RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 BICC1Q9H694 974 aaKnown RBP28.5■■■□□ 2.15
CDKN3-207ENST00000543789 TNNI2P48788 182 aa28.49■■■□□ 2.15
CDKN3-207ENST00000543789 RABL6Q3YEC7 729 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-207ENST00000543789 CAVIN4Q5BKX8 364 aa28.48■■■□□ 2.15
CDKN3-207ENST00000543789 METTL24Q5JXM2 366 aa28.48■■■□□ 2.15
CDKN3-207ENST00000543789 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-207ENST00000543789 CDAN1Q8IWY9 1227 aa28.48■■■□□ 2.15
CDKN3-207ENST00000543789 CD99L2Q8TCZ2 262 aa28.48■■■□□ 2.15
CDKN3-207ENST00000543789 TMEM39BQ9GZU3 492 aa28.48■■■□□ 2.15
CDKN3-207ENST00000543789 IQSEC3Q9UPP2 1182 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-207ENST00000543789 FRAT2O75474 233 aaPredicted RBP28.47■■■□□ 2.15
CDKN3-207ENST00000543789 MAP3K9P80192 1104 aa28.47■■■□□ 2.15
CDKN3-207ENST00000543789 HDLBPQ00341 1268 aaKnown RBP28.47■■■□□ 2.15
CDKN3-207ENST00000543789 SP3Q02447 781 aa28.47■■■□□ 2.15
CDKN3-207ENST00000543789 CHAF1AQ13111 956 aaPredicted RBP28.47■■■□□ 2.15
CDKN3-207ENST00000543789 GRIK5Q16478 980 aa28.47■■■□□ 2.15
CDKN3-207ENST00000543789 LRRC24Q50LG9 513 aa28.47■■■□□ 2.15
CDKN3-207ENST00000543789 TBC1D22AQ8WUA7 517 aa28.47■■■□□ 2.15
CDKN3-207ENST00000543789 MS4A4AQ96JQ5 239 aa28.47■■■□□ 2.15
CDKN3-207ENST00000543789 PTPN22Q9Y2R2 807 aa28.47■■■□□ 2.15
CDKN3-207ENST00000543789 EFCC1Q9HA90 598 aa28.46■■■□□ 2.15
CDKN3-207ENST00000543789 ZNF316A6NFI3 1004 aaPredicted RBP28.44■■■□□ 2.14
CDKN3-207ENST00000543789 PDE8BO95263 885 aa28.44■■■□□ 2.14
CDKN3-207ENST00000543789 VGLL4Q14135 290 aa28.44■■■□□ 2.14
CDKN3-207ENST00000543789 MRPL50Q8N5N7 158 aaKnown RBP28.44■■■□□ 2.14
CDKN3-207ENST00000543789 ANKRD44Q8N8A2 993 aa28.44■■■□□ 2.14
CDKN3-207ENST00000543789 CNKSR2Q8WXI2 1034 aa28.44■■■□□ 2.14
CDKN3-207ENST00000543789 CSADQ9Y600 493 aa28.44■■■□□ 2.14
CDKN3-207ENST00000543789 A0A1B0GUL6 1792 aa28.43■■■□□ 2.14
CDKN3-207ENST00000543789 GTF2A2P52657 109 aa28.43■■■□□ 2.14
CDKN3-207ENST00000543789 VGLL2Q8N8G2 317 aa28.43■■■□□ 2.14
CDKN3-207ENST00000543789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.43■■■□□ 2.14
CDKN3-207ENST00000543789 TEKT1Q969V4 418 aa28.43■■■□□ 2.14
CDKN3-207ENST00000543789 MRIQ9BWK5 157 aa28.43■■■□□ 2.14
CDKN3-207ENST00000543789 POTEFA5A3E0 1075 aa28.42■■■□□ 2.14
CDKN3-207ENST00000543789 BRI3BPQ8WY22 251 aa28.42■■■□□ 2.14
CDKN3-207ENST00000543789 CCL15-CCL14A0A0B4J2E2 113 aa28.41■■■□□ 2.14
CDKN3-207ENST00000543789 BCAMP50895 628 aa28.41■■■□□ 2.14
CDKN3-207ENST00000543789 CCL15Q16663 113 aa28.41■■■□□ 2.14
CDKN3-207ENST00000543789 ZFYVE28Q9HCC9 887 aa28.41■■■□□ 2.14
CDKN3-207ENST00000543789 ECM29Q5VYK3 1845 aa28.41■■■□□ 2.14
CDKN3-207ENST00000543789 PTPRCP08575 1304 aa28.41■■■□□ 2.14
CDKN3-207ENST00000543789 ZNF521Q96K83 1311 aa28.41■■■□□ 2.14
CDKN3-207ENST00000543789 ARMC5Q96C12 935 aa28.4■■■□□ 2.14
CDKN3-207ENST00000543789 ZDHHC15Q96MV8 337 aa28.4■■■□□ 2.14
CDKN3-207ENST00000543789 TMOD2Q9NZR1 351 aa28.4■■■□□ 2.14
CDKN3-207ENST00000543789 CACNB3P54284 484 aa28.39■■■□□ 2.14
CDKN3-207ENST00000543789 ARHGEF6Q15052 776 aa28.39■■■□□ 2.14
CDKN3-207ENST00000543789 TAF1CQ15572 869 aaPredicted RBP28.39■■■□□ 2.14
CDKN3-207ENST00000543789 KLHDC4Q8TBB5 520 aa28.39■■■□□ 2.14
CDKN3-207ENST00000543789 OTUD5Q96G74 571 aa28.39■■■□□ 2.14
CDKN3-207ENST00000543789 SUGT1Q9Y2Z0 365 aa28.39■■■□□ 2.14
CDKN3-207ENST00000543789 ZEB1P37275 1124 aaPredicted RBP28.38■■■□□ 2.13
CDKN3-207ENST00000543789 CAP1Q01518 475 aa28.38■■■□□ 2.13
CDKN3-207ENST00000543789 USP44Q9H0E7 712 aa28.38■■■□□ 2.13
CDKN3-207ENST00000543789 IFIT1P09914 478 aaKnown RBP28.37■■■□□ 2.13
CDKN3-207ENST00000543789 PUM3Q15397 648 aaKnown RBP28.37■■■□□ 2.13
CDKN3-207ENST00000543789 FKBP1CQ5VVH2 108 aa28.37■■■□□ 2.13
CDKN3-207ENST00000543789 APOBEC3HQ6NTF7 200 aaKnown RBP28.37■■■□□ 2.13
CDKN3-207ENST00000543789 FAM83AQ86UY5 434 aa28.37■■■□□ 2.13
CDKN3-207ENST00000543789 HOOK2Q96ED9 719 aa28.37■■■□□ 2.13
CDKN3-207ENST00000543789 SPDYE5A6NIY4 337 aa28.36■■■□□ 2.13
CDKN3-207ENST00000543789 FAM43AQ8N2R8 423 aa28.36■■■□□ 2.13
CDKN3-207ENST00000543789 MAST3O60307 1309 aa28.36■■■□□ 2.13
CDKN3-207ENST00000543789 KIF16BQ96L93 1317 aa28.36■■■□□ 2.13
CDKN3-207ENST00000543789 WDHD1O75717 1129 aaPredicted RBP28.35■■■□□ 2.13
CDKN3-207ENST00000543789 FGFR2P21802 821 aa28.35■■■□□ 2.13
CDKN3-207ENST00000543789 HHIPL2Q6UWX4 724 aa28.35■■■□□ 2.13
CDKN3-207ENST00000543789 ERO1BQ86YB8 467 aa28.35■■■□□ 2.13
CDKN3-207ENST00000543789 SSH1Q8WYL5 1049 aa28.35■■■□□ 2.13
CDKN3-207ENST00000543789 GCC1Q96CN9 775 aa28.34■■■□□ 2.13
CDKN3-207ENST00000543789 WRNIP1Q96S55 665 aa28.34■■■□□ 2.13
CDKN3-207ENST00000543789 HTTP42858 3142 aa28.34■■■□□ 2.13
CDKN3-207ENST00000543789 E9PSI1 815 aa28.33■■■□□ 2.13
CDKN3-207ENST00000543789 CETPP11597 493 aa28.33■■■□□ 2.13
CDKN3-207ENST00000543789 ZKSCAN4Q969J2 545 aaPredicted RBP28.33■■■□□ 2.13
CDKN3-207ENST00000543789 SNCAIPQ9Y6H5 919 aa28.33■■■□□ 2.13
CDKN3-207ENST00000543789 EYA2O00167 538 aa28.32■■■□□ 2.12
CDKN3-207ENST00000543789 EN2P19622 333 aaPredicted RBP28.32■■■□□ 2.12
CDKN3-207ENST00000543789 NBPF11Q86T75 865 aa28.32■■■□□ 2.12
CDKN3-207ENST00000543789 LPIN2Q92539 896 aa28.32■■■□□ 2.12
CDKN3-207ENST00000543789 TMEM106CQ9BVX2 250 aa28.32■■■□□ 2.12
CDKN3-207ENST00000543789 SLC5A1P13866 664 aa28.31■■■□□ 2.12
CDKN3-207ENST00000543789 SNAPC2Q13487 334 aa28.31■■■□□ 2.12
CDKN3-207ENST00000543789 DCAF15Q66K64 600 aa28.31■■■□□ 2.12
CDKN3-207ENST00000543789 WDR66Q8TBY9 1149 aa28.31■■■□□ 2.12
CDKN3-207ENST00000543789 ZCCHC17Q9NP64 241 aaKnown RBP28.31■■■□□ 2.12
CDKN3-207ENST00000543789 IRF6O14896 467 aa28.3■■■□□ 2.12
CDKN3-207ENST00000543789 RFX5P48382 616 aaPredicted RBP28.3■■■□□ 2.12
CDKN3-207ENST00000543789 ZNF333Q96JL9 665 aa28.3■■■□□ 2.12
CDKN3-207ENST00000543789 LAMB1P07942 1786 aa28.29■■■□□ 2.12
CDKN3-207ENST00000543789 BTBD19C9JJ37 291 aa28.29■■■□□ 2.12
CDKN3-207ENST00000543789 TLR2O60603 784 aa28.29■■■□□ 2.12
CDKN3-207ENST00000543789 PPIL2Q13356 520 aa28.29■■■□□ 2.12
CDKN3-207ENST00000543789 SLC9C1Q4G0N8 1177 aa28.29■■■□□ 2.12
CDKN3-207ENST00000543789 MIGA2Q7L4E1 593 aa28.29■■■□□ 2.12
CDKN3-207ENST00000543789 PTCH2Q9Y6C5 1203 aa28.29■■■□□ 2.12
CDKN3-207ENST00000543789 ZNF341Q9BYN7 854 aa28.28■■■□□ 2.12
CDKN3-207ENST00000543789 KIF22Q14807 665 aa28.27■■■□□ 2.12
CDKN3-207ENST00000543789 FAM151AQ8WW52 585 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms