RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 ZNF70Q9UC06 446 aaPredicted RBP17.25■□□□□ 0.35
VAMP1-208ENST00000544432 CLRN2A0PK11 232 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 SLC10A3P09131 477 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 TNFAIP1Q13829 316 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 SUPT20HL1Q3ZLR7 823 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 TEKT1Q969V4 418 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 ZDHHC15Q96MV8 337 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 DENND2AQ9ULE3 1009 aa17.24■□□□□ 0.35
VAMP1-208ENST00000544432 AOX1Q06278 1338 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 UBE2Q2LH0YL09 131 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 HSPA8P11142 646 aaKnown RBP17.23■□□□□ 0.35
VAMP1-208ENST00000544432 TIMM10P62072 90 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 TFCP2Q12800 502 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 G3BP1Q13283 466 aaKnown RBP eCLIP17.23■□□□□ 0.35
VAMP1-208ENST00000544432 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 HHIPL2Q6UWX4 724 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
VAMP1-208ENST00000544432 ARAP2Q8WZ64 1704 aa17.23■□□□□ 0.35
VAMP1-208ENST00000544432 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
VAMP1-208ENST00000544432 SALL1Q9NSC2 1324 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 A0A1B0GUL7 405 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 UNCXA6NJT0 531 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 PHKA1P46020 1223 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 MAP3K11Q16584 847 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 LDLRAD1Q5T700 205 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 MOB2Q70IA6 237 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 ZIC5Q96T25 663 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 TDRD3Q9H7E2 651 aaKnown RBP17.22■□□□□ 0.35
VAMP1-208ENST00000544432 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
VAMP1-208ENST00000544432 ECM29Q5VYK3 1845 aa17.21■□□□□ 0.35
VAMP1-208ENST00000544432 ADORA1P30542 326 aa17.21■□□□□ 0.35
VAMP1-208ENST00000544432 LBX1P52954 281 aa17.21■□□□□ 0.35
VAMP1-208ENST00000544432 KIF23Q02241 960 aaPredicted RBP17.21■□□□□ 0.35
VAMP1-208ENST00000544432 TTLL12Q14166 644 aaPredicted RBP17.21■□□□□ 0.35
VAMP1-208ENST00000544432 RASA3Q14644 834 aa17.21■□□□□ 0.35
VAMP1-208ENST00000544432 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
VAMP1-208ENST00000544432 RASAL3Q86YV0 1011 aa17.21■□□□□ 0.35
VAMP1-208ENST00000544432 XAGE2Q96GT9 111 aa17.21■□□□□ 0.35
VAMP1-208ENST00000544432 RCAN3Q9UKA8 241 aa17.21■□□□□ 0.35
VAMP1-208ENST00000544432 PPP1R12BO60237 982 aaPredicted RBP17.2■□□□□ 0.34
VAMP1-208ENST00000544432 FKBP1CQ5VVH2 108 aa17.2■□□□□ 0.34
VAMP1-208ENST00000544432 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
VAMP1-208ENST00000544432 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
VAMP1-208ENST00000544432 PANK1Q8TE04 598 aa17.2■□□□□ 0.34
VAMP1-208ENST00000544432 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
VAMP1-208ENST00000544432 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
VAMP1-208ENST00000544432 TNNI2P48788 182 aa17.19■□□□□ 0.34
VAMP1-208ENST00000544432 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.19■□□□□ 0.34
VAMP1-208ENST00000544432 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
VAMP1-208ENST00000544432 NBPF12Q5TAG4 269 aaPredicted RBP17.18■□□□□ 0.34
VAMP1-208ENST00000544432 FAM83AQ86UY5 434 aa17.18■□□□□ 0.34
VAMP1-208ENST00000544432 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
VAMP1-208ENST00000544432 TEPSINQ96N21 525 aa17.18■□□□□ 0.34
VAMP1-208ENST00000544432 NEUROD6Q96NK8 337 aa17.18■□□□□ 0.34
VAMP1-208ENST00000544432 CSRNP1Q96S65 589 aa17.18■□□□□ 0.34
VAMP1-208ENST00000544432 C1orf115Q9H7X2 142 aa17.18■□□□□ 0.34
VAMP1-208ENST00000544432 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
VAMP1-208ENST00000544432 ANGEL1Q9UNK9 670 aaKnown RBP17.18■□□□□ 0.34
VAMP1-208ENST00000544432 SSC5DA1L4H1 1573 aa17.17■□□□□ 0.34
VAMP1-208ENST00000544432 PRDX5P30044 214 aa17.17■□□□□ 0.34
VAMP1-208ENST00000544432 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
VAMP1-208ENST00000544432 TMOD2Q9NZR1 351 aa17.17■□□□□ 0.34
VAMP1-208ENST00000544432 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
VAMP1-208ENST00000544432 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
VAMP1-208ENST00000544432 IREB2P48200 963 aaKnown RBP17.16■□□□□ 0.34
VAMP1-208ENST00000544432 PRKG1Q13976 671 aa17.16■□□□□ 0.34
VAMP1-208ENST00000544432 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
VAMP1-208ENST00000544432 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
VAMP1-208ENST00000544432 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
VAMP1-208ENST00000544432 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
VAMP1-208ENST00000544432 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
VAMP1-208ENST00000544432 USP2O75604 605 aaPredicted RBP17.15■□□□□ 0.34
VAMP1-208ENST00000544432 ARID4AP29374 1257 aaPredicted RBP17.15■□□□□ 0.34
VAMP1-208ENST00000544432 GORABQ5T7V8 394 aa17.15■□□□□ 0.34
VAMP1-208ENST00000544432 SLC10A4Q96EP9 437 aa17.15■□□□□ 0.34
VAMP1-208ENST00000544432 FAM163AQ96GL9 167 aaPredicted RBP17.15■□□□□ 0.34
VAMP1-208ENST00000544432 MYH13Q9UKX3 1938 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 TM4SF4P48230 202 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
VAMP1-208ENST00000544432 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 SLF2Q8IX21 1173 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
VAMP1-208ENST00000544432 TMEM39BQ9GZU3 492 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 RNF186Q9NXI6 227 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
VAMP1-208ENST00000544432 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 CDC42EP5Q6NZY7 148 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 ANKRD13AQ8IZ07 590 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
VAMP1-208ENST00000544432 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 HOOK2Q96ED9 719 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 FZD1Q9UP38 647 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms