3Q99687 375 aa5.97□□□□□ -1.45
SCAF11-212ENST00000549162 PHAXQ9H814 394 aaKnown RBP5.97□□□□□ -1.45
SCAF11-212ENST00000549162 GPR75-ASB3A0A0A6YYF3 556 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 PI4KAP2A4QPH2 592 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 ERC2O15083 957 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 PTMSP20962 102 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 PRIM1P49642 420 aaKnown RBP5.96□□□□□ -1.45
SCAF11-212ENST00000549162 PI4KAP1Q8N8J0 262 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 SMARCC2Q8TAQ2 1214 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 CWC22Q9HCG8 908 aaKnown RBP5.96□□□□□ -1.45
SCAF11-212ENST00000549162 ZSWIM6Q9HCJ5 1215 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 GPCPD1Q9NPB8 672 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 ECHDC1Q9NTX5 307 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 TBC1D2BQ9UPU7 963 aa5.96□□□□□ -1.45
SCAF11-212ENST00000549162 VIL1P09327 827 aaKnown RBP5.96□□□□□ -1.46
SCAF11-212ENST00000549162 UBTFL1P0CB47 393 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-212ENST00000549162 PTGDRQ13258 359 aa5.96□□□□□ -1.46
SCAF11-212ENST00000549162 FAM83AQ86UY5 434 aa5.96□□□□□ -1.46
SCAF11-212ENST00000549162 DZIP3Q86Y13 1208 aaKnown RBP5.96□□□□□ -1.46
SCAF11-212ENST00000549162 USP26Q9BXU7 913 aa5.96□□□□□ -1.46
SCAF11-212ENST00000549162 EVA1CP58658 441 aa5.96□□□□□ -1.46
SCAF11-212ENST00000549162 PPP1R18Q6NYC8 613 aa5.96□□□□□ -1.46
SCAF11-212ENST00000549162 EXOC6Q8TAG9 804 aa5.96□□□□□ -1.46
SCAF11-212ENST00000549162 CABLES1Q8TDN4 633 aa5.96□□□□□ -1.46
SCAF11-212ENST00000549162 RBM17Q96I25 401 aaKnown RBP5.96□□□□□ -1.46
SCAF11-212ENST00000549162 ADD2P35612 726 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 EPHA10Q5JZY3 1008 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 FAM9BQ8IZU0 186 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 RIOK1Q9BRS2 568 aaKnown RBP5.95□□□□□ -1.46
SCAF11-212ENST00000549162 BICC1Q9H694 974 aaKnown RBP5.95□□□□□ -1.46
SCAF11-212ENST00000549162 DENND2AQ9ULE3 1009 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 RTCBQ9Y3I0 505 aaKnown RBP5.95□□□□□ -1.46
SCAF11-212ENST00000549162 TMEM88BA6NKF7 163 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 ATP2A1O14983 1001 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 ENTPD3O75355 529 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 CHMLP26374 656 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 CLCN1P35523 988 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 CHRNA2Q15822 529 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms