RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 SALL1Q9NSC2 1324 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 MYO1BO43795 1136 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 SURF6O75683 361 aaKnown RBP14.66□□□□□ -0.06
YBX3-217ENST00000546164 VEGFBP49765 207 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 GRIK5Q16478 980 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 C20orf194Q5TEA3 1177 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 ZNF408Q9H9D4 720 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 GBA2Q9HCG7 927 aaPredicted RBP14.66□□□□□ -0.06
YBX3-217ENST00000546164 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 MAST3O60307 1309 aa14.66□□□□□ -0.06
YBX3-217ENST00000546164 CRKP46108 304 aa14.65□□□□□ -0.06
YBX3-217ENST00000546164 FKBP1BP68106 108 aa14.65□□□□□ -0.06
YBX3-217ENST00000546164 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
YBX3-217ENST00000546164 ECE1P42892 770 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 OS9Q13438 667 aaPredicted RBP14.64□□□□□ -0.07
YBX3-217ENST00000546164 RASGRF1Q13972 1273 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 TNNI3KQ59H18 835 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 C2orf69Q8N8R5 385 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 NEUROD6Q96NK8 337 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 PPP2R3BQ9Y5P8 575 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 FPGT-TNNI3KV9GXZ4 949 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 AOX1Q06278 1338 aa14.64□□□□□ -0.07
YBX3-217ENST00000546164 HMMRO75330 724 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 RBM5P52756 815 aaKnown RBP eCLIP14.63□□□□□ -0.07
YBX3-217ENST00000546164 HUNKP57058 714 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 HSP90AB4PQ58FF6 505 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 HHIPL2Q6UWX4 724 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 SIRT2Q8IXJ6 389 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 ZGPATQ8N5A5 531 aaKnown RBP14.63□□□□□ -0.07
YBX3-217ENST00000546164 TEKT1Q969V4 418 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 CAPNS2Q96L46 248 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 ZDHHC15Q96MV8 337 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 DEFB129Q9H1M3 183 aa14.63□□□□□ -0.07
YBX3-217ENST00000546164 WDR33Q9C0J8 1336 aaKnown RBP14.63□□□□□ -0.07
YBX3-217ENST00000546164 ARID4AP29374 1257 aaPredicted RBP14.62□□□□□ -0.07
YBX3-217ENST00000546164 ERC1Q8IUD2 1116 aa14.62□□□□□ -0.07
YBX3-217ENST00000546164 ZNF70Q9UC06 446 aaPredicted RBP14.62□□□□□ -0.07
YBX3-217ENST00000546164 SCAF8Q9UPN6 1271 aaKnown RBP14.62□□□□□ -0.07
YBX3-217ENST00000546164 CLRN2A0PK11 232 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 PRDX5P30044 214 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 NF2P35240 595 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 RRP1P56182 461 aaKnown RBP14.61□□□□□ -0.07
YBX3-217ENST00000546164 TNFAIP1Q13829 316 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 GORABQ5T7V8 394 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 PRAMEF18Q5VWM3 479 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 CYP4F22Q6NT55 531 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 APOBEC3HQ6NTF7 200 aaKnown RBP14.61□□□□□ -0.07
YBX3-217ENST00000546164 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
YBX3-217ENST00000546164 ECM29Q5VYK3 1845 aa14.61□□□□□ -0.07
YBX3-217ENST00000546164 MYH13Q9UKX3 1938 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 PAPPA2Q9BXP8 1791 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 THSD7BQ9C0I4 1608 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 LDHBP07195 334 aaKnown RBP14.6□□□□□ -0.07
YBX3-217ENST00000546164 FKBP1CQ5VVH2 108 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 DBNDD2Q9BQY9 259 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 TDRD3Q9H7E2 651 aaKnown RBP14.6□□□□□ -0.07
YBX3-217ENST00000546164 VEZTQ9HBM0 779 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 HMG20BQ9P0W2 317 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 EXOC6BQ9Y2D4 811 aa14.6□□□□□ -0.07
YBX3-217ENST00000546164 MAP2K2P36507 400 aa14.59□□□□□ -0.07
YBX3-217ENST00000546164 RASA3Q14644 834 aa14.59□□□□□ -0.07
YBX3-217ENST00000546164 CCDC158Q5M9N0 1113 aa14.59□□□□□ -0.07
YBX3-217ENST00000546164 SPTY2D1Q68D10 685 aaPredicted RBP14.59□□□□□ -0.07
YBX3-217ENST00000546164 RGMBQ6NW40 437 aa14.59□□□□□ -0.07
YBX3-217ENST00000546164 PAXIP1Q6ZW49 1069 aaPredicted RBP14.59□□□□□ -0.07
YBX3-217ENST00000546164 SPATA5Q8NB90 893 aa14.59□□□□□ -0.07
YBX3-217ENST00000546164 EAF2Q96CJ1 260 aaPredicted RBP14.59□□□□□ -0.07
YBX3-217ENST00000546164 DBNLQ9UJU6 430 aaKnown RBP14.59□□□□□ -0.07
YBX3-217ENST00000546164 DAGLAQ9Y4D2 1042 aa14.59□□□□□ -0.07
YBX3-217ENST00000546164 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.08
YBX3-217ENST00000546164 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.08
YBX3-217ENST00000546164 MCAMP43121 646 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 NOGQ13253 232 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 DIXDC1Q155Q3 683 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 SUPT20HL1Q3ZLR7 823 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 RHPN1Q8TCX5 695 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 CCDC102AQ96A19 550 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 FAM163AQ96GL9 167 aaPredicted RBP14.58□□□□□ -0.08
YBX3-217ENST00000546164 WBP1LQ9NX94 342 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 GAKO14976 1311 aa14.58□□□□□ -0.08
YBX3-217ENST00000546164 SSC5DA1L4H1 1573 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 FAM155AB1AL88 458 aaPredicted RBP14.57□□□□□ -0.08
YBX3-217ENST00000546164 IGSF3O75054 1194 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 RAB11FIP3O75154 756 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 TNNI2P48788 182 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 MAP2K1Q02750 393 aaPredicted RBP14.57□□□□□ -0.08
YBX3-217ENST00000546164 MAP3K11Q16584 847 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 TTC39AQ5SRH9 613 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
YBX3-217ENST00000546164 PI16Q6UXB8 463 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 FAM83AQ86UY5 434 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 TEPSINQ96N21 525 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 TLR7Q9NYK1 1049 aaKnown RBP14.57□□□□□ -0.08
YBX3-217ENST00000546164 TMOD2Q9NZR1 351 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 ABCF2Q9UG63 623 aa14.57□□□□□ -0.08
YBX3-217ENST00000546164 UNCXA6NJT0 531 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms