RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 CEP126Q9P2H0 1117 aa20.18■□□□□ 0.82
CDK4-204ENST00000547281 LRRFIP2Q9Y608 721 aaKnown RBP20.18■□□□□ 0.82
CDK4-204ENST00000547281 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
CDK4-204ENST00000547281 BCAR3O75815 825 aa20.17■□□□□ 0.82
CDK4-204ENST00000547281 FGFR2P21802 821 aa20.17■□□□□ 0.82
CDK4-204ENST00000547281 GRIK5Q16478 980 aa20.17■□□□□ 0.82
CDK4-204ENST00000547281 SPRYD7Q5W111 196 aa20.17■□□□□ 0.82
CDK4-204ENST00000547281 TEKT1Q969V4 418 aa20.17■□□□□ 0.82
CDK4-204ENST00000547281 IPO8O15397 1037 aaKnown RBP20.16■□□□□ 0.82
CDK4-204ENST00000547281 TNNI2P48788 182 aa20.16■□□□□ 0.82
CDK4-204ENST00000547281 HDLBPQ00341 1268 aaKnown RBP20.16■□□□□ 0.82
CDK4-204ENST00000547281 MAP3K11Q16584 847 aa20.16■□□□□ 0.82
CDK4-204ENST00000547281 ATG9AQ7Z3C6 839 aa20.16■□□□□ 0.82
CDK4-204ENST00000547281 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
CDK4-204ENST00000547281 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
CDK4-204ENST00000547281 FBXO3Q9UK99 471 aa20.16■□□□□ 0.82
CDK4-204ENST00000547281 KIF16BQ96L93 1317 aa20.16■□□□□ 0.82
CDK4-204ENST00000547281 AKAP11Q9UKA4 1901 aa20.15■□□□□ 0.82
CDK4-204ENST00000547281 USP2O75604 605 aaPredicted RBP20.15■□□□□ 0.82
CDK4-204ENST00000547281 CLMNQ96JQ2 1002 aa20.15■□□□□ 0.82
CDK4-204ENST00000547281 MEIS3Q99687 375 aa20.15■□□□□ 0.82
CDK4-204ENST00000547281 UNCXA6NJT0 531 aa20.14■□□□□ 0.81
CDK4-204ENST00000547281 CIAO1O76071 339 aa20.14■□□□□ 0.81
CDK4-204ENST00000547281 INHBEP58166 350 aa20.14■□□□□ 0.81
CDK4-204ENST00000547281 ATP2B3Q16720 1220 aa20.14■□□□□ 0.81
CDK4-204ENST00000547281 WDR66Q8TBY9 1149 aa20.14■□□□□ 0.81
CDK4-204ENST00000547281 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
CDK4-204ENST00000547281 MAST3O60307 1309 aa20.13■□□□□ 0.81
CDK4-204ENST00000547281 MANSC4A6NHS7 340 aaPredicted RBP20.13■□□□□ 0.81
CDK4-204ENST00000547281 GNAI3P08754 354 aa20.13■□□□□ 0.81
CDK4-204ENST00000547281 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
CDK4-204ENST00000547281 INTS3Q68E01 1043 aaKnown RBP20.13■□□□□ 0.81
CDK4-204ENST00000547281 CTU1Q7Z7A3 348 aaKnown RBP20.13■□□□□ 0.81
CDK4-204ENST00000547281 ANKRD13AQ8IZ07 590 aa20.13■□□□□ 0.81
CDK4-204ENST00000547281 MRIQ9BWK5 157 aa20.13■□□□□ 0.81
CDK4-204ENST00000547281 TMEM39BQ9GZU3 492 aa20.13■□□□□ 0.81
CDK4-204ENST00000547281 TMOD2Q9NZR1 351 aa20.13■□□□□ 0.81
CDK4-204ENST00000547281 PA2G4Q9UQ80 394 aaKnown RBP20.13■□□□□ 0.81
CDK4-204ENST00000547281 SUGT1Q9Y2Z0 365 aa20.13■□□□□ 0.81
CDK4-204ENST00000547281 ZBTB48P10074 688 aaPredicted RBP20.12■□□□□ 0.81
CDK4-204ENST00000547281 WNK4Q96J92 1243 aa20.12■□□□□ 0.81
CDK4-204ENST00000547281 ZDHHC15Q96MV8 337 aa20.12■□□□□ 0.81
CDK4-204ENST00000547281 ALDH1A1P00352 501 aa20.11■□□□□ 0.81
CDK4-204ENST00000547281 CACNB3P54284 484 aa20.11■□□□□ 0.81
CDK4-204ENST00000547281 ZNF296Q8WUU4 475 aaPredicted RBP20.11■□□□□ 0.81
CDK4-204ENST00000547281 SSC5DA1L4H1 1573 aa20.1■□□□□ 0.81
CDK4-204ENST00000547281 GPR25O00155 361 aa20.1■□□□□ 0.81
CDK4-204ENST00000547281 HHIPL2Q6UWX4 724 aa20.1■□□□□ 0.81
CDK4-204ENST00000547281 TEPSINQ96N21 525 aa20.1■□□□□ 0.81
CDK4-204ENST00000547281 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
CDK4-204ENST00000547281 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
CDK4-204ENST00000547281 SRGAP3O43295 1099 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 TRIM27P14373 513 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 OTUD7BQ6GQQ9 843 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 APOBEC3HQ6NTF7 200 aaKnown RBP20.09■□□□□ 0.81
CDK4-204ENST00000547281 ATF7IPQ6VMQ6 1270 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 IFNL1Q8IU54 200 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 CDAN1Q8IWY9 1227 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 CLUAP1Q96AJ1 413 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 ELP3Q9H9T3 547 aa20.09■□□□□ 0.81
CDK4-204ENST00000547281 MAP3K9P80192 1104 aa20.08■□□□□ 0.81
CDK4-204ENST00000547281 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
CDK4-204ENST00000547281 ECM29Q5VYK3 1845 aa20.07■□□□□ 0.8
CDK4-204ENST00000547281 FKTNO75072 461 aa20.07■□□□□ 0.8
CDK4-204ENST00000547281 LDHBP07195 334 aaKnown RBP20.07■□□□□ 0.8
CDK4-204ENST00000547281 TIMM10P62072 90 aa20.07■□□□□ 0.8
CDK4-204ENST00000547281 MLLT1Q03111 559 aaPredicted RBP20.07■□□□□ 0.8
CDK4-204ENST00000547281 OPTNQ96CV9 577 aa20.07■□□□□ 0.8
CDK4-204ENST00000547281 R3HDMLQ9H3Y0 253 aa20.07■□□□□ 0.8
CDK4-204ENST00000547281 CSADQ9Y600 493 aa20.07■□□□□ 0.8
CDK4-204ENST00000547281 GNAI2P04899 355 aa20.06■□□□□ 0.8
CDK4-204ENST00000547281 PHKA1P46020 1223 aa20.06■□□□□ 0.8
CDK4-204ENST00000547281 PKN2Q16513 984 aaKnown RBP20.06■□□□□ 0.8
CDK4-204ENST00000547281 NOM1Q5C9Z4 860 aaKnown RBP20.06■□□□□ 0.8
CDK4-204ENST00000547281 FKBP1CQ5VVH2 108 aa20.06■□□□□ 0.8
CDK4-204ENST00000547281 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
CDK4-204ENST00000547281 FAM83AQ86UY5 434 aa20.06■□□□□ 0.8
CDK4-204ENST00000547281 HOOK2Q96ED9 719 aa20.06■□□□□ 0.8
CDK4-204ENST00000547281 AKAP2Q9Y2D5 859 aa20.06■□□□□ 0.8
CDK4-204ENST00000547281 SEMA3EO15041 775 aa20.05■□□□□ 0.8
CDK4-204ENST00000547281 ADORA1P30542 326 aa20.05■□□□□ 0.8
CDK4-204ENST00000547281 GJA5P36382 358 aa20.05■□□□□ 0.8
CDK4-204ENST00000547281 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.05■□□□□ 0.8
CDK4-204ENST00000547281 CFHR5Q9BXR6 569 aa20.05■□□□□ 0.8
CDK4-204ENST00000547281 IGF2BP3O00425 579 aaKnown RBP eCLIP20.04■□□□□ 0.8
CDK4-204ENST00000547281 PRDX5P30044 214 aa20.04■□□□□ 0.8
CDK4-204ENST00000547281 RGS19P49795 217 aa20.04■□□□□ 0.8
CDK4-204ENST00000547281 TFCP2Q12800 502 aa20.04■□□□□ 0.8
CDK4-204ENST00000547281 VGLL4Q14135 290 aa20.04■□□□□ 0.8
CDK4-204ENST00000547281 DIXDC1Q155Q3 683 aa20.04■□□□□ 0.8
CDK4-204ENST00000547281 CCDC102BQ68D86 513 aa20.04■□□□□ 0.8
CDK4-204ENST00000547281 NEUROD6Q96NK8 337 aa20.04■□□□□ 0.8
CDK4-204ENST00000547281 MTX1Q13505 466 aa20.03■□□□□ 0.8
CDK4-204ENST00000547281 ZGPATQ8N5A5 531 aaKnown RBP20.03■□□□□ 0.8
CDK4-204ENST00000547281 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.03■□□□□ 0.81e-7■■■■□ 25.5
CDK4-204ENST00000547281 USP40Q9NVE5 1235 aa20.03■□□□□ 0.8
CDK4-204ENST00000547281 DAGLAQ9Y4D2 1042 aa20.03■□□□□ 0.8
CDK4-204ENST00000547281 A0A1B0GUL7 405 aa20.02■□□□□ 0.8
CDK4-204ENST00000547281 TCP10Q12799 353 aa20.02■□□□□ 0.8
CDK4-204ENST00000547281 G3BP1Q13283 466 aaKnown RBP eCLIP20.02■□□□□ 0.84e-8■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms