RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 EFCC1Q9HA90 598 aa15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 PCDH10Q9P2E7 1040 aa15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 PTPN22Q9Y2R2 807 aa15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 FAM205AQ6ZU69 1335 aa15.11■□□□□ 0.01
TRAFD1-205ENST00000548277 MYCP01106 439 aaPredicted RBP15.1■□□□□ 0.01
TRAFD1-205ENST00000548277 NBPF7P0C2Y1 421 aaPredicted RBP15.1■□□□□ 0.01
TRAFD1-205ENST00000548277 CRKP46108 304 aa15.1■□□□□ 0.01
TRAFD1-205ENST00000548277 CACNB3P54284 484 aa15.1■□□□□ 0.01
TRAFD1-205ENST00000548277 SP3Q02447 781 aa15.1■□□□□ 0.01
TRAFD1-205ENST00000548277 UBE4AQ14139 1066 aa15.1■□□□□ 0.01
TRAFD1-205ENST00000548277 MYH13Q9UKX3 1938 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 ARAP2Q8WZ64 1704 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 ZSWIM8A7E2V4 1837 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 ANP32CO43423 234 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 EN2P19622 333 aaPredicted RBP15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 TNFAIP1Q13829 316 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 LRRC24Q50LG9 513 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 OTUD5Q96G74 571 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 KAZALD1Q96I82 304 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 SERPINA10Q9UK55 444 aa15.09■□□□□ 0.01
TRAFD1-205ENST00000548277 CCL15-CCL14A0A0B4J2E2 113 aa15.08■□□□□ 0
TRAFD1-205ENST00000548277 UNCXA6NJT0 531 aa15.08■□□□□ 0
TRAFD1-205ENST00000548277 TNNI2P48788 182 aa15.08■□□□□ 0
TRAFD1-205ENST00000548277 MAP3K9P80192 1104 aa15.08■□□□□ 0
TRAFD1-205ENST00000548277 TAF1CQ15572 869 aaPredicted RBP15.08■□□□□ 0
TRAFD1-205ENST00000548277 CCL15Q16663 113 aa15.08■□□□□ 0
TRAFD1-205ENST00000548277 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
TRAFD1-205ENST00000548277 TEPSINQ96N21 525 aa15.08■□□□□ 0
TRAFD1-205ENST00000548277 BICC1Q9H694 974 aaKnown RBP15.08■□□□□ 0
TRAFD1-205ENST00000548277 RIPOR2Q9Y4F9 1068 aa15.08■□□□□ 0
TRAFD1-205ENST00000548277 VGLL4Q14135 290 aa15.07■□□□□ 0
TRAFD1-205ENST00000548277 METTL24Q5JXM2 366 aa15.07■□□□□ 0
TRAFD1-205ENST00000548277 INTS3Q68E01 1043 aaKnown RBP15.07■□□□□ 0
TRAFD1-205ENST00000548277 KLHDC4Q8TBB5 520 aa15.07■□□□□ 0
TRAFD1-205ENST00000548277 BRI3BPQ8WY22 251 aa15.07■□□□□ 0
TRAFD1-205ENST00000548277 MS4A4AQ96JQ5 239 aa15.07■□□□□ 0
TRAFD1-205ENST00000548277 CSADQ9Y600 493 aa15.07■□□□□ 0
TRAFD1-205ENST00000548277 TESPA1A2RU30 521 aaPredicted RBP15.06■□□□□ 0
TRAFD1-205ENST00000548277 BCAMP50895 628 aa15.06■□□□□ 0
TRAFD1-205ENST00000548277 CAVIN4Q5BKX8 364 aa15.06■□□□□ 0
TRAFD1-205ENST00000548277 FBXO33Q7Z6M2 555 aa15.06■□□□□ 0
TRAFD1-205ENST00000548277 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
TRAFD1-205ENST00000548277 ZFYVE28Q9HCC9 887 aa15.06■□□□□ 0
TRAFD1-205ENST00000548277 MROH5Q6ZUA9 1318 aa15.06■□□□□ 0
TRAFD1-205ENST00000548277 RBBP6Q7Z6E9 1792 aaKnown RBP15.06■□□□□ 0
TRAFD1-205ENST00000548277 ZKSCAN4Q969J2 545 aaPredicted RBP15.05■□□□□ -0
TRAFD1-205ENST00000548277 TMEM106CQ9BVX2 250 aa15.05■□□□□ -0
TRAFD1-205ENST00000548277 PTCH2Q9Y6C5 1203 aa15.05■□□□□ -0
TRAFD1-205ENST00000548277 GTF2A2P52657 109 aa15.04■□□□□ -0
TRAFD1-205ENST00000548277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
TRAFD1-205ENST00000548277 TEKT1Q969V4 418 aa15.04■□□□□ -0
TRAFD1-205ENST00000548277 CENPFP49454 3210 aa15.03■□□□□ -0
TRAFD1-205ENST00000548277 PDE8BO95263 885 aa15.03■□□□□ -0
TRAFD1-205ENST00000548277 SLC4A8Q2Y0W8 1093 aa15.03■□□□□ -0
TRAFD1-205ENST00000548277 MIGA2Q7L4E1 593 aa15.03■□□□□ -0
TRAFD1-205ENST00000548277 ANKRD44Q8N8A2 993 aa15.03■□□□□ -0
TRAFD1-205ENST00000548277 WRNIP1Q96S55 665 aa15.03■□□□□ -0
TRAFD1-205ENST00000548277 ARHGAP39Q9C0H5 1083 aa15.03■□□□□ -0
TRAFD1-205ENST00000548277 SLC9C1Q4G0N8 1177 aa15.02■□□□□ -0
TRAFD1-205ENST00000548277 HABP4Q5JVS0 413 aaKnown RBP15.02■□□□□ -0
TRAFD1-205ENST00000548277 MRPL50Q8N5N7 158 aaKnown RBP15.02■□□□□ -0
TRAFD1-205ENST00000548277 TBC1D22AQ8WUA7 517 aa15.02■□□□□ -0
TRAFD1-205ENST00000548277 ARMC5Q96C12 935 aa15.02■□□□□ -0
TRAFD1-205ENST00000548277 GCC1Q96CN9 775 aa15.02■□□□□ -0
TRAFD1-205ENST00000548277 TMOD2Q9NZR1 351 aa15.02■□□□□ -0
TRAFD1-205ENST00000548277 SNCAIPQ9Y6H5 919 aa15.02■□□□□ -0
TRAFD1-205ENST00000548277 BTBD19C9JJ37 291 aa15.01□□□□□ -0.01
TRAFD1-205ENST00000548277 IRF6O14896 467 aa15.01□□□□□ -0.01
TRAFD1-205ENST00000548277 NBPF11Q86T75 865 aa15.01□□□□□ -0.01
TRAFD1-205ENST00000548277 SH3TC2Q8TF17 1288 aa15.01□□□□□ -0.01
TRAFD1-205ENST00000548277 UTYO14607 1347 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 SPDYE5A6NIY4 337 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 IFIT1P09914 478 aaKnown RBP15□□□□□ -0.01
TRAFD1-205ENST00000548277 CETPP11597 493 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 TCP10Q12799 353 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 ARHGEF6Q15052 776 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 RABL6Q3YEC7 729 aaPredicted RBP15□□□□□ -0.01
TRAFD1-205ENST00000548277 APOBEC3HQ6NTF7 200 aaKnown RBP15□□□□□ -0.01
TRAFD1-205ENST00000548277 ERO1BQ86YB8 467 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 VGLL2Q8N8G2 317 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 ZNF333Q96JL9 665 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 ZDHHC15Q96MV8 337 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 MYH2Q9UKX2 1941 aa15□□□□□ -0.01
TRAFD1-205ENST00000548277 WDHD1O75717 1129 aaPredicted RBP14.99□□□□□ -0.01
TRAFD1-205ENST00000548277 INPP5BP32019 993 aa14.99□□□□□ -0.01
TRAFD1-205ENST00000548277 HDLBPQ00341 1268 aaKnown RBP14.99□□□□□ -0.01
TRAFD1-205ENST00000548277 KIF22Q14807 665 aa14.99□□□□□ -0.01
TRAFD1-205ENST00000548277 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
TRAFD1-205ENST00000548277 CPA4Q9UI42 421 aa14.99□□□□□ -0.01
TRAFD1-205ENST00000548277 MKI67P46013 3256 aaKnown RBP14.99□□□□□ -0.01
TRAFD1-205ENST00000548277 MGAMO43451 1857 aa14.98□□□□□ -0.01
TRAFD1-205ENST00000548277 TLR2O60603 784 aa14.98□□□□□ -0.01
TRAFD1-205ENST00000548277 SNAPC2Q13487 334 aa14.98□□□□□ -0.01
TRAFD1-205ENST00000548277 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
TRAFD1-205ENST00000548277 FGFR2P21802 821 aa14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 DIXDC1Q155Q3 683 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms