RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 TDRD3Q9H7E2 651 aaKnown RBP24.77■■□□□ 1.56
CHD4-213ENST00000545584 MKRN3Q13064 507 aaKnown RBP24.76■■□□□ 1.55
CHD4-213ENST00000545584 MAP3K11Q16584 847 aa24.76■■□□□ 1.55
CHD4-213ENST00000545584 SUGT1Q9Y2Z0 365 aa24.76■■□□□ 1.55
CHD4-213ENST00000545584 AOX1Q06278 1338 aa24.76■■□□□ 1.55
CHD4-213ENST00000545584 IL15P40933 162 aaPredicted RBP24.75■■□□□ 1.55
CHD4-213ENST00000545584 TNNI2P48788 182 aa24.75■■□□□ 1.55
CHD4-213ENST00000545584 HNRNPUQ00839 825 aaKnown RBP eCLIP24.75■■□□□ 1.55
CHD4-213ENST00000545584 SREBF2Q12772 1141 aa24.75■■□□□ 1.55
CHD4-213ENST00000545584 DGKZQ13574 1117 aa24.75■■□□□ 1.55
CHD4-213ENST00000545584 NBPF12Q5TAG4 269 aaPredicted RBP24.75■■□□□ 1.55
CHD4-213ENST00000545584 TEKT1Q969V4 418 aa24.75■■□□□ 1.55
CHD4-213ENST00000545584 SLC10A4Q96EP9 437 aa24.75■■□□□ 1.55
CHD4-213ENST00000545584 FZD1Q9UP38 647 aa24.75■■□□□ 1.55
CHD4-213ENST00000545584 MAST3O60307 1309 aa24.75■■□□□ 1.55
CHD4-213ENST00000545584 UNCXA6NJT0 531 aa24.74■■□□□ 1.55
CHD4-213ENST00000545584 IREB2P48200 963 aaKnown RBP24.74■■□□□ 1.55
CHD4-213ENST00000545584 GRIK5Q16478 980 aa24.74■■□□□ 1.55
CHD4-213ENST00000545584 ATP2B3Q16720 1220 aa24.74■■□□□ 1.55
CHD4-213ENST00000545584 FRAT1Q92837 279 aaPredicted RBP24.74■■□□□ 1.55
CHD4-213ENST00000545584 MCOLN1Q9GZU1 580 aa24.74■■□□□ 1.55
CHD4-213ENST00000545584 GNL3LQ9NVN8 582 aaKnown RBP24.74■■□□□ 1.55
CHD4-213ENST00000545584 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.74■■□□□ 1.55
CHD4-213ENST00000545584 TM4SF4P48230 202 aa24.73■■□□□ 1.55
CHD4-213ENST00000545584 SPRYD7Q5W111 196 aa24.73■■□□□ 1.55
CHD4-213ENST00000545584 ATF7IPQ6VMQ6 1270 aa24.73■■□□□ 1.55
CHD4-213ENST00000545584 WDR66Q8TBY9 1149 aa24.73■■□□□ 1.55
CHD4-213ENST00000545584 MRIQ9BWK5 157 aa24.73■■□□□ 1.55
CHD4-213ENST00000545584 COPRSQ9NQ92 184 aa24.73■■□□□ 1.55
CHD4-213ENST00000545584 TCP10L2B9ZVM9 353 aa24.72■■□□□ 1.55
CHD4-213ENST00000545584 BCAR3O75815 825 aa24.72■■□□□ 1.55
CHD4-213ENST00000545584 TMOD2Q9NZR1 351 aa24.72■■□□□ 1.55
CHD4-213ENST00000545584 PA2G4Q9UQ80 394 aaKnown RBP24.72■■□□□ 1.55
CHD4-213ENST00000545584 SSC5DA1L4H1 1573 aa24.71■■□□□ 1.55
CHD4-213ENST00000545584 CCDC85CA6NKD9 419 aa24.71■■□□□ 1.55
CHD4-213ENST00000545584 TRIM27P14373 513 aa24.71■■□□□ 1.55
CHD4-213ENST00000545584 SRGAP3O43295 1099 aa24.7■■□□□ 1.54
CHD4-213ENST00000545584 ZDHHC15Q96MV8 337 aa24.7■■□□□ 1.54
CHD4-213ENST00000545584 MANSC4A6NHS7 340 aaPredicted RBP24.69■■□□□ 1.54
CHD4-213ENST00000545584 USP2O75604 605 aaPredicted RBP24.69■■□□□ 1.54
CHD4-213ENST00000545584 ZBTB48P10074 688 aaPredicted RBP24.69■■□□□ 1.54
CHD4-213ENST00000545584 ANKRD13AQ8IZ07 590 aa24.69■■□□□ 1.54
CHD4-213ENST00000545584 INHBEP58166 350 aa24.68■■□□□ 1.54
CHD4-213ENST00000545584 HHIPL2Q6UWX4 724 aa24.68■■□□□ 1.54
CHD4-213ENST00000545584 CLUAP1Q96AJ1 413 aa24.68■■□□□ 1.54
CHD4-213ENST00000545584 WNK4Q96J92 1243 aa24.68■■□□□ 1.54
CHD4-213ENST00000545584 CLMNQ96JQ2 1002 aa24.68■■□□□ 1.54
CHD4-213ENST00000545584 MYH13Q9UKX3 1938 aa24.68■■□□□ 1.54
CHD4-213ENST00000545584 TBC1D8O95759 1140 aa24.67■■□□□ 1.54
CHD4-213ENST00000545584 ALDH1A1P00352 501 aa24.67■■□□□ 1.54
CHD4-213ENST00000545584 GNAI2P04899 355 aa24.67■■□□□ 1.54
CHD4-213ENST00000545584 MTX1Q13505 466 aa24.67■■□□□ 1.54
CHD4-213ENST00000545584 ZKSCAN2Q63HK3 967 aa24.67■■□□□ 1.54
CHD4-213ENST00000545584 DENND2AQ9ULE3 1009 aa24.67■■□□□ 1.54
CHD4-213ENST00000545584 SEMA3EO15041 775 aa24.66■■□□□ 1.54
CHD4-213ENST00000545584 TEPSINQ96N21 525 aa24.66■■□□□ 1.54
CHD4-213ENST00000545584 TMEM39BQ9GZU3 492 aa24.66■■□□□ 1.54
CHD4-213ENST00000545584 AKAP2Q9Y2D5 859 aa24.66■■□□□ 1.54
CHD4-213ENST00000545584 APOBEC3HQ6NTF7 200 aaKnown RBP24.65■■□□□ 1.54
CHD4-213ENST00000545584 TNNQ9UQP3 1299 aa24.65■■□□□ 1.54
CHD4-213ENST00000545584 PHKA1P46020 1223 aa24.64■■□□□ 1.54
CHD4-213ENST00000545584 CACNB3P54284 484 aa24.64■■□□□ 1.54
CHD4-213ENST00000545584 FKBP1CQ5VVH2 108 aa24.64■■□□□ 1.54
CHD4-213ENST00000545584 CTU1Q7Z7A3 348 aaKnown RBP24.64■■□□□ 1.54
CHD4-213ENST00000545584 FAM83AQ86UY5 434 aa24.64■■□□□ 1.54
CHD4-213ENST00000545584 HOOK2Q96ED9 719 aa24.64■■□□□ 1.54
CHD4-213ENST00000545584 LDHBP07195 334 aaKnown RBP24.63■■□□□ 1.53
CHD4-213ENST00000545584 ZGPATQ8N5A5 531 aaKnown RBP24.63■■□□□ 1.53
CHD4-213ENST00000545584 GPR25O00155 361 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 NOM1Q5C9Z4 860 aaKnown RBP24.62■■□□□ 1.53
CHD4-213ENST00000545584 CCDC102BQ68D86 513 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 OTUD7BQ6GQQ9 843 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 IFNL1Q8IU54 200 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 CDAN1Q8IWY9 1227 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 ZNF296Q8WUU4 475 aaPredicted RBP24.62■■□□□ 1.53
CHD4-213ENST00000545584 CFHR5Q9BXR6 569 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 ELP3Q9H9T3 547 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 CSADQ9Y600 493 aa24.62■■□□□ 1.53
CHD4-213ENST00000545584 SALL1Q9NSC2 1324 aa24.61■■□□□ 1.53
CHD4-213ENST00000545584 PRDX5P30044 214 aa24.61■■□□□ 1.53
CHD4-213ENST00000545584 ADORA1P30542 326 aa24.61■■□□□ 1.53
CHD4-213ENST00000545584 TIMM10P62072 90 aa24.61■■□□□ 1.53
CHD4-213ENST00000545584 MAP3K9P80192 1104 aa24.61■■□□□ 1.53
CHD4-213ENST00000545584 TFCP2Q12800 502 aa24.61■■□□□ 1.53
CHD4-213ENST00000545584 TMEM57Q8N5G2 664 aa24.61■■□□□ 1.53
CHD4-213ENST00000545584 A0A1B0GUL7 405 aa24.6■■□□□ 1.53
CHD4-213ENST00000545584 ZBTB22O15209 634 aa24.6■■□□□ 1.53
CHD4-213ENST00000545584 MVPQ14764 893 aaKnown RBP24.6■■□□□ 1.53
CHD4-213ENST00000545584 FTSJ3Q8IY81 847 aaKnown RBP24.6■■□□□ 1.53
CHD4-213ENST00000545584 DAGLAQ9Y4D2 1042 aa24.6■■□□□ 1.53
CHD4-213ENST00000545584 G3BP1Q13283 466 aaKnown RBP eCLIP24.59■■□□□ 1.536e-7■■□□□ 11.9
CHD4-213ENST00000545584 DIXDC1Q155Q3 683 aa24.59■■□□□ 1.53
CHD4-213ENST00000545584 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.59■■□□□ 1.53
CHD4-213ENST00000545584 OPTNQ96CV9 577 aa24.59■■□□□ 1.53
CHD4-213ENST00000545584 XAGE2Q96GT9 111 aa24.59■■□□□ 1.53
CHD4-213ENST00000545584 NEUROD6Q96NK8 337 aa24.59■■□□□ 1.53
CHD4-213ENST00000545584 FKTNO75072 461 aa24.58■■□□□ 1.53
CHD4-213ENST00000545584 GJA5P36382 358 aa24.58■■□□□ 1.53
CHD4-213ENST00000545584 PKN2Q16513 984 aaKnown RBP24.58■■□□□ 1.53
CHD4-213ENST00000545584 DCAF15Q66K64 600 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms