RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 CXCL9Q07325 125 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 DACT2Q5SW24 774 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 SLC9C2Q5TAH2 1124 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 NAA16Q6N069 864 aaPredicted RBP14.35□□□□□ -0.11
DDB1-223ENST00000543658 RSBN1LQ6PCB5 846 aaPredicted RBP14.35□□□□□ -0.11
DDB1-223ENST00000543658 TMED8Q6PL24 325 aaPredicted RBP14.35□□□□□ -0.11
DDB1-223ENST00000543658 PPP4R3CPQ6ZMV5 832 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 MAGEB6Q8N7X4 407 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 KCNQ5Q9NR82 932 aa14.35□□□□□ -0.11
DDB1-223ENST00000543658 ZC3H4Q9UPT8 1303 aaKnown RBP14.35□□□□□ -0.11
DDB1-223ENST00000543658 ADAMTSL1Q8N6G6 1762 aa14.34□□□□□ -0.11
DDB1-223ENST00000543658 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
DDB1-223ENST00000543658 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
DDB1-223ENST00000543658 LDHCP07864 332 aa14.34□□□□□ -0.11
DDB1-223ENST00000543658 VIL1P09327 827 aaKnown RBP14.34□□□□□ -0.11
DDB1-223ENST00000543658 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
DDB1-223ENST00000543658 TTF2Q9UNY4 1162 aaKnown RBP14.34□□□□□ -0.11
DDB1-223ENST00000543658 PDE6AP16499 860 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 RPS12P25398 132 aaKnown RBP14.33□□□□□ -0.12
DDB1-223ENST00000543658 ADD2P35612 726 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 DPY19L2Q6NUT2 758 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 KIAA0825Q8IV33 1275 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 OGFOD1Q8N543 542 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 MXD3Q9BW11 206 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 ZNF541Q9H0D2 1346 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 ZNF532Q9HCE3 1301 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 CDK5RAP2Q96SN8 1893 aa14.33□□□□□ -0.12
DDB1-223ENST00000543658 CYP7A1P22680 504 aa14.32□□□□□ -0.12
DDB1-223ENST00000543658 RBM5P52756 815 aaKnown RBP eCLIP14.32□□□□□ -0.12
DDB1-223ENST00000543658 MFAP1P55081 439 aaKnown RBP14.32□□□□□ -0.12
DDB1-223ENST00000543658 MECOMQ03112 1051 aa14.32□□□□□ -0.12
DDB1-223ENST00000543658 UBE3CQ15386 1083 aa14.32□□□□□ -0.12
DDB1-223ENST00000543658 CWC27Q6UX04 472 aaKnown RBP14.32□□□□□ -0.12
DDB1-223ENST00000543658 GPC2Q8N158 579 aa14.32□□□□□ -0.12
DDB1-223ENST00000543658 CERS5Q8N5B7 392 aa14.32□□□□□ -0.12
DDB1-223ENST00000543658 APPBP2Q92624 585 aa14.32□□□□□ -0.12
DDB1-223ENST00000543658 NSUN4Q96CB9 384 aaKnown RBP14.32□□□□□ -0.12
DDB1-223ENST00000543658 RAD50Q92878 1312 aa14.32□□□□□ -0.12
DDB1-223ENST00000543658 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 NAV1Q8NEY1 1877 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 GOLGB1Q14789 3259 aaKnown RBP14.31□□□□□ -0.12
DDB1-223ENST00000543658 CHMLP26374 656 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
DDB1-223ENST00000543658 SCNN1DP51172 638 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
DDB1-223ENST00000543658 TEKT1Q969V4 418 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 HELLSQ9NRZ9 838 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
DDB1-223ENST00000543658 MROH7-TTC4A0A0A0MT08 1334 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 SCN4AP35499 1836 aa14.31□□□□□ -0.12
DDB1-223ENST00000543658 BAG3O95817 575 aa14.3□□□□□ -0.12
DDB1-223ENST00000543658 KCNA4P22459 653 aa14.3□□□□□ -0.12
DDB1-223ENST00000543658 MMP14P50281 582 aa14.3□□□□□ -0.12
DDB1-223ENST00000543658 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
DDB1-223ENST00000543658 CERS3Q8IU89 383 aa14.3□□□□□ -0.12
DDB1-223ENST00000543658 MYH1P12882 1939 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 USP17L8P0C7I0 530 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 PLCG2P16885 1265 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 CRKP46108 304 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 GMPSP49915 693 aaPredicted RBP14.29□□□□□ -0.12
DDB1-223ENST00000543658 HDLBPQ00341 1268 aaKnown RBP14.29□□□□□ -0.12
DDB1-223ENST00000543658 DIXDC1Q155Q3 683 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 GRIK5Q16478 980 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 ZMYM1Q5SVZ6 1142 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 SERPINA10Q9UK55 444 aa14.29□□□□□ -0.12
DDB1-223ENST00000543658 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 A0A0D9SFI3 127 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 H7C1D1 291 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 LAMB1P07942 1786 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 BTDP43251 543 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 HHIPL2Q6UWX4 724 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 MIGA1Q8NAN2 632 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 DPF2Q92785 391 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 ESYT1Q9BSJ8 1104 aa14.28□□□□□ -0.12
DDB1-223ENST00000543658 AATFQ9NY61 560 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDB1-223ENST00000543658 BAZ2AQ9UIF9 1905 aaKnown RBP14.28□□□□□ -0.12
DDB1-223ENST00000543658 WDR90Q96KV7 1748 aa14.27□□□□□ -0.12
DDB1-223ENST00000543658 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.12
DDB1-223ENST00000543658 TCRBV5S4A2TA0A5A2 114 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 MYO1BO43795 1136 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
DDB1-223ENST00000543658 REC8O95072 547 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 MBD4O95243 580 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 DLGAP5Q15398 846 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 CFAP100Q494V2 611 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 MICALL2Q8IY33 904 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 GMLQ99445 158 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 MRIQ9BWK5 157 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 DAGLAQ9Y4D2 1042 aa14.27□□□□□ -0.13
DDB1-223ENST00000543658 GAKO14976 1311 aa14.26□□□□□ -0.13
DDB1-223ENST00000543658 GLTPD2A6NH11 291 aa14.26□□□□□ -0.13
DDB1-223ENST00000543658 M0R2C6 588 aa14.26□□□□□ -0.13
DDB1-223ENST00000543658 GPAA1O43292 621 aa14.26□□□□□ -0.13
DDB1-223ENST00000543658 GNAT2P19087 354 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms