RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 GSTM4Q03013 218 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 HP1BP3Q5SSJ5 553 aaPredicted RBP4.01□□□□□ -1.77
YBX3-214ENST00000544501 SCARA3Q6AZY7 606 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 TMEM151AQ8N4L1 468 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 NOC4LQ9BVI4 516 aaKnown RBP4.01□□□□□ -1.77
YBX3-214ENST00000544501 NRSN2Q9GZP1 204 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 GPN3Q9UHW5 284 aaPredicted RBP4.01□□□□□ -1.77
YBX3-214ENST00000544501 TTF2Q9UNY4 1162 aaKnown RBP4.01□□□□□ -1.77
YBX3-214ENST00000544501 SAMM50Q9Y512 469 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 MEGF11A6BM72 1044 aa4□□□□□ -1.77
YBX3-214ENST00000544501 ENC1O14682 589 aa4□□□□□ -1.77
YBX3-214ENST00000544501 ADAM11O75078 769 aa4□□□□□ -1.77
YBX3-214ENST00000544501 NME2P22392 152 aa4□□□□□ -1.77
YBX3-214ENST00000544501 NLRP12P59046 1061 aa4□□□□□ -1.77
YBX3-214ENST00000544501 HNRNPUQ00839 825 aaKnown RBP eCLIP4□□□□□ -1.77
YBX3-214ENST00000544501 ADGRE1Q14246 886 aa4□□□□□ -1.77
YBX3-214ENST00000544501 POU4F3Q15319 338 aa4□□□□□ -1.77
YBX3-214ENST00000544501 DUOXA2Q1HG44 320 aa4□□□□□ -1.77
YBX3-214ENST00000544501 HGSNATQ68CP4 663 aa4□□□□□ -1.77
YBX3-214ENST00000544501 SHISA2Q6UWI4 295 aa4□□□□□ -1.77
YBX3-214ENST00000544501 TPTE2Q6XPS3 522 aa4□□□□□ -1.77
YBX3-214ENST00000544501 MRRFQ96E11 262 aaKnown RBP4□□□□□ -1.77
YBX3-214ENST00000544501 CORO1BQ9BR76 489 aa4□□□□□ -1.77
YBX3-214ENST00000544501 TRIM56Q9BRZ2 755 aaKnown RBP4□□□□□ -1.77
YBX3-214ENST00000544501 EMILIN2Q9BXX0 1053 aa4□□□□□ -1.77
YBX3-214ENST00000544501 AKTIPQ9H8T0 292 aa4□□□□□ -1.77
YBX3-214ENST00000544501 KCNK4Q9NYG8 393 aa4□□□□□ -1.77
YBX3-214ENST00000544501 USP21Q9UK80 565 aa4□□□□□ -1.77
YBX3-214ENST00000544501 SYNGAP1Q96PV0 1343 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 LOC100289279A0A1B0GTE1 492 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 C1QTNF9BB2RNN3 333 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 F8W735 103 aaPredicted RBP3.99□□□□□ -1.77
YBX3-214ENST00000544501 DDX3YO15523 660 aaKnown RBP3.99□□□□□ -1.77
YBX3-214ENST00000544501 MAOBP27338 520 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 ARNTP27540 789 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 MBTPS1Q14703 1052 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 CCDC85BQ15834 202 aaPredicted RBP3.99□□□□□ -1.77
YBX3-214ENST00000544501 EXOSC6Q5RKV6 272 aaKnown RBP3.99□□□□□ -1.77
YBX3-214ENST00000544501 MEI1Q5TIA1 1274 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.99□□□□□ -1.77
YBX3-214ENST00000544501 CD163Q86VB7 1156 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 SULF2Q8IWU5 870 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 RNF208Q9H0X6 261 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 CYP8B1Q9UNU6 501 aa3.99□□□□□ -1.77
YBX3-214ENST00000544501 UNCXA6NJT0 531 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 GSTP1P09211 210 aaKnown RBP3.98□□□□□ -1.77
YBX3-214ENST00000544501 BMP6P22004 513 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 CHRNA4P43681 627 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 ZNF157P51786 506 aaPredicted RBP3.98□□□□□ -1.77
YBX3-214ENST00000544501 RPS26P62854 115 aaKnown RBP3.98□□□□□ -1.77
YBX3-214ENST00000544501 LRRC14Q15048 493 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 PLA2G4EQ3MJ16 856 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 LDLRAD1Q5T700 205 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 ANKRD34AQ69YU3 496 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 Q6ZS46 218 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 KIAA1211Q6ZU35 1233 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 ACAD11Q709F0 780 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 PDZD3Q86UT5 571 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 TXNRD3Q86VQ6 643 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 UBASH3BQ8TF42 649 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 WFDC12Q8WWY7 111 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 RUSC1Q9BVN2 902 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 USP26Q9BXU7 913 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 TMPRSS13Q9BYE2 586 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 CEP41Q9BYV8 373 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 BACH2Q9BYV9 841 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 SUGCTQ9HAC7 445 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 METTL5Q9NRN9 209 aaKnown RBP3.98□□□□□ -1.77
YBX3-214ENST00000544501 KRT82Q9NSB4 513 aa3.98□□□□□ -1.77
YBX3-214ENST00000544501 FBXO24O75426 580 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 PAGE1O75459 146 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 WISP1O95388 367 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 DLGAP3O95886 979 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 IGHA1P01876 353 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 CELA3AP09093 270 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 NOS3P29474 1203 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 ZNF252P-AS1Q0IIN9 211 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 PWP1Q13610 501 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 NUTM2GQ5VZR2 741 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 PCNX4Q63HM2 1172 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 TTBK2Q6IQ55 1244 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 DZIP1LQ8IYY4 767 aaKnown RBP3.97□□□□□ -1.77
YBX3-214ENST00000544501 TMEM87AQ8NBN3 555 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 SMG8Q8ND04 991 aaKnown RBP3.97□□□□□ -1.77
YBX3-214ENST00000544501 RSRP1Q9BUV0 290 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 CYP4F12Q9HCS2 524 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 CACNA2D2Q9NY47 1150 aa3.97□□□□□ -1.77
YBX3-214ENST00000544501 KIAA1522Q9P206 1035 aaPredicted RBP3.97□□□□□ -1.77
YBX3-214ENST00000544501 SCAMP3O14828 347 aaKnown RBP3.96□□□□□ -1.78
YBX3-214ENST00000544501 TRIM37O94972 964 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 RECKO95980 971 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 ITGB2P05107 769 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 SLFN14P0C7P3 912 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 GATA4P43694 442 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 IREB2P48200 963 aaKnown RBP3.96□□□□□ -1.78
YBX3-214ENST00000544501 TSNAXIP1Q2TAA8 658 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 KIF4BQ2VIQ3 1234 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 UVSSAQ2YD98 709 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 LLGL2Q6P1M3 1020 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 AGMOQ6ZNB7 445 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms