RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TSR2Q969E8 191 aaKnown RBP18.79■□□□□ 0.6
RTN3-214ENST00000545432 SZT2Q5T011 3432 aa18.79■□□□□ 0.6
RTN3-214ENST00000545432 SLC4A8Q2Y0W8 1093 aa18.78■□□□□ 0.6
RTN3-214ENST00000545432 UBE2Q1Q7Z7E8 422 aa18.78■□□□□ 0.6
RTN3-214ENST00000545432 FAM84BQ96KN1 310 aaPredicted RBP18.78■□□□□ 0.6
RTN3-214ENST00000545432 MRIQ9BWK5 157 aa18.78■□□□□ 0.6
RTN3-214ENST00000545432 PRO3102Q9H379 93 aa18.78■□□□□ 0.6
RTN3-214ENST00000545432 OTOFQ9HC10 1997 aa18.77■□□□□ 0.6
RTN3-214ENST00000545432 RBM5P52756 815 aaKnown RBP eCLIP18.77■□□□□ 0.6
RTN3-214ENST00000545432 HDLBPQ00341 1268 aaKnown RBP18.77■□□□□ 0.6
RTN3-214ENST00000545432 UBE4AQ14139 1066 aa18.77■□□□□ 0.6
RTN3-214ENST00000545432 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
RTN3-214ENST00000545432 BEND3Q5T5X7 828 aa18.77■□□□□ 0.6
RTN3-214ENST00000545432 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
RTN3-214ENST00000545432 TTF2Q9UNY4 1162 aaKnown RBP18.77■□□□□ 0.6
RTN3-214ENST00000545432 IL16Q14005 1332 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 BTBD19C9JJ37 291 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 CETPP11597 493 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 C17orf99Q6UX52 265 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 LDHAL6AQ6ZMR3 332 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 ERO1BQ86YB8 467 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 SHISA4Q96DD7 197 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 ARHGAP39Q9C0H5 1083 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 JAG2Q9Y219 1238 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 SNCAIPQ9Y6H5 919 aa18.76■□□□□ 0.59
RTN3-214ENST00000545432 CRKP46108 304 aa18.75■□□□□ 0.59
RTN3-214ENST00000545432 TNNI2P48788 182 aa18.75■□□□□ 0.59
RTN3-214ENST00000545432 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
RTN3-214ENST00000545432 LMBR1LQ6UX01 489 aa18.75■□□□□ 0.59
RTN3-214ENST00000545432 WWC1Q8IX03 1113 aa18.75■□□□□ 0.59
RTN3-214ENST00000545432 SH3TC2Q8TF17 1288 aa18.75■□□□□ 0.59
RTN3-214ENST00000545432 CSADQ9Y600 493 aa18.75■□□□□ 0.59
RTN3-214ENST00000545432 A0A1B0GUL6 1792 aa18.75■□□□□ 0.59
RTN3-214ENST00000545432 TCP10L2B9ZVM9 353 aa18.74■□□□□ 0.59
RTN3-214ENST00000545432 VAMP4O75379 141 aa18.74■□□□□ 0.59
RTN3-214ENST00000545432 HIBADHP31937 336 aaKnown RBP18.74■□□□□ 0.59
RTN3-214ENST00000545432 FKBP1CQ5VVH2 108 aa18.74■□□□□ 0.59
RTN3-214ENST00000545432 RANBP2P49792 3224 aaKnown RBP18.74■□□□□ 0.59
RTN3-214ENST00000545432 IRF6O14896 467 aa18.73■□□□□ 0.59
RTN3-214ENST00000545432 WDHD1O75717 1129 aaPredicted RBP18.73■□□□□ 0.59
RTN3-214ENST00000545432 CTGFP29279 349 aa18.73■□□□□ 0.59
RTN3-214ENST00000545432 PPIL2Q13356 520 aa18.73■□□□□ 0.59
RTN3-214ENST00000545432 CCDC57Q2TAC2 916 aa18.73■□□□□ 0.59
RTN3-214ENST00000545432 FBXO33Q7Z6M2 555 aa18.73■□□□□ 0.59
RTN3-214ENST00000545432 FAM83AQ86UY5 434 aa18.73■□□□□ 0.59
RTN3-214ENST00000545432 ZNF594Q96JF6 807 aaPredicted RBP18.73■□□□□ 0.59
RTN3-214ENST00000545432 GYG1P46976 350 aa18.72■□□□□ 0.59
RTN3-214ENST00000545432 SNAPC2Q13487 334 aa18.72■□□□□ 0.59
RTN3-214ENST00000545432 KIF22Q14807 665 aa18.72■□□□□ 0.59
RTN3-214ENST00000545432 GRIK5Q16478 980 aa18.72■□□□□ 0.59
RTN3-214ENST00000545432 CHRDL2Q6WN34 429 aa18.72■□□□□ 0.59
RTN3-214ENST00000545432 NKX2-3Q8TAU0 364 aa18.72■□□□□ 0.59
RTN3-214ENST00000545432 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
RTN3-214ENST00000545432 SRRDQ9UH36 339 aa18.72■□□□□ 0.59
RTN3-214ENST00000545432 GJA8P48165 433 aa18.71■□□□□ 0.59
RTN3-214ENST00000545432 MTFR1Q15390 333 aa18.71■□□□□ 0.59
RTN3-214ENST00000545432 RIPOR2Q9Y4F9 1068 aa18.71■□□□□ 0.59
RTN3-214ENST00000545432 ADGRA2Q96PE1 1338 aa18.71■□□□□ 0.59
RTN3-214ENST00000545432 CACNA1FO60840 1977 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 GRM8O00222 908 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 PLIN1O60240 522 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 GJB1P08034 283 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 PPATQ06203 517 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 ANKRD23Q86SG2 305 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 ARAP2Q8WZ64 1704 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 ZDHHC15Q96MV8 337 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
RTN3-214ENST00000545432 APOBEC3HQ6NTF7 200 aaKnown RBP18.69■□□□□ 0.58
RTN3-214ENST00000545432 TBC1D22AQ8WUA7 517 aa18.69■□□□□ 0.58
RTN3-214ENST00000545432 ZKSCAN4Q969J2 545 aaPredicted RBP18.69■□□□□ 0.58
RTN3-214ENST00000545432 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
RTN3-214ENST00000545432 TRIM47Q96LD4 638 aa18.69■□□□□ 0.58
RTN3-214ENST00000545432 ZNF112Q9UJU3 913 aa18.69■□□□□ 0.58
RTN3-214ENST00000545432 KCNH4Q9UQ05 1017 aa18.69■□□□□ 0.58
RTN3-214ENST00000545432 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
RTN3-214ENST00000545432 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
RTN3-214ENST00000545432 F6X3S4 739 aa18.68■□□□□ 0.58
RTN3-214ENST00000545432 MOGSQ13724 837 aa18.68■□□□□ 0.58
RTN3-214ENST00000545432 KAZALD1Q96I82 304 aa18.68■□□□□ 0.58
RTN3-214ENST00000545432 WRNIP1Q96S55 665 aa18.68■□□□□ 0.58
RTN3-214ENST00000545432 PUS3Q9BZE2 481 aaKnown RBP18.68■□□□□ 0.58
RTN3-214ENST00000545432 SUGT1Q9Y2Z0 365 aa18.68■□□□□ 0.58
RTN3-214ENST00000545432 CAPN2P17655 700 aa18.67■□□□□ 0.58
RTN3-214ENST00000545432 OSBPP22059 807 aa18.67■□□□□ 0.58
RTN3-214ENST00000545432 HOXD10P28358 340 aa18.67■□□□□ 0.58
RTN3-214ENST00000545432 GRK4P32298 578 aa18.67■□□□□ 0.58
RTN3-214ENST00000545432 PSMC4P43686 418 aa18.67■□□□□ 0.58
RTN3-214ENST00000545432 TEKT1Q969V4 418 aa18.67■□□□□ 0.58
RTN3-214ENST00000545432 A0A1W2PPC1 479 aa18.66■□□□□ 0.58
RTN3-214ENST00000545432 ALDH1L1O75891 902 aa18.66■□□□□ 0.58
RTN3-214ENST00000545432 MYCP01106 439 aaPredicted RBP18.66■□□□□ 0.58
RTN3-214ENST00000545432 HHIPL2Q6UWX4 724 aa18.66■□□□□ 0.58
RTN3-214ENST00000545432 DPF3Q92784 378 aa18.66■□□□□ 0.58
RTN3-214ENST00000545432 HTATIP2Q9BUP3 242 aa18.66■□□□□ 0.58
RTN3-214ENST00000545432 MROH5Q6ZUA9 1318 aa18.66■□□□□ 0.58
RTN3-214ENST00000545432 ZSWIM8A7E2V4 1837 aa18.65■□□□□ 0.58
RTN3-214ENST00000545432 CACNB3P54284 484 aa18.65■□□□□ 0.58
RTN3-214ENST00000545432 TAF7LQ5H9L4 462 aa18.65■□□□□ 0.58
RTN3-214ENST00000545432 DCAF15Q66K64 600 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms