RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PPP1R18Q6NYC8 613 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 HDGFL2Q7Z4V5 671 aaPredicted RBP8.44□□□□□ -1.06
CPSF7-222ENST00000544585 NT5DC4Q86YG4 428 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 GJD3Q8N144 294 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 TTC16Q8NEE8 873 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 ZCRB1Q8TBF4 217 aaKnown RBP8.44□□□□□ -1.06
CPSF7-222ENST00000544585 PIK3R5Q8WYR1 880 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 RNF34Q969K3 372 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 METTL5Q9NRN9 209 aaKnown RBP8.44□□□□□ -1.06
CPSF7-222ENST00000544585 KIAA1210Q9ULL0 1709 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 HSP90B1P14625 803 aaKnown RBP8.43□□□□□ -1.06
CPSF7-222ENST00000544585 ZAP70P43403 619 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 KCNQ4P56696 695 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 CLN3Q13286 438 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 FAM26DQ5JW98 314 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 NME9Q86XW9 330 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 L3MBTL2Q969R5 705 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 IFT43Q96FT9 208 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 NLRP3Q96P20 1036 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 AKAP12Q02952 1782 aa8.43□□□□□ -1.06
CPSF7-222ENST00000544585 UTRNP46939 3433 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 PDGFAP04085 211 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-222ENST00000544585 CENPCQ03188 943 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-222ENST00000544585 PUS7Q96PZ0 661 aaKnown RBP8.42□□□□□ -1.06
CPSF7-222ENST00000544585 RNF19AQ9NV58 838 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 TERF2IPQ9NYB0 399 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 KLK14Q9P0G3 267 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 HRH3Q9Y5N1 445 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 ANKRD36BQ8N2N9 1353 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 ATP10DQ9P241 1426 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 ABCC6O95255 1503 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 TRPM1Q7Z4N2 1603 aa8.42□□□□□ -1.06
CPSF7-222ENST00000544585 USP47Q96K76 1375 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 CGNL1Q0VF96 1302 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 WNT7AO00755 349 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 NEFLP07196 543 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 GNA15P30679 374 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 ZNF76P36508 570 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 FANCCQ00597 558 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 RAD51AP2Q09MP3 1159 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 METTL16Q86W50 562 aaKnown RBP8.41□□□□□ -1.06
CPSF7-222ENST00000544585 FBF1Q8TES7 1133 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 ZDHHC1Q8WTX9 485 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 LTV1Q96GA3 475 aaPredicted RBP8.41□□□□□ -1.06
CPSF7-222ENST00000544585 MRGPRX2Q96LB1 330 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 PHACTR1Q9C0D0 580 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 CCSER2Q9H7U1 834 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 PARP3Q9Y6F1 533 aa8.41□□□□□ -1.06
CPSF7-222ENST00000544585 NHSQ6T4R5 1651 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 MEN1O00255 615 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 TOMM70O94826 608 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 AMPHP49418 695 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 ZNF526Q8TF50 670 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-222ENST00000544585 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 NIFKQ9BYG3 293 aaKnown RBP8.4□□□□□ -1.06
CPSF7-222ENST00000544585 TGIF2Q9GZN2 237 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 SLC12A5Q9H2X9 1139 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.06
CPSF7-222ENST00000544585 PAPPAQ13219 1627 aa8.4□□□□□ -1.07
CPSF7-222ENST00000544585 RPLP1P05386 114 aaKnown RBP8.39□□□□□ -1.07
CPSF7-222ENST00000544585 NNTQ13423 1086 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 C8orf34Q49A92 452 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 C1orf53Q5VUE5 145 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
CPSF7-222ENST00000544585 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 DNAJC5GQ8N7S2 189 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 SMARCC1Q92922 1105 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-222ENST00000544585 COG3Q96JB2 828 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 FRMD6Q96NE9 622 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 ZSCAN10Q96SZ4 725 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-222ENST00000544585 HCSTQ9UBK5 93 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 WASF2Q9Y6W5 498 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 RGPD5Q99666 1765 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 PIK3C2AO00443 1686 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 NFAT5O94916 1531 aa8.39□□□□□ -1.07
CPSF7-222ENST00000544585 ROCK2O75116 1388 aaKnown RBP8.38□□□□□ -1.07
CPSF7-222ENST00000544585 ALDH1A1P00352 501 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 HOXC9P31274 260 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 PTGIRP43119 386 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 CBLBQ13191 982 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 GNL2Q13823 731 aaKnown RBP8.38□□□□□ -1.07
CPSF7-222ENST00000544585 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 RAPGEF4Q8WZA2 1011 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 TANGO6Q9C0B7 1094 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 BTAF1O14981 1849 aa8.38□□□□□ -1.07
CPSF7-222ENST00000544585 SHANK3Q9BYB0 1731 aa8.37□□□□□ -1.07
CPSF7-222ENST00000544585 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
CPSF7-222ENST00000544585 TATP17735 454 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-222ENST00000544585 KDF1Q8NAX2 398 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-222ENST00000544585 CAPN10Q9HC96 672 aa8.37□□□□□ -1.07
CPSF7-222ENST00000544585 SPG7Q9UQ90 795 aa8.37□□□□□ -1.07
CPSF7-222ENST00000544585 AK5Q9Y6K8 562 aa8.37□□□□□ -1.07
CPSF7-222ENST00000544585 WNK3Q9BYP7 1800 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms