RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ANTXR1Q9H6X2 564 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 LZTFL1Q9NQ48 299 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 EXOC1Q9NV70 894 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 BUB1BO60566 1050 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-212ENST00000546744 NAA16Q6N069 864 aaPredicted RBP14.46□□□□□ -0.09
PTCH1-212ENST00000546744 SPAG5Q96R06 1193 aa14.46□□□□□ -0.09
PTCH1-212ENST00000546744 NLRP5P59047 1200 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 FANCCQ00597 558 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 LRCH2Q5VUJ6 765 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 MIPOL1Q8TD10 442 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 ZNF215Q9UL58 517 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 GOLGA8KD6RF30 607 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 ACTN2P35609 894 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 CEP85LQ5SZL2 805 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 DHX32Q7L7V1 743 aaKnown RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 ARHGAP24Q8N264 748 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 MEIS3Q99687 375 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 TACO1Q9BSH4 297 aaKnown RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 KRT23Q9C075 422 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 LAMC1P11047 1609 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 TTC21AQ8NDW8 1320 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 KLF18A0A0U1RQI7 1052 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 ZBTB43O43298 467 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 ATP2C2O75185 946 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 KARSQ15046 597 aaKnown RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 CCDC122Q5T0U0 273 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 KCNH5Q8NCM2 988 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 DNAI2Q9GZS0 605 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 RNF216Q9NWF9 866 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 SYNMO15061 1565 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 TRIM75PA6NK02 468 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 ZBTB7BO15156 539 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 IKQ13123 557 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 TMEM67Q5HYA8 995 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 CCDC8Q9H0W5 538 aaPredicted RBP14.45□□□□□ -0.1
PTCH1-212ENST00000546744 GUCA1BQ9UMX6 200 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 IKBKGQ9Y6K9 419 aa14.45□□□□□ -0.1
PTCH1-212ENST00000546744 F6X3S4 739 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 INTS8Q75QN2 995 aaKnown RBP14.44□□□□□ -0.1
PTCH1-212ENST00000546744 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 CREB3L3Q68CJ9 461 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 C8orf74Q6P047 294 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 MCM10Q7L590 875 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 LRP2BPQ9P2M1 347 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 NLRP12P59046 1061 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 VEZTQ9HBM0 779 aa14.44□□□□□ -0.1
PTCH1-212ENST00000546744 PREX1Q8TCU6 1659 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 VAMP4O75379 141 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 SLMAPQ14BN4 828 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 CTNNBL1Q8WYA6 563 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-212ENST00000546744 SPATS2LQ9NUQ6 558 aaKnown RBP14.43□□□□□ -0.1
PTCH1-212ENST00000546744 VGLL3A8MV65 326 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 PCK1P35558 622 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 VWA3BQ502W6 1294 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 KRI1Q8N9T8 703 aaKnown RBP14.43□□□□□ -0.1
PTCH1-212ENST00000546744 STMN2Q93045 179 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 HDAC9Q9UKV0 1011 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 NLRP1Q9C000 1473 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 CCDC174Q6PII3 467 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 Q6ZUG5 572 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 GAS2L3Q86XJ1 694 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 RNF168Q8IYW5 571 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-212ENST00000546744 IQUBQ8NA54 791 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 LEO1Q8WVC0 666 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-212ENST00000546744 HOMER2Q9NSB8 354 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 CCDC151A5D8V7 595 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 RASSF2P50749 326 aa14.43□□□□□ -0.1
PTCH1-212ENST00000546744 RRP15Q9Y3B9 282 aaKnown RBP14.43□□□□□ -0.1
PTCH1-212ENST00000546744 FAM177BA6PVY3 158 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 GNAQP50148 359 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 ESCO1Q5FWF5 840 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 ARMC9Q7Z3E5 817 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 NME9Q86XW9 330 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 TBC1D5Q92609 795 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 NKIRAS1Q9NYS0 192 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 A0A1W2PP64 1363 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 CALML3P27482 149 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 ZBTB16Q05516 673 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 PRPF4BQ13523 1007 aaKnown RBP14.42□□□□□ -0.1
PTCH1-212ENST00000546744 PPP2R5EQ16537 467 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 METTL24Q5JXM2 366 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 DHX37Q8IY37 1157 aaKnown RBP14.42□□□□□ -0.1
PTCH1-212ENST00000546744 IGSF22Q8N9C0 903 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 PLCB1Q9NQ66 1216 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 JRKLQ9Y4A0 524 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 METP08581 1390 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 MROH2AA6NES4 1674 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 ACTN4O43707 911 aaKnown RBP14.42□□□□□ -0.1
PTCH1-212ENST00000546744 CABP4P57796 275 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 NEDD9Q14511 834 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-212ENST00000546744 IQCGQ9H095 443 aaKnown RBP14.42□□□□□ -0.1
PTCH1-212ENST00000546744 MYO1AQ9UBC5 1043 aa14.42□□□□□ -0.1
PTCH1-212ENST00000546744 NEXMIFQ5QGS0 1516 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 PTPDC1A2A3K4 754 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 RILPL1Q5EBL4 403 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 TAOK1Q7L7X3 1001 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 DDX54Q8TDD1 881 aaKnown RBP14.41□□□□□ -0.1
PTCH1-212ENST00000546744 IDEP14735 1019 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms