RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 NACAP1Q9BZK3 213 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 CLSTN2Q9H4D0 955 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 BCAMP50895 628 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 MAP3K12Q12852 859 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 STX1AQ16623 288 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 ZBTB1Q9Y2K1 713 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 TMEM94Q12767 1356 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 F8W031 263 aaPredicted RBP11.3□□□□□ -0.6
TRAF1-203ENST00000546084 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
TRAF1-203ENST00000546084 MFSD6Q6ZSS7 791 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 PAXBP1Q9Y5B6 917 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 MAST3O60307 1309 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 CYP2D7A0A087X1C5 515 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 ANKRD26Q9UPS8 1709 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 TMEM131LA2VDJ0 1609 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 HMGB1P09429 215 aaKnown RBP11.3□□□□□ -0.6
TRAF1-203ENST00000546084 HOXB7P09629 217 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 USP5P45974 858 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 NDUFA8P51970 172 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 GRAMD1CQ8IYS0 662 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 DHX58Q96C10 678 aa11.3□□□□□ -0.6
TRAF1-203ENST00000546084 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAF1-203ENST00000546084 PDIA3P30101 505 aaKnown RBP11.29□□□□□ -0.6
TRAF1-203ENST00000546084 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
TRAF1-203ENST00000546084 SYT10Q6XYQ8 523 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 HINFPQ9BQA5 517 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 OGFRQ9NZT2 677 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 GYG1P46976 350 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 PNOCQ13519 176 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 CCDC144BQ3MJ40 725 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 LONRF3Q496Y0 759 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 UTP14CQ5TAP6 766 aaKnown RBP11.29□□□□□ -0.6
TRAF1-203ENST00000546084 ZHX3Q9H4I2 956 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 STX8Q9UNK0 236 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
TRAF1-203ENST00000546084 FEZ1Q99689 392 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 HAUS7Q99871 368 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 ANKIB1Q9P2G1 1089 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 PCDHA7Q9UN72 937 aa11.29□□□□□ -0.6
TRAF1-203ENST00000546084 UBASH3AP57075 661 aa11.28□□□□□ -0.6
TRAF1-203ENST00000546084 PDIA6Q15084 440 aa11.28□□□□□ -0.6
TRAF1-203ENST00000546084 TEX35Q5T0J7 233 aa11.28□□□□□ -0.6
TRAF1-203ENST00000546084 KIF18AQ8NI77 898 aa11.28□□□□□ -0.6
TRAF1-203ENST00000546084 NOC3LQ8WTT2 800 aaKnown RBP11.28□□□□□ -0.6
TRAF1-203ENST00000546084 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
TRAF1-203ENST00000546084 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
TRAF1-203ENST00000546084 ZNF215Q9UL58 517 aaPredicted RBP11.28□□□□□ -0.6
TRAF1-203ENST00000546084 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
TRAF1-203ENST00000546084 NSUN7Q8NE18 718 aaKnown RBP11.28□□□□□ -0.6
TRAF1-203ENST00000546084 KIF20AO95235 890 aa11.27□□□□□ -0.6
TRAF1-203ENST00000546084 TOP1P11387 765 aaKnown RBP11.27□□□□□ -0.6
TRAF1-203ENST00000546084 CASP1P29466 404 aa11.27□□□□□ -0.6
TRAF1-203ENST00000546084 CDC25AP30304 524 aa11.27□□□□□ -0.6
TRAF1-203ENST00000546084 SLC5A1P13866 664 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 WTAPQ15007 396 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
TRAF1-203ENST00000546084 USP27XA6NNY8 438 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 BTBD18B2RXH4 712 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 ZNF202O95125 648 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 ZNF174Q15697 407 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 ELF2Q15723 593 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 FKBP15Q5T1M5 1219 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 JMYQ8N9B5 988 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 SLAIN2Q9P270 581 aa11.27□□□□□ -0.61
TRAF1-203ENST00000546084 NAP1L1P55209 391 aaKnown RBP11.26□□□□□ -0.61
TRAF1-203ENST00000546084 LRRC8AQ8IWT6 810 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 KRT40Q6A162 431 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 TDRD7Q8NHU6 1098 aaKnown RBP11.26□□□□□ -0.61
TRAF1-203ENST00000546084 XPO4Q9C0E2 1151 aaKnown RBP11.26□□□□□ -0.61
TRAF1-203ENST00000546084 LZTFL1Q9NQ48 299 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 VPS54Q9P1Q0 977 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 ELP1O95163 1332 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 KIF13AQ9H1H9 1805 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
TRAF1-203ENST00000546084 POLR2DO15514 142 aaKnown RBP11.26□□□□□ -0.61
TRAF1-203ENST00000546084 ATP1A3P13637 1013 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 TCIRG1Q13488 830 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 SNW1Q13573 536 aaKnown RBP11.26□□□□□ -0.61
TRAF1-203ENST00000546084 CCDC191Q8NCU4 936 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 PIGBQ92521 554 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 GOLPH3LQ9H4A5 285 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
TRAF1-203ENST00000546084 FAM160A1Q05DH4 1040 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
TRAF1-203ENST00000546084 ANKRD7Q92527 254 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 IKQ13123 557 aaPredicted RBP11.25□□□□□ -0.61
TRAF1-203ENST00000546084 NR5A1Q13285 461 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 RTN1Q16799 776 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 SMYD4Q8IYR2 804 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms