RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 RASSF10A6NK89 507 aa23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 APOBEC3FQ8IUX4 373 aaKnown RBP23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 TEKT1Q969V4 418 aa23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 EAF2Q96CJ1 260 aaPredicted RBP23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 MRIQ9BWK5 157 aa23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 TLL2Q9Y6L7 1015 aa23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 MAST3O60307 1309 aa23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 PDS5AQ29RF7 1337 aaKnown RBP23.04■■□□□ 1.28
PRPF40B-206ENST00000547764 ARID4AP29374 1257 aaPredicted RBP23.03■■□□□ 1.28
PRPF40B-206ENST00000547764 PRDX5P30044 214 aa23.03■■□□□ 1.28
PRPF40B-206ENST00000547764 DEFB115Q30KQ5 88 aa23.03■■□□□ 1.28
PRPF40B-206ENST00000547764 PRAMEF18Q5VWM3 479 aa23.03■■□□□ 1.28
PRPF40B-206ENST00000547764 SAPCD2Q86UD0 394 aa23.03■■□□□ 1.28
PRPF40B-206ENST00000547764 RHPN1Q8TCX5 695 aa23.03■■□□□ 1.28
PRPF40B-206ENST00000547764 HMG20BQ9P0W2 317 aa23.03■■□□□ 1.28
PRPF40B-206ENST00000547764 LDHBP07195 334 aaKnown RBP23.02■■□□□ 1.28
PRPF40B-206ENST00000547764 CCDC8Q9H0W5 538 aaPredicted RBP23.02■■□□□ 1.28
PRPF40B-206ENST00000547764 TDRD3Q9H7E2 651 aaKnown RBP23.02■■□□□ 1.28
PRPF40B-206ENST00000547764 TLR7Q9NYK1 1049 aaKnown RBP23.02■■□□□ 1.28
PRPF40B-206ENST00000547764 DBNLQ9UJU6 430 aaKnown RBP23.02■■□□□ 1.28
PRPF40B-206ENST00000547764 APBB1O00213 710 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 UQCRFS1P1P0C7P4 283 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 SPDYE2Q495Y8 402 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 CCDC158Q5M9N0 1113 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 HHIPL2Q6UWX4 724 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 PI16Q6UXB8 463 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 ZGPATQ8N5A5 531 aaKnown RBP23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 SPATA5Q8NB90 893 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 ZDHHC15Q96MV8 337 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 CRBNQ96SW2 442 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 VEZTQ9HBM0 779 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 GBA2Q9HCG7 927 aaPredicted RBP23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 IL1RAPL2Q9NP60 686 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 ZNF70Q9UC06 446 aaPredicted RBP23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 ECM29Q5VYK3 1845 aa23.01■■□□□ 1.27
PRPF40B-206ENST00000547764 MCAMP43121 646 aa23■■□□□ 1.27
PRPF40B-206ENST00000547764 TTC39AQ5SRH9 613 aa23■■□□□ 1.27
PRPF40B-206ENST00000547764 C2orf69Q8N8R5 385 aa23■■□□□ 1.27
PRPF40B-206ENST00000547764 JMYQ8N9B5 988 aa23■■□□□ 1.27
PRPF40B-206ENST00000547764 KIF1BPQ96EK5 621 aa23■■□□□ 1.27
PRPF40B-206ENST00000547764 DEFB129Q9H1M3 183 aa23■■□□□ 1.27
PRPF40B-206ENST00000547764 ABCF2Q9UG63 623 aa23■■□□□ 1.27
PRPF40B-206ENST00000547764 RAB11FIP3O75154 756 aa22.99■■□□□ 1.27
PRPF40B-206ENST00000547764 VEGFBP49765 207 aa22.99■■□□□ 1.27
PRPF40B-206ENST00000547764 DIXDC1Q155Q3 683 aa22.99■■□□□ 1.27
PRPF40B-206ENST00000547764 APOBEC3HQ6NTF7 200 aaKnown RBP22.99■■□□□ 1.27
PRPF40B-206ENST00000547764 AACSQ86V21 672 aa22.99■■□□□ 1.27
PRPF40B-206ENST00000547764 ZNF512BQ96KM6 892 aaPredicted RBP22.98■■□□□ 1.27
PRPF40B-206ENST00000547764 PCDHB15Q9Y5E8 787 aa22.98■■□□□ 1.27
PRPF40B-206ENST00000547764 HUNKP57058 714 aa22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 SPTY2D1Q68D10 685 aaPredicted RBP22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 TBC1D9Q6ZT07 1266 aa22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 PAXIP1Q6ZW49 1069 aaPredicted RBP22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 CLASRPQ8N2M8 674 aaKnown RBP22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 HHIPL1Q96JK4 782 aa22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 SNRKQ9NRH2 765 aa22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 DAGLAQ9Y4D2 1042 aa22.97■■□□□ 1.27
PRPF40B-206ENST00000547764 RASA3Q14644 834 aa22.96■■□□□ 1.27
PRPF40B-206ENST00000547764 CYP4F22Q6NT55 531 aa22.96■■□□□ 1.27
PRPF40B-206ENST00000547764 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
PRPF40B-206ENST00000547764 PPP2R3BQ9Y5P8 575 aa22.96■■□□□ 1.27
PRPF40B-206ENST00000547764 NF2P35240 595 aa22.95■■□□□ 1.26
PRPF40B-206ENST00000547764 TNFAIP1Q13829 316 aa22.95■■□□□ 1.26
PRPF40B-206ENST00000547764 DZIP1Q86YF9 867 aaKnown RBP22.95■■□□□ 1.26
PRPF40B-206ENST00000547764 CAPNS2Q96L46 248 aa22.95■■□□□ 1.26
PRPF40B-206ENST00000547764 WDR33Q9C0J8 1336 aaKnown RBP22.95■■□□□ 1.26
PRPF40B-206ENST00000547764 TCP10L2B9ZVM9 353 aa22.94■■□□□ 1.26
PRPF40B-206ENST00000547764 CACNB3P54284 484 aa22.94■■□□□ 1.26
PRPF40B-206ENST00000547764 FKBP1BP68106 108 aa22.94■■□□□ 1.26
PRPF40B-206ENST00000547764 MOB2Q70IA6 237 aa22.94■■□□□ 1.26
PRPF40B-206ENST00000547764 BCL11AQ9H165 835 aa22.94■■□□□ 1.26
PRPF40B-206ENST00000547764 SUPT16HQ9Y5B9 1047 aaKnown RBP22.94■■□□□ 1.26
PRPF40B-206ENST00000547764 AKAP11Q9UKA4 1901 aa22.93■■□□□ 1.26
PRPF40B-206ENST00000547764 ECE1P42892 770 aa22.93■■□□□ 1.26
PRPF40B-206ENST00000547764 MECOMQ03112 1051 aa22.93■■□□□ 1.26
PRPF40B-206ENST00000547764 GRM1Q13255 1194 aa22.93■■□□□ 1.26
PRPF40B-206ENST00000547764 DCTPP1Q9H773 170 aa22.93■■□□□ 1.26
PRPF40B-206ENST00000547764 PCNTO95613 3336 aa22.93■■□□□ 1.26
PRPF40B-206ENST00000547764 IFIT2P09913 472 aaKnown RBP22.92■■□□□ 1.26
PRPF40B-206ENST00000547764 ZAP70P43403 619 aa22.92■■□□□ 1.26
PRPF40B-206ENST00000547764 CDC42EP5Q6NZY7 148 aa22.92■■□□□ 1.26
PRPF40B-206ENST00000547764 ZNF384Q8TF68 577 aa22.92■■□□□ 1.26
PRPF40B-206ENST00000547764 TMOD2Q9NZR1 351 aa22.92■■□□□ 1.26
PRPF40B-206ENST00000547764 RAI14Q9P0K7 980 aa22.92■■□□□ 1.26
PRPF40B-206ENST00000547764 PAPPA2Q9BXP8 1791 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 GAKO14976 1311 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 CYP2E1P05181 493 aaPredicted RBP22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 TNNI2P48788 182 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 TTLL12Q14166 644 aaPredicted RBP22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 SUPT20HL1Q3ZLR7 823 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 NBPF12Q5TAG4 269 aaPredicted RBP22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 RGMBQ6NW40 437 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 SLF2Q8IX21 1173 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 NSUN4Q96CB9 384 aaKnown RBP22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 FAM163AQ96GL9 167 aaPredicted RBP22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 LRRCC1Q9C099 1032 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 LRP2BPQ9P2M1 347 aa22.91■■□□□ 1.26
PRPF40B-206ENST00000547764 MYH2Q9UKX2 1941 aa22.9■■□□□ 1.26
PRPF40B-206ENST00000547764 UBE2Q2LH0YL09 131 aa22.9■■□□□ 1.26
PRPF40B-206ENST00000547764 PRKG1Q13976 671 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms