RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 V9GY48 417 aaPredicted RBP8.49□□□□□ -1.05
SPPL3-209ENST00000545209 RAD50Q92878 1312 aa8.49□□□□□ -1.05
SPPL3-209ENST00000545209 CNTNAP4Q9C0A0 1308 aa8.49□□□□□ -1.05
SPPL3-209ENST00000545209 RFX7Q2KHR2 1363 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 ATRNO75882 1429 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 ANKRD18BA2A2Z9 1011 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 MCM2P49736 904 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 CWC27Q6UX04 472 aaKnown RBP8.48□□□□□ -1.05
SPPL3-209ENST00000545209 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 TICAM2Q86XR7 235 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 NEUROD6Q96NK8 337 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 UTP14AQ9BVJ6 771 aaKnown RBP8.48□□□□□ -1.05
SPPL3-209ENST00000545209 FAM117AQ9C073 453 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 CHMP5Q9NZZ3 219 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 DBNLQ9UJU6 430 aaKnown RBP8.48□□□□□ -1.05
SPPL3-209ENST00000545209 SH3TC1Q8TE82 1336 aa8.48□□□□□ -1.05
SPPL3-209ENST00000545209 ZNF609O15014 1411 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 NHSQ6T4R5 1651 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 CAMTA2O94983 1202 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 MMP16P51512 607 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 LRRFIP1Q32MZ4 808 aaKnown RBP8.47□□□□□ -1.05
SPPL3-209ENST00000545209 GORABQ5T7V8 394 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 RC3H1Q5TC82 1133 aaKnown RBP8.47□□□□□ -1.05
SPPL3-209ENST00000545209 CLEC4GQ6UXB4 293 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 ZNF594Q96JF6 807 aaPredicted RBP8.47□□□□□ -1.05
SPPL3-209ENST00000545209 HAUS7Q99871 368 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 DBNDD2Q9BQY9 259 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 ANTXR1Q9H6X2 564 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 FCF1Q9Y324 198 aaKnown RBP8.47□□□□□ -1.05
SPPL3-209ENST00000545209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
SPPL3-209ENST00000545209 UBN2Q6ZU65 1347 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 NUP98P52948 1817 aa8.47□□□□□ -1.05
SPPL3-209ENST00000545209 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
SPPL3-209ENST00000545209 ITGA6P23229 1130 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 HSPA4P34932 840 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 SLC19A1P41440 591 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 KCNJ4P48050 445 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 LRRC24Q50LG9 513 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 METTL24Q5JXM2 366 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 CCDC158Q5M9N0 1113 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 LDHAL6AQ6ZMR3 332 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 LINC00116Q8NCU8 138 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 TTLL11Q8NHH1 800 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 IL17RAQ96F46 866 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 CCDC85AQ96PX6 553 aaPredicted RBP8.46□□□□□ -1.06
SPPL3-209ENST00000545209 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
SPPL3-209ENST00000545209 LSG1Q9H089 658 aaKnown RBP8.46□□□□□ -1.06
SPPL3-209ENST00000545209 CNNM1Q9NRU3 951 aa8.46□□□□□ -1.06
SPPL3-209ENST00000545209 NIP7Q9Y221 180 aaKnown RBP eCLIP8.46□□□□□ -1.06
SPPL3-209ENST00000545209 COL5A3P25940 1745 aaPredicted RBP8.46□□□□□ -1.06
SPPL3-209ENST00000545209 A0A1B0GUL7 405 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
SPPL3-209ENST00000545209 NEK4P51957 841 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 NMIQ13287 307 aaPredicted RBP8.45□□□□□ -1.06
SPPL3-209ENST00000545209 MTMR2Q13614 643 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 NFKBIBQ15653 356 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 CCDC152Q4G0S7 254 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 TTC39AQ5SRH9 613 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 SUSD4Q5VX71 490 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.45□□□□□ -1.06
SPPL3-209ENST00000545209 EMID1Q96A84 441 aaPredicted RBP8.45□□□□□ -1.06
SPPL3-209ENST00000545209 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
SPPL3-209ENST00000545209 GREM2Q9H772 168 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 CCNL1Q9UK58 526 aaPredicted RBP8.45□□□□□ -1.06
SPPL3-209ENST00000545209 ABCC12Q96J65 1359 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 BTAF1O14981 1849 aa8.45□□□□□ -1.06
SPPL3-209ENST00000545209 MYH3P11055 1940 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 RPS6KA4O75676 772 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 CD2BP2O95400 341 aaKnown RBP8.44□□□□□ -1.06
SPPL3-209ENST00000545209 IFIT1P09914 478 aaKnown RBP8.44□□□□□ -1.06
SPPL3-209ENST00000545209 ZKSCAN1P17029 563 aaPredicted RBP8.44□□□□□ -1.06
SPPL3-209ENST00000545209 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
SPPL3-209ENST00000545209 TIMM10P62072 90 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 ATP2B3Q16720 1220 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 TUSC1Q2TAM9 212 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 RNF20Q5VTR2 975 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 LIAT1Q6ZQX7 453 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 SYNE4Q8N205 404 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 KBTBD3Q8NAB2 608 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 QTRT2Q9H974 415 aaKnown RBP8.44□□□□□ -1.06
SPPL3-209ENST00000545209 SNRKQ9NRH2 765 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 PAG1Q9NWQ8 432 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 RTCBQ9Y3I0 505 aaKnown RBP8.44□□□□□ -1.06
SPPL3-209ENST00000545209 CCDC171Q6TFL3 1326 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 MROH5Q6ZUA9 1318 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 RTL9Q8NET4 1388 aa8.44□□□□□ -1.06
SPPL3-209ENST00000545209 MYH14Q7Z406 1995 aaKnown RBP8.44□□□□□ -1.06
SPPL3-209ENST00000545209 BCORQ6W2J9 1755 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 FAM177BA6PVY3 158 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 GOLIM4O00461 696 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 NTSR2O95665 410 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 HCLS1P14317 486 aaPredicted RBP8.43□□□□□ -1.06
SPPL3-209ENST00000545209 JUNDP17535 347 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms