RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 EPHA10Q5JZY3 1008 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 VARS2Q5ST30 1063 aaKnown RBP9.25□□□□□ -0.93
CPSF7-224ENST00000544990 LDHDQ86WU2 507 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 SUCLG2Q96I99 432 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 DBNDD1Q9H9R9 158 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 CEP350Q5VT06 3117 aa9.25□□□□□ -0.93
CPSF7-224ENST00000544990 KCNJ4P48050 445 aa9.24□□□□□ -0.93
CPSF7-224ENST00000544990 SLC4A3P48751 1232 aa9.24□□□□□ -0.93
CPSF7-224ENST00000544990 EMP3P54852 163 aa9.24□□□□□ -0.93
CPSF7-224ENST00000544990 CHRNDQ07001 517 aa9.24□□□□□ -0.93
CPSF7-224ENST00000544990 LDHAL6AQ6ZMR3 332 aa9.24□□□□□ -0.93
CPSF7-224ENST00000544990 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
CPSF7-224ENST00000544990 USP44Q9H0E7 712 aa9.24□□□□□ -0.93
CPSF7-224ENST00000544990 CNNM1Q9NRU3 951 aa9.24□□□□□ -0.93
CPSF7-224ENST00000544990 YDJCA8MPS7 323 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 PSMD14O00487 310 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 UBTFL1P0CB47 393 aaPredicted RBP9.23□□□□□ -0.93
CPSF7-224ENST00000544990 EPS15P42566 896 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 SCNN1DP51172 638 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 PROX2Q3B8N5 592 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 USP50Q70EL3 339 aaPredicted RBP9.23□□□□□ -0.93
CPSF7-224ENST00000544990 PODNQ7Z5L7 613 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 FRAT1Q92837 279 aaPredicted RBP9.23□□□□□ -0.93
CPSF7-224ENST00000544990 KAZALD1Q96I82 304 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 BICC1Q9H694 974 aaKnown RBP9.23□□□□□ -0.93
CPSF7-224ENST00000544990 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
CPSF7-224ENST00000544990 GPRC5DQ9NZD1 345 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 ZNF804BA4D1E1 1349 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
CPSF7-224ENST00000544990 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 H7C1D1 291 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 BCAR3O75815 825 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 RPS12P25398 132 aaKnown RBP9.22□□□□□ -0.93
CPSF7-224ENST00000544990 PBX2P40425 430 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 PSEN2P49810 448 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 GMPSP49915 693 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-224ENST00000544990 RABL6Q3YEC7 729 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-224ENST00000544990 ATF7IPQ6VMQ6 1270 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 DPF2Q92785 391 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 ZNF594Q96JF6 807 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-224ENST00000544990 COA1Q9GZY4 146 aa9.22□□□□□ -0.93
CPSF7-224ENST00000544990 CNOT7Q9UIV1 285 aaKnown RBP9.22□□□□□ -0.93
CPSF7-224ENST00000544990 PLIN1O60240 522 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 ST18O60284 1047 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 TAF5LO75529 589 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 GNAI3P08754 354 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 VIL1P09327 827 aaKnown RBP9.21□□□□□ -0.94
CPSF7-224ENST00000544990 ZKSCAN2Q63HK3 967 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 INTS3Q68E01 1043 aaKnown RBP9.21□□□□□ -0.94
CPSF7-224ENST00000544990 HELBQ8NG08 1087 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-224ENST00000544990 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 PSME4Q14997 1843 aa9.21□□□□□ -0.94
CPSF7-224ENST00000544990 USP17L3A6NCW0 530 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 USP17L4A6NCW7 530 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-224ENST00000544990 SMAPO00193 183 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 TRIM27P14373 513 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 C15orf52Q6ZUT6 534 aaKnown RBP9.2□□□□□ -0.94
CPSF7-224ENST00000544990 USP17L1Q7RTZ2 530 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 CNTROBQ8N137 903 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 ANKRD44Q8N8A2 993 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 RDH13Q8NBN7 331 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 AGBL3Q8NEM8 1001 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 SCN9AQ15858 1988 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 MROH5Q6ZUA9 1318 aa9.2□□□□□ -0.94
CPSF7-224ENST00000544990 A0A1B0GUL6 1792 aa9.19□□□□□ -0.94
CPSF7-224ENST00000544990 ADAMTSL1Q8N6G6 1762 aa9.19□□□□□ -0.94
CPSF7-224ENST00000544990 UBE4AQ14139 1066 aa9.19□□□□□ -0.94
CPSF7-224ENST00000544990 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-224ENST00000544990 RSBN1LQ6PCB5 846 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-224ENST00000544990 ZNF804AQ7Z570 1209 aa9.19□□□□□ -0.94
CPSF7-224ENST00000544990 TXNRD3Q86VQ6 643 aa9.19□□□□□ -0.94
CPSF7-224ENST00000544990 CLUAP1Q96AJ1 413 aa9.19□□□□□ -0.94
CPSF7-224ENST00000544990 PUS3Q9BZE2 481 aaKnown RBP9.19□□□□□ -0.94
CPSF7-224ENST00000544990 RIPOR2Q9Y4F9 1068 aa9.19□□□□□ -0.94
CPSF7-224ENST00000544990 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 ITGBL1O95965 494 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-224ENST00000544990 CD46P15529 392 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 MMP14P50281 582 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 METTL24Q5JXM2 366 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 STRIP1Q5VSL9 837 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 MYSM1Q5VVJ2 828 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 TTLL5Q6EMB2 1281 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 FTSJ3Q8IY81 847 aaKnown RBP9.18□□□□□ -0.94
CPSF7-224ENST00000544990 DZIP1LQ8IYY4 767 aaKnown RBP9.18□□□□□ -0.94
CPSF7-224ENST00000544990 OGFOD1Q8N543 542 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 MYO3BQ8WXR4 1341 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 FAM163AQ96GL9 167 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-224ENST00000544990 MEIS3Q99687 375 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 CD209Q9NNX6 404 aa9.18□□□□□ -0.94
CPSF7-224ENST00000544990 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
CPSF7-224ENST00000544990 ZNF609O15014 1411 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms