RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PGAP2Q9UHJ9 254 aa18.46■□□□□ 0.55
CD9-210ENST00000543916 NDUFB9Q9Y6M9 179 aa18.46■□□□□ 0.55
CD9-210ENST00000543916 POLR2AP24928 1970 aaKnown RBP18.46■□□□□ 0.55
CD9-210ENST00000543916 WNT10BO00744 389 aa18.45■□□□□ 0.54
CD9-210ENST00000543916 CYP2E1P05181 493 aaPredicted RBP18.45■□□□□ 0.54
CD9-210ENST00000543916 CRKP46108 304 aa18.45■□□□□ 0.54
CD9-210ENST00000543916 DLGAP5Q15398 846 aa18.45■□□□□ 0.54
CD9-210ENST00000543916 ZGPATQ8N5A5 531 aaKnown RBP18.45■□□□□ 0.54
CD9-210ENST00000543916 MTMR14Q8NCE2 650 aa18.45■□□□□ 0.54
CD9-210ENST00000543916 OTUD7AQ8TE49 926 aaPredicted RBP18.45■□□□□ 0.54
CD9-210ENST00000543916 SERPINA10Q9UK55 444 aa18.45■□□□□ 0.54
CD9-210ENST00000543916 MAST3O60307 1309 aa18.45■□□□□ 0.54
CD9-210ENST00000543916 AOX1Q06278 1338 aa18.45■□□□□ 0.54
CD9-210ENST00000543916 FSTL1Q12841 308 aa18.44■□□□□ 0.54
CD9-210ENST00000543916 B4GALNT3Q6L9W6 998 aa18.44■□□□□ 0.54
CD9-210ENST00000543916 ZC3H15Q8WU90 426 aaKnown RBP18.44■□□□□ 0.54
CD9-210ENST00000543916 GGA3Q9NZ52 723 aa18.44■□□□□ 0.54
CD9-210ENST00000543916 SPDYE2BA6NHP3 402 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 SPDYE6P0CI01 402 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 ATP5JP18859 108 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 RBM5P52756 815 aaKnown RBP eCLIP18.43■□□□□ 0.54
CD9-210ENST00000543916 C1QTNF8P60827 252 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 HDLBPQ00341 1268 aaKnown RBP18.43■□□□□ 0.54
CD9-210ENST00000543916 DIXDC1Q155Q3 683 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 ZNF384Q8TF68 577 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.43■□□□□ 0.54
CD9-210ENST00000543916 PRMT6Q96LA8 375 aaPredicted RBP18.43■□□□□ 0.54
CD9-210ENST00000543916 PIH1D3Q9NQM4 214 aaKnown RBP18.43■□□□□ 0.54
CD9-210ENST00000543916 SALL3Q9BXA9 1300 aa18.43■□□□□ 0.54
CD9-210ENST00000543916 ITGBL1O95965 494 aaPredicted RBP18.42■□□□□ 0.54
CD9-210ENST00000543916 NEFLP07196 543 aa18.42■□□□□ 0.54
CD9-210ENST00000543916 ANGEL2Q5VTE6 544 aaKnown RBP18.42■□□□□ 0.54
CD9-210ENST00000543916 SPTY2D1Q68D10 685 aaPredicted RBP18.42■□□□□ 0.54
CD9-210ENST00000543916 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
CD9-210ENST00000543916 CNTROBQ8N137 903 aa18.42■□□□□ 0.54
CD9-210ENST00000543916 TEKT1Q969V4 418 aa18.42■□□□□ 0.54
CD9-210ENST00000543916 MRIQ9BWK5 157 aa18.42■□□□□ 0.54
CD9-210ENST00000543916 ANTXR1Q9H6X2 564 aa18.42■□□□□ 0.54
CD9-210ENST00000543916 ECHDC1Q9NTX5 307 aa18.42■□□□□ 0.54
CD9-210ENST00000543916 NUCB1Q02818 461 aa18.41■□□□□ 0.54
CD9-210ENST00000543916 MECOMQ03112 1051 aa18.41■□□□□ 0.54
CD9-210ENST00000543916 DZIP1Q86YF9 867 aaKnown RBP18.41■□□□□ 0.54
CD9-210ENST00000543916 ZDHHC15Q96MV8 337 aa18.41■□□□□ 0.54
CD9-210ENST00000543916 GLIS2Q9BZE0 524 aaPredicted RBP18.41■□□□□ 0.54
CD9-210ENST00000543916 LNPKQ9C0E8 428 aa18.41■□□□□ 0.54
CD9-210ENST00000543916 BOLA2Q9H3K6 86 aa18.41■□□□□ 0.54
CD9-210ENST00000543916 ZBTB47Q9UFB7 747 aaPredicted RBP18.41■□□□□ 0.54
CD9-210ENST00000543916 SCAF8Q9UPN6 1271 aaKnown RBP18.41■□□□□ 0.54
CD9-210ENST00000543916 DAGLAQ9Y4D2 1042 aa18.41■□□□□ 0.54
CD9-210ENST00000543916 TRPM7Q96QT4 1865 aa18.41■□□□□ 0.54
CD9-210ENST00000543916 FMR1Q06787 632 aaKnown RBP eCLIP18.4■□□□□ 0.54
CD9-210ENST00000543916 HHIPL2Q6UWX4 724 aa18.4■□□□□ 0.54
CD9-210ENST00000543916 CHD1LQ86WJ1 897 aa18.4■□□□□ 0.54
CD9-210ENST00000543916 DCPSQ96C86 337 aaKnown RBP18.4■□□□□ 0.54
CD9-210ENST00000543916 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
CD9-210ENST00000543916 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
CD9-210ENST00000543916 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
CD9-210ENST00000543916 RAI14Q9P0K7 980 aa18.4■□□□□ 0.54
CD9-210ENST00000543916 LRP2BPQ9P2M1 347 aa18.4■□□□□ 0.54
CD9-210ENST00000543916 MYH7P12883 1935 aa18.4■□□□□ 0.54
CD9-210ENST00000543916 PITPNM2Q9BZ72 1349 aa18.4■□□□□ 0.54
CD9-210ENST00000543916 CLRN2A0PK11 232 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 ADM5C9JUS6 153 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 TRAF5O00463 557 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 MX1P20591 662 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 APOBEC3HQ6NTF7 200 aaKnown RBP18.39■□□□□ 0.53
CD9-210ENST00000543916 DLK2Q6UY11 383 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 NSUN4Q96CB9 384 aaKnown RBP18.39■□□□□ 0.53
CD9-210ENST00000543916 HAUS7Q99871 368 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 TDRD3Q9H7E2 651 aaKnown RBP18.39■□□□□ 0.53
CD9-210ENST00000543916 GAKO14976 1311 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 PASKQ96RG2 1323 aa18.39■□□□□ 0.53
CD9-210ENST00000543916 GOLIM4O00461 696 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 CDC37L1Q7L3B6 337 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 PI4K2BQ8TCG2 481 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 MROH7-TTC4A0A0A0MT08 1334 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
CD9-210ENST00000543916 MYO1BO43795 1136 aa18.37■□□□□ 0.53
CD9-210ENST00000543916 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
CD9-210ENST00000543916 ZNF70Q9UC06 446 aaPredicted RBP18.37■□□□□ 0.53
CD9-210ENST00000543916 GSTO1P78417 241 aa18.36■□□□□ 0.53
CD9-210ENST00000543916 TTF1Q15361 905 aaPredicted RBP18.36■□□□□ 0.53
CD9-210ENST00000543916 APOBEC3FQ8IUX4 373 aaKnown RBP18.36■□□□□ 0.53
CD9-210ENST00000543916 SULF1Q8IWU6 871 aa18.36■□□□□ 0.53
CD9-210ENST00000543916 SLF2Q8IX21 1173 aa18.36■□□□□ 0.53
CD9-210ENST00000543916 FAM163AQ96GL9 167 aaPredicted RBP18.36■□□□□ 0.53
CD9-210ENST00000543916 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
CD9-210ENST00000543916 VEZTQ9HBM0 779 aa18.36■□□□□ 0.53
CD9-210ENST00000543916 STAP2Q9UGK3 403 aa18.36■□□□□ 0.53
CD9-210ENST00000543916 CACNB3P54284 484 aa18.35■□□□□ 0.53
CD9-210ENST00000543916 PDE1AP54750 535 aa18.35■□□□□ 0.53
CD9-210ENST00000543916 NAA16Q6N069 864 aaPredicted RBP18.35■□□□□ 0.53
CD9-210ENST00000543916 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
CD9-210ENST00000543916 ERC2O15083 957 aa18.34■□□□□ 0.53
CD9-210ENST00000543916 BTDP43251 543 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms