RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 NECAB3Q96P71 396 aaPredicted RBP9.8□□□□□ -0.84
NPAS3-204ENST00000546849 CARD10Q9BWT7 1032 aa9.8□□□□□ -0.84
NPAS3-204ENST00000546849 EMILIN2Q9BXX0 1053 aa9.8□□□□□ -0.84
NPAS3-204ENST00000546849 OSGEPQ9NPF4 335 aa9.8□□□□□ -0.84
NPAS3-204ENST00000546849 FSCN2O14926 492 aa9.79□□□□□ -0.84
NPAS3-204ENST00000546849 GBP2P32456 591 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-204ENST00000546849 BAG6P46379 1132 aa9.79□□□□□ -0.84
NPAS3-204ENST00000546849 AP3B2Q13367 1082 aa9.79□□□□□ -0.84
NPAS3-204ENST00000546849 ZNF423Q2M1K9 1284 aa9.79□□□□□ -0.84
NPAS3-204ENST00000546849 TTBK2Q6IQ55 1244 aa9.79□□□□□ -0.84
NPAS3-204ENST00000546849 ADAMTSL4Q6UY14 1074 aa9.79□□□□□ -0.84
NPAS3-204ENST00000546849 SOX17Q9H6I2 414 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-204ENST00000546849 SOX1O00570 391 aaPredicted RBP9.78□□□□□ -0.84
NPAS3-204ENST00000546849 GNB5O14775 395 aa9.78□□□□□ -0.84
NPAS3-204ENST00000546849 CYP11A1P05108 521 aa9.78□□□□□ -0.84
NPAS3-204ENST00000546849 NID1P14543 1247 aa9.78□□□□□ -0.84
NPAS3-204ENST00000546849 SULF2Q8IWU5 870 aa9.78□□□□□ -0.84
NPAS3-204ENST00000546849 KLHL23Q8NBE8 558 aa9.78□□□□□ -0.84
NPAS3-204ENST00000546849 IGSF5Q9NSI5 407 aa9.78□□□□□ -0.84
NPAS3-204ENST00000546849 F6X3S4 739 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 ENC1O14682 589 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 LIG3P49916 1009 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 LRRC14Q15048 493 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 PRRT3Q5FWE3 981 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 PCNX4Q63HM2 1172 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 ZNF654Q8IZM8 581 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 DTWD1Q8N5C7 304 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 CORO1BQ9BR76 489 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 KBTBD4Q9NVX7 518 aa9.77□□□□□ -0.85
NPAS3-204ENST00000546849 NOP53Q9NZM5 478 aaKnown RBP9.77□□□□□ -0.85
NPAS3-204ENST00000546849 MSTNO14793 375 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 NME2P22392 152 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 TRIM28Q13263 835 aaKnown RBP9.76□□□□□ -0.85
NPAS3-204ENST00000546849 ZNF394Q53GI3 561 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 HP1BP3Q5SSJ5 553 aaPredicted RBP9.76□□□□□ -0.85
NPAS3-204ENST00000546849 METTL16Q86W50 562 aaKnown RBP9.76□□□□□ -0.85
NPAS3-204ENST00000546849 SPOCK3Q9BQ16 436 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 TRIM56Q9BRZ2 755 aaKnown RBP9.76□□□□□ -0.85
NPAS3-204ENST00000546849 RSRP1Q9BUV0 290 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 PLVAPQ9BX97 442 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 USP26Q9BXU7 913 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 TGIF2Q9GZN2 237 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 PCDHGB7Q9Y5F8 929 aa9.76□□□□□ -0.85
NPAS3-204ENST00000546849 MINDY4BA8MYZ0 360 aa9.75□□□□□ -0.85
NPAS3-204ENST00000546849 GNL2Q13823 731 aaKnown RBP9.75□□□□□ -0.85
NPAS3-204ENST00000546849 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.75□□□□□ -0.85
NPAS3-204ENST00000546849 PAGE1O75459 146 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 PROCP04070 461 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-204ENST00000546849 NLRP12P59046 1061 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 ZC3H6P61129 1189 aaKnown RBP9.74□□□□□ -0.85
NPAS3-204ENST00000546849 POU4F3Q15319 338 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 SNAP47Q5SQN1 464 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 LLGL2Q6P1M3 1020 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 ERMP1Q7Z2K6 904 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 KCNB2Q92953 911 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 TMEM74Q96NL1 305 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 COPRSQ9NQ92 184 aa9.74□□□□□ -0.85
NPAS3-204ENST00000546849 ARNTP27540 789 aa9.73□□□□□ -0.85
NPAS3-204ENST00000546849 CD68P34810 354 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-204ENST00000546849 RPS26P62854 115 aaKnown RBP9.73□□□□□ -0.85
NPAS3-204ENST00000546849 PDE3AQ14432 1141 aa9.73□□□□□ -0.85
NPAS3-204ENST00000546849 SETDB1Q15047 1291 aa9.73□□□□□ -0.85
NPAS3-204ENST00000546849 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
NPAS3-204ENST00000546849 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
NPAS3-204ENST00000546849 DDX41Q9UJV9 622 aaKnown RBP9.73□□□□□ -0.85
NPAS3-204ENST00000546849 CYP8B1Q9UNU6 501 aa9.73□□□□□ -0.85
NPAS3-204ENST00000546849 A0A0A0MRY4 1105 aa9.72□□□□□ -0.85
NPAS3-204ENST00000546849 HGSNATQ68CP4 663 aa9.72□□□□□ -0.85
NPAS3-204ENST00000546849 KLHDC7BQ96G42 594 aa9.72□□□□□ -0.85
NPAS3-204ENST00000546849 TLR6Q9Y2C9 796 aa9.72□□□□□ -0.85
NPAS3-204ENST00000546849 INPP5FQ9Y2H2 1132 aa9.72□□□□□ -0.85
NPAS3-204ENST00000546849 KRBA1A5PL33 1030 aa9.71□□□□□ -0.86
NPAS3-204ENST00000546849 GSTP1P09211 210 aaKnown RBP9.71□□□□□ -0.86
NPAS3-204ENST00000546849 MAP1SQ66K74 1059 aaPredicted RBP9.71□□□□□ -0.86
NPAS3-204ENST00000546849 LINC00114Q6XXX2 140 aa9.71□□□□□ -0.86
NPAS3-204ENST00000546849 FMR1NBQ8N0W7 255 aaPredicted RBP9.71□□□□□ -0.86
NPAS3-204ENST00000546849 PHC3Q8NDX5 983 aa9.71□□□□□ -0.86
NPAS3-204ENST00000546849 TRIM11Q96F44 468 aa9.71□□□□□ -0.86
NPAS3-204ENST00000546849 ZC3H12CQ9C0D7 883 aaKnown RBP9.71□□□□□ -0.86
NPAS3-204ENST00000546849 CAPN10Q9HC96 672 aa9.71□□□□□ -0.86
NPAS3-204ENST00000546849 MAOBP27338 520 aa9.7□□□□□ -0.86
NPAS3-204ENST00000546849 COL8A1P27658 744 aa9.7□□□□□ -0.86
NPAS3-204ENST00000546849 COL9A3Q14050 684 aaPredicted RBP9.7□□□□□ -0.86
NPAS3-204ENST00000546849 DUOXA2Q1HG44 320 aa9.7□□□□□ -0.86
NPAS3-204ENST00000546849 AGMOQ6ZNB7 445 aa9.7□□□□□ -0.86
NPAS3-204ENST00000546849 FBXO11Q86XK2 927 aa9.7□□□□□ -0.86
NPAS3-204ENST00000546849 KIAA0825Q8IV33 1275 aa9.7□□□□□ -0.86
NPAS3-204ENST00000546849 SPON2Q9BUD6 331 aa9.7□□□□□ -0.86
NPAS3-204ENST00000546849 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
NPAS3-204ENST00000546849 ADAM23O75077 832 aa9.69□□□□□ -0.86
NPAS3-204ENST00000546849 PF4P02776 101 aa9.69□□□□□ -0.86
NPAS3-204ENST00000546849 EIF4A3P38919 411 aaKnown RBP9.69□□□□□ -0.86
NPAS3-204ENST00000546849 FAM160A1Q05DH4 1040 aa9.69□□□□□ -0.86
NPAS3-204ENST00000546849 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
NPAS3-204ENST00000546849 CAMK2GQ13555 558 aaPredicted RBP9.69□□□□□ -0.86
NPAS3-204ENST00000546849 GALNT11Q8NCW6 608 aa9.69□□□□□ -0.86
NPAS3-204ENST00000546849 ACBD3Q9H3P7 528 aa9.69□□□□□ -0.86
NPAS3-204ENST00000546849 SUPT16HQ9Y5B9 1047 aaKnown RBP9.69□□□□□ -0.86
NPAS3-204ENST00000546849 DEAF1O75398 565 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms