RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 PDE6AP16499 860 aa18.21■□□□□ 0.5
SCAP-215ENST00000545718 MARCKSP29966 332 aaPredicted RBP18.21■□□□□ 0.5
SCAP-215ENST00000545718 METAP2P50579 478 aaKnown RBP eCLIP18.21■□□□□ 0.51e-6■■■■□ 20.8
SCAP-215ENST00000545718 NDUFA8P51970 172 aa18.21■□□□□ 0.5
SCAP-215ENST00000545718 RRP12Q5JTH9 1297 aaKnown RBP18.21■□□□□ 0.5
SCAP-215ENST00000545718 CYB5R4Q7L1T6 521 aa18.21■□□□□ 0.5
SCAP-215ENST00000545718 KLHL34Q8N239 644 aa18.21■□□□□ 0.5
SCAP-215ENST00000545718 SENP2Q9HC62 589 aa18.21■□□□□ 0.5
SCAP-215ENST00000545718 CHAF1AQ13111 956 aaPredicted RBP18.2■□□□□ 0.5
SCAP-215ENST00000545718 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
SCAP-215ENST00000545718 FILIP1Q7Z7B0 1213 aa18.2■□□□□ 0.5
SCAP-215ENST00000545718 PDCL3Q9H2J4 239 aa18.2■□□□□ 0.5
SCAP-215ENST00000545718 UBN2Q6ZU65 1347 aa18.2■□□□□ 0.5
SCAP-215ENST00000545718 CDHR2Q9BYE9 1310 aa18.2■□□□□ 0.5
SCAP-215ENST00000545718 TICAM2Q86XR7 235 aa18.2■□□□□ 0.5
SCAP-215ENST00000545718 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
SCAP-215ENST00000545718 ANGEL1Q9UNK9 670 aaKnown RBP18.2■□□□□ 0.5
SCAP-215ENST00000545718 KIF28PB7ZC32 967 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 ISM2Q6H9L7 571 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 AOPEPQ8N6M6 819 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 MYRIPQ8NFW9 859 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 C16orf45Q96MC5 204 aaPredicted RBP18.19■□□□□ 0.5
SCAP-215ENST00000545718 BCL11BQ9C0K0 894 aaPredicted RBP18.19■□□□□ 0.5
SCAP-215ENST00000545718 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 SPTLC3Q9NUV7 552 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 IQSEC3Q9UPP2 1182 aaPredicted RBP18.19■□□□□ 0.5
SCAP-215ENST00000545718 SPTLC2O15270 562 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 GLIPR1L2Q4G1C9 344 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 MYSM1Q5VVJ2 828 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 PLA2G4DQ86XP0 818 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 LINC00301Q8NCQ3 95 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 ALG1Q9BT22 464 aa18.19■□□□□ 0.5
SCAP-215ENST00000545718 CTDSPL2Q05D32 466 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 CCDC82Q8N4S0 544 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 ENGASEQ8NFI3 743 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 ANO10Q9NW15 660 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 RTEL1Q9NZ71 1219 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 IQCB1Q15051 598 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 PUM3Q15397 648 aaKnown RBP18.18■□□□□ 0.5
SCAP-215ENST00000545718 CCDC144BQ3MJ40 725 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 CEP57L1Q8IYX8 460 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 NAPBQ9H115 298 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 XIRP1Q702N8 1843 aaKnown RBP18.18■□□□□ 0.5
SCAP-215ENST00000545718 MBD4O95243 580 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 EVCP57679 992 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 ARID5BQ14865 1188 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 ADALQ6DHV7 355 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 VGLL2Q8N8G2 317 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 ARMT1Q9H993 441 aa18.18■□□□□ 0.5
SCAP-215ENST00000545718 TMEM67Q5HYA8 995 aa18.17■□□□□ 0.5
SCAP-215ENST00000545718 PRIMPOLQ96LW4 560 aa18.17■□□□□ 0.5
SCAP-215ENST00000545718 TOGARAM1Q9Y4F4 1720 aa18.17■□□□□ 0.5
SCAP-215ENST00000545718 CPLX2Q6PUV4 134 aaKnown RBP18.17■□□□□ 0.5
SCAP-215ENST00000545718 CACTINQ8WUQ7 758 aaKnown RBP18.17■□□□□ 0.5
SCAP-215ENST00000545718 LPIN2Q92539 896 aa18.17■□□□□ 0.5
SCAP-215ENST00000545718 ZKSCAN3Q9BRR0 538 aa18.17■□□□□ 0.5
SCAP-215ENST00000545718 SUSD4Q5VX71 490 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 FMR1NBQ8N0W7 255 aaPredicted RBP18.16■□□□□ 0.5
SCAP-215ENST00000545718 SPATA5Q8NB90 893 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 KCNG4Q8TDN1 519 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 NEDD4P46934 1319 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 UBE2Q2LH0YL09 131 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 SLC5A1P13866 664 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 RASGRF1Q13972 1273 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 UBE3CQ15386 1083 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 MIGA1Q8NAN2 632 aa18.16■□□□□ 0.5
SCAP-215ENST00000545718 ZBTB43O43298 467 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 CAVIN2O95810 425 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 CDC27P30260 824 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 KIF23Q02241 960 aaPredicted RBP18.15■□□□□ 0.5
SCAP-215ENST00000545718 MAP3K12Q12852 859 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 APOA5Q6Q788 366 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 GOLGA8AA7E2F4 631 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 IFIT3O14879 490 aaKnown RBP18.15■□□□□ 0.5
SCAP-215ENST00000545718 PRKAB2O43741 272 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 ATP6V1AP38606 617 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 ANO1Q5XXA6 986 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
SCAP-215ENST00000545718 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
SCAP-215ENST00000545718 TDO2P48775 406 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 BCAMP50895 628 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 ZNF592Q92610 1267 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 BCL9O00512 1426 aa18.15■□□□□ 0.5
SCAP-215ENST00000545718 SH2B2O14492 632 aaPredicted RBP18.14■□□□□ 0.49
SCAP-215ENST00000545718 PAPPAQ13219 1627 aa18.14■□□□□ 0.49
SCAP-215ENST00000545718 DPCR1Q3MIW9 517 aa18.14■□□□□ 0.49
SCAP-215ENST00000545718 KRT40Q6A162 431 aa18.14■□□□□ 0.49
SCAP-215ENST00000545718 VPS37DQ86XT2 251 aa18.14■□□□□ 0.49
SCAP-215ENST00000545718 FBXL16Q8N461 479 aa18.14■□□□□ 0.49
SCAP-215ENST00000545718 NAT10Q9H0A0 1025 aaKnown RBP18.14■□□□□ 0.49
SCAP-215ENST00000545718 ZMYM6O95789 1325 aa18.14■□□□□ 0.49
SCAP-215ENST00000545718 SLC3A2P08195 630 aaKnown RBP18.14■□□□□ 0.49
SCAP-215ENST00000545718 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
SCAP-215ENST00000545718 TRIM29Q14134 588 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms