RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
DDX54-203ENST00000546869 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
DDX54-203ENST00000546869 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
DDX54-203ENST00000546869 CFAP100Q494V2 611 aa17.7■□□□□ 0.42
DDX54-203ENST00000546869 DCPSQ96C86 337 aaKnown RBP17.7■□□□□ 0.42
DDX54-203ENST00000546869 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
DDX54-203ENST00000546869 IGHDP01880 384 aa17.69■□□□□ 0.42
DDX54-203ENST00000546869 ATP5JP18859 108 aa17.69■□□□□ 0.42
DDX54-203ENST00000546869 PRDX5P30044 214 aa17.69■□□□□ 0.42
DDX54-203ENST00000546869 CRKP46108 304 aa17.69■□□□□ 0.42
DDX54-203ENST00000546869 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
DDX54-203ENST00000546869 TEKT1Q969V4 418 aa17.69■□□□□ 0.42
DDX54-203ENST00000546869 FAM163AQ96GL9 167 aaPredicted RBP17.69■□□□□ 0.42
DDX54-203ENST00000546869 PRMT6Q96LA8 375 aaPredicted RBP17.69■□□□□ 0.42
DDX54-203ENST00000546869 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
DDX54-203ENST00000546869 MYO1BO43795 1136 aa17.68■□□□□ 0.42
DDX54-203ENST00000546869 CYP2E1P05181 493 aaPredicted RBP17.68■□□□□ 0.42
DDX54-203ENST00000546869 ANGEL2Q5VTE6 544 aaKnown RBP17.68■□□□□ 0.42
DDX54-203ENST00000546869 PI16Q6UXB8 463 aa17.68■□□□□ 0.42
DDX54-203ENST00000546869 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
DDX54-203ENST00000546869 SLF2Q8IX21 1173 aa17.68■□□□□ 0.42
DDX54-203ENST00000546869 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.42
DDX54-203ENST00000546869 GGA3Q9NZ52 723 aa17.67■□□□□ 0.42
DDX54-203ENST00000546869 ABCF2Q9UG63 623 aa17.67■□□□□ 0.42
DDX54-203ENST00000546869 HSPA6P17066 643 aa17.66■□□□□ 0.42
DDX54-203ENST00000546869 ZAP70P43403 619 aa17.66■□□□□ 0.42
DDX54-203ENST00000546869 ANKRD45Q5TZF3 282 aa17.66■□□□□ 0.42
DDX54-203ENST00000546869 APOBEC3HQ6NTF7 200 aaKnown RBP17.66■□□□□ 0.42
DDX54-203ENST00000546869 KRT26Q7Z3Y9 468 aa17.66■□□□□ 0.42
DDX54-203ENST00000546869 SULF1Q8IWU6 871 aa17.66■□□□□ 0.42
DDX54-203ENST00000546869 SNRKQ9NRH2 765 aa17.66■□□□□ 0.42
DDX54-203ENST00000546869 ECHDC1Q9NTX5 307 aa17.66■□□□□ 0.42
DDX54-203ENST00000546869 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
DDX54-203ENST00000546869 LDHCP07864 332 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 APLP1P51693 650 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 GSTO1P78417 241 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 TTF1Q15361 905 aaPredicted RBP17.65■□□□□ 0.42
DDX54-203ENST00000546869 SPDYE2Q495Y8 402 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 APOBEC3FQ8IUX4 373 aaKnown RBP17.65■□□□□ 0.42
DDX54-203ENST00000546869 NSUN4Q96CB9 384 aaKnown RBP17.65■□□□□ 0.42
DDX54-203ENST00000546869 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 PCDHAC2Q9Y5I4 1007 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 GAKO14976 1311 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 ASTN2O75129 1339 aaPredicted RBP17.65■□□□□ 0.42
DDX54-203ENST00000546869 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
DDX54-203ENST00000546869 MYH13Q9UKX3 1938 aa17.64■□□□□ 0.42
DDX54-203ENST00000546869 MECOMQ03112 1051 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 FKBP1CQ5VVH2 108 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 DZIP1Q86YF9 867 aaKnown RBP17.64■□□□□ 0.41
DDX54-203ENST00000546869 GPATCH3Q96I76 525 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 HAUS7Q99871 368 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 GLIS2Q9BZE0 524 aaPredicted RBP17.64■□□□□ 0.41
DDX54-203ENST00000546869 DAGLAQ9Y4D2 1042 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 PPP2R3BQ9Y5P8 575 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 AKAP11Q9UKA4 1901 aa17.64■□□□□ 0.41
DDX54-203ENST00000546869 MAP4K4O95819 1239 aaPredicted RBP17.63■□□□□ 0.41
DDX54-203ENST00000546869 NUCB1Q02818 461 aa17.63■□□□□ 0.41
DDX54-203ENST00000546869 DIXDC1Q155Q3 683 aa17.63■□□□□ 0.41
DDX54-203ENST00000546869 ZNF384Q8TF68 577 aa17.63■□□□□ 0.41
DDX54-203ENST00000546869 RAI14Q9P0K7 980 aa17.63■□□□□ 0.41
DDX54-203ENST00000546869 ZNF70Q9UC06 446 aaPredicted RBP17.63■□□□□ 0.41
DDX54-203ENST00000546869 SALL3Q9BXA9 1300 aa17.63■□□□□ 0.41
DDX54-203ENST00000546869 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
DDX54-203ENST00000546869 TNFAIP1Q13829 316 aa17.62■□□□□ 0.41
DDX54-203ENST00000546869 TDRD3Q9H7E2 651 aaKnown RBP17.62■□□□□ 0.41
DDX54-203ENST00000546869 PIH1D3Q9NQM4 214 aaKnown RBP17.62■□□□□ 0.41
DDX54-203ENST00000546869 STAP2Q9UGK3 403 aa17.62■□□□□ 0.41
DDX54-203ENST00000546869 ERC2O15083 957 aa17.61■□□□□ 0.41
DDX54-203ENST00000546869 CHD1LQ86WJ1 897 aa17.61■□□□□ 0.41
DDX54-203ENST00000546869 BOLA2Q9H3K6 86 aa17.61■□□□□ 0.41
DDX54-203ENST00000546869 ANTXR1Q9H6X2 564 aa17.61■□□□□ 0.41
DDX54-203ENST00000546869 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
DDX54-203ENST00000546869 MROH7-TTC4A0A0A0MT08 1334 aa17.61■□□□□ 0.41
DDX54-203ENST00000546869 AOX1Q06278 1338 aa17.61■□□□□ 0.41
DDX54-203ENST00000546869 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 ADM5C9JUS6 153 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 TRAF5O00463 557 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 MX1P20591 662 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 MAP3K12Q12852 859 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 CST9Q5W186 159 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 FAM83AQ86UY5 434 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 DEFB129Q9H1M3 183 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 PAG1Q9NWQ8 432 aa17.6■□□□□ 0.41
DDX54-203ENST00000546869 CLRN2A0PK11 232 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 GLRX3O76003 335 aaKnown RBP17.59■□□□□ 0.41
DDX54-203ENST00000546869 TNNI2P48788 182 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 PPP4CP60510 307 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 ERICH6BQ5W0A0 696 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 NAA16Q6N069 864 aaPredicted RBP17.59■□□□□ 0.41
DDX54-203ENST00000546869 CDC42EP5Q6NZY7 148 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 CDCA5Q96FF9 252 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 IDI2Q9BXS1 227 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
DDX54-203ENST00000546869 GOLIM4O00461 696 aa17.58■□□□□ 0.4
DDX54-203ENST00000546869 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
DDX54-203ENST00000546869 IDH1O75874 414 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms