RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
PRPF40A-212ENST00000545856 TBC1D9Q6ZT07 1266 aa19.31■□□□□ 0.68
PRPF40A-212ENST00000545856 FAM163AQ96GL9 167 aaPredicted RBP19.31■□□□□ 0.68
PRPF40A-212ENST00000545856 RAI14Q9P0K7 980 aa19.31■□□□□ 0.68
PRPF40A-212ENST00000545856 YDJCA8MPS7 323 aa19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 PDE6AP16499 860 aa19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 RASSF7Q02833 373 aa19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 C8orf34Q49A92 452 aa19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 ZMYM1Q5SVZ6 1142 aa19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 CIAPIN1Q6FI81 312 aa19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 DZIP1Q86YF9 867 aaKnown RBP19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 NSUN4Q96CB9 384 aaKnown RBP19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
PRPF40A-212ENST00000545856 REC8O95072 547 aa19.29■□□□□ 0.68
PRPF40A-212ENST00000545856 NAA16Q6N069 864 aaPredicted RBP19.29■□□□□ 0.68
PRPF40A-212ENST00000545856 RSBN1LQ6PCB5 846 aaPredicted RBP19.29■□□□□ 0.68
PRPF40A-212ENST00000545856 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
PRPF40A-212ENST00000545856 RPAP1Q9BWH6 1393 aaPredicted RBP19.29■□□□□ 0.68
PRPF40A-212ENST00000545856 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
PRPF40A-212ENST00000545856 ESYT1Q9BSJ8 1104 aa19.28■□□□□ 0.68
PRPF40A-212ENST00000545856 TCRBV5S4A2TA0A5A2 114 aa19.27■□□□□ 0.68
PRPF40A-212ENST00000545856 SGSM2O43147 1006 aa19.27■□□□□ 0.68
PRPF40A-212ENST00000545856 PRDX5P30044 214 aa19.27■□□□□ 0.68
PRPF40A-212ENST00000545856 HHIPL2Q6UWX4 724 aa19.27■□□□□ 0.68
PRPF40A-212ENST00000545856 MAGEB6Q8N7X4 407 aa19.27■□□□□ 0.68
PRPF40A-212ENST00000545856 BACH2Q9BYV9 841 aa19.27■□□□□ 0.68
PRPF40A-212ENST00000545856 HDAC9Q9UKV0 1011 aa19.27■□□□□ 0.68
PRPF40A-212ENST00000545856 ECM29Q5VYK3 1845 aa19.27■□□□□ 0.67
PRPF40A-212ENST00000545856 GAKO14976 1311 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 ZNF532Q9HCE3 1301 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 FOCADQ5VW36 1801 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 PLCG2P16885 1265 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 GNAT2P19087 354 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 MECOMQ03112 1051 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 CXCL9Q07325 125 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 DPF2Q92785 391 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 SERPINA10Q9UK55 444 aa19.26■□□□□ 0.67
PRPF40A-212ENST00000545856 BAG3O95817 575 aa19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 NMIQ13287 307 aaPredicted RBP19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 CWC27Q6UX04 472 aaKnown RBP19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 GPC2Q8N158 579 aa19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 GMLQ99445 158 aa19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 NOL10Q9BSC4 688 aaKnown RBP19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 UPF2Q9HAU5 1272 aaKnown RBP19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 MROH7-TTC4A0A0A0MT08 1334 aa19.25■□□□□ 0.67
PRPF40A-212ENST00000545856 PSMD14O00487 310 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 PRELPP51888 382 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 PPP4CP60510 307 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 OGFOD1Q8N543 542 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 CERS5Q8N5B7 392 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 FBXW7Q969H0 707 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 RNF181Q9P0P0 153 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 TTF2Q9UNY4 1162 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 CCDC171Q6TFL3 1326 aa19.24■□□□□ 0.67
PRPF40A-212ENST00000545856 A0A0D9SFI3 127 aa19.23■□□□□ 0.67
PRPF40A-212ENST00000545856 CYP7A1P22680 504 aa19.23■□□□□ 0.67
PRPF40A-212ENST00000545856 KIAA1211Q6ZU35 1233 aa19.23■□□□□ 0.67
PRPF40A-212ENST00000545856 TEKT1Q969V4 418 aa19.23■□□□□ 0.67
PRPF40A-212ENST00000545856 AIDAQ96BJ3 306 aa19.23■□□□□ 0.67
PRPF40A-212ENST00000545856 ZMYM6O95789 1325 aa19.23■□□□□ 0.67
PRPF40A-212ENST00000545856 CDK5RAP2Q96SN8 1893 aa19.23■□□□□ 0.67
PRPF40A-212ENST00000545856 RAD17O75943 681 aa19.22■□□□□ 0.67
PRPF40A-212ENST00000545856 MTMR14Q8NCE2 650 aa19.22■□□□□ 0.67
PRPF40A-212ENST00000545856 ZDHHC15Q96MV8 337 aa19.22■□□□□ 0.67
PRPF40A-212ENST00000545856 SCN4AP35499 1836 aa19.22■□□□□ 0.67
PRPF40A-212ENST00000545856 GPR75-ASB3A0A0A6YYF3 556 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 C9orf131Q5VYM1 1079 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 GIMAP6Q6P9H5 292 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 FAM227BQ96M60 508 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 DSCC1Q9BVC3 393 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 JAG2Q9Y219 1238 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 LAMA4Q16363 1823 aa19.21■□□□□ 0.67
PRPF40A-212ENST00000545856 MAGEB6P1A0A0J9YX57 407 aa19.2■□□□□ 0.66
PRPF40A-212ENST00000545856 GPAA1O43292 621 aa19.2■□□□□ 0.66
PRPF40A-212ENST00000545856 USP17L8P0C7I0 530 aa19.2■□□□□ 0.66
PRPF40A-212ENST00000545856 ZNF384Q8TF68 577 aa19.2■□□□□ 0.66
PRPF40A-212ENST00000545856 KCNQ5Q9NR82 932 aa19.2■□□□□ 0.66
PRPF40A-212ENST00000545856 ZNF280AP59817 542 aaPredicted RBP19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 DPY19L2Q6NUT2 758 aa19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 IL27Q8NEV9 243 aa19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 RIOK1Q9BRS2 568 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 PUS7LQ9H0K6 701 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 NAV1Q8NEY1 1877 aa19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 KIAA0825Q8IV33 1275 aa19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 STRBPQ96SI9 672 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 CRNKL1Q9BZJ0 848 aaKnown RBP19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 NACAP1Q9BZK3 213 aa19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 TAOK2Q9UL54 1235 aa19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 DAGLAQ9Y4D2 1042 aa19.19■□□□□ 0.66
PRPF40A-212ENST00000545856 MBD4O95243 580 aa19.18■□□□□ 0.66
PRPF40A-212ENST00000545856 CRKP46108 304 aa19.18■□□□□ 0.66
PRPF40A-212ENST00000545856 ALX1Q15699 326 aa19.18■□□□□ 0.66
PRPF40A-212ENST00000545856 DDRGK1Q96HY6 314 aa19.18■□□□□ 0.66
PRPF40A-212ENST00000545856 ANO2Q9NQ90 1003 aa19.18■□□□□ 0.66
PRPF40A-212ENST00000545856 ATP8A2Q9NTI2 1148 aa19.18■□□□□ 0.66
PRPF40A-212ENST00000545856 WDR90Q96KV7 1748 aa19.17■□□□□ 0.66
PRPF40A-212ENST00000545856 LAMB1P07942 1786 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms