RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 VPS16Q9H269 839 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 ZNF174Q15697 407 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 CCDC14Q49A88 953 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 CCDC26Q8TAB7 109 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 VWA3AA6NCI4 1184 aa17.36■□□□□ 0.37
CHD4-210ENST00000544040 RFC1P35251 1148 aaPredicted RBP17.35■□□□□ 0.37
CHD4-210ENST00000544040 FMNL3Q8IVF7 1028 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.35■□□□□ 0.37
CHD4-210ENST00000544040 GRM1Q13255 1194 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 FYB2Q5VWT5 728 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 DTHD1Q6ZMT9 781 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 HS2ST1Q7LGA3 356 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 CACNA2D3Q8IZS8 1091 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 XAGE3Q8WTP9 111 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 PPANQ9NQ55 473 aaKnown RBP17.35■□□□□ 0.37
CHD4-210ENST00000544040 PDE1CQ14123 709 aaPredicted RBP17.35■□□□□ 0.37
CHD4-210ENST00000544040 IFNL2Q8IZJ0 200 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
CHD4-210ENST00000544040 E7EVH7 732 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 HARSP12081 509 aaKnown RBP17.35■□□□□ 0.37
CHD4-210ENST00000544040 GBP1P32455 592 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 C8orf34Q49A92 452 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 CREB3L3Q68CJ9 461 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
CHD4-210ENST00000544040 CCDC170Q8IYT3 715 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 IFT74Q96LB3 600 aa17.35■□□□□ 0.37
CHD4-210ENST00000544040 SPOPO43791 374 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 GNAQP50148 359 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 JAKMIP2Q96AA8 810 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 CNGA4Q8IV77 575 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 LMNTD2Q8IXW0 634 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 MAGEB6Q8N7X4 407 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 MAPK8IP1Q9UQF2 711 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 C8orf74Q6P047 294 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 SNX21Q969T3 373 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 NAPGQ99747 312 aaPredicted RBP17.34■□□□□ 0.37
CHD4-210ENST00000544040 INPP5BP32019 993 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 ST5P78524 1137 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 CLUL1Q15846 466 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 JAG2Q9Y219 1238 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 B4GALNT4Q76KP1 1039 aa17.34■□□□□ 0.37
CHD4-210ENST00000544040 GOLGA6CA6NDK9 693 aa17.33■□□□□ 0.37
CHD4-210ENST00000544040 RIOK3O14730 519 aaKnown RBP17.33■□□□□ 0.37
CHD4-210ENST00000544040 GOLGA6DP0CG33 693 aa17.33■□□□□ 0.37
CHD4-210ENST00000544040 CPA1P15085 419 aa17.33■□□□□ 0.37
CHD4-210ENST00000544040 PPP2R5DQ14738 602 aa17.33■□□□□ 0.37
CHD4-210ENST00000544040 ELF2Q15723 593 aa17.33■□□□□ 0.37
CHD4-210ENST00000544040 IGSF22Q8N9C0 903 aa17.33■□□□□ 0.37
CHD4-210ENST00000544040 GOLGA6AQ9NYA3 693 aa17.33■□□□□ 0.37
CHD4-210ENST00000544040 CASQ2O14958 399 aaPredicted RBP17.33■□□□□ 0.37
CHD4-210ENST00000544040 RTL9Q8NET4 1388 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 A0A1B0GUA9 196 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 PPP2R5CQ13362 524 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 PLEKHA4Q9H4M7 779 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 ATP5DP30049 168 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 RUFY3Q7L099 469 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 KIFC2Q96AC6 838 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 CARD6Q9BX69 1037 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 TXNDC9O14530 226 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 TUBB4BP68371 445 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 SLC39A6Q13433 755 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 COPS6Q7L5N1 327 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 GBP7Q8N8V2 638 aaPredicted RBP17.33■□□□□ 0.36
CHD4-210ENST00000544040 SIRT1Q96EB6 747 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 TNNQ9UQP3 1299 aa17.33■□□□□ 0.36
CHD4-210ENST00000544040 UTP11Q9Y3A2 253 aaKnown RBP17.33■□□□□ 0.36
CHD4-210ENST00000544040 GPR161Q8N6U8 529 aaKnown RBP17.32■□□□□ 0.36
CHD4-210ENST00000544040 ERO1AQ96HE7 468 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 TRAF5O00463 557 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 PSMB7Q99436 277 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 RBSNQ9H1K0 784 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 MYL5Q02045 173 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 SDCCAG8Q86SQ7 713 aaPredicted RBP17.32■□□□□ 0.36
CHD4-210ENST00000544040 VCX3BQ9H321 246 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
CHD4-210ENST00000544040 SARNPP82979 210 aaKnown RBP17.32■□□□□ 0.36
CHD4-210ENST00000544040 SATB1Q01826 763 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 MSANTD4Q8NCY6 345 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 MCM9Q9NXL9 1143 aa17.32■□□□□ 0.36
CHD4-210ENST00000544040 VGLL3A8MV65 326 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 CHRNA2Q15822 529 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 HAUS7Q99871 368 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 MCUR1Q96AQ8 359 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
CHD4-210ENST00000544040 SWAP70Q9UH65 585 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 TNFAIP3P21580 790 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 CALML3P27482 149 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 BIRC3Q13489 604 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 PNMA8AQ86V59 439 aaPredicted RBP17.31■□□□□ 0.36
CHD4-210ENST00000544040 WWC3Q9ULE0 1092 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 FRMD4BQ9Y2L6 1034 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 ATP8B2P98198 1209 aa17.31■□□□□ 0.36
CHD4-210ENST00000544040 RNF113AO15541 343 aaKnown RBP17.3■□□□□ 0.36
CHD4-210ENST00000544040 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
CHD4-210ENST00000544040 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 GAS8O95995 478 aa17.3■□□□□ 0.36
CHD4-210ENST00000544040 KLHL7Q8IXQ5 586 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms