RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
SPPL3-207ENST00000543608 SREBF2Q12772 1141 aa20.37■□□□□ 0.85
SPPL3-207ENST00000543608 SUPT20HL1Q3ZLR7 823 aa20.37■□□□□ 0.85
SPPL3-207ENST00000543608 API5Q9BZZ5 524 aaKnown RBP20.37■□□□□ 0.85
SPPL3-207ENST00000543608 LRRFIP2Q9Y608 721 aaKnown RBP20.37■□□□□ 0.85
SPPL3-207ENST00000543608 USP2O75604 605 aaPredicted RBP20.36■□□□□ 0.85
SPPL3-207ENST00000543608 CACNB3P54284 484 aa20.36■□□□□ 0.85
SPPL3-207ENST00000543608 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
SPPL3-207ENST00000543608 ZNF296Q8WUU4 475 aaPredicted RBP20.36■□□□□ 0.85
SPPL3-207ENST00000543608 SLC10A4Q96EP9 437 aa20.36■□□□□ 0.85
SPPL3-207ENST00000543608 WNK4Q96J92 1243 aa20.36■□□□□ 0.85
SPPL3-207ENST00000543608 MEIS3Q99687 375 aa20.36■□□□□ 0.85
SPPL3-207ENST00000543608 TMEM39BQ9GZU3 492 aa20.36■□□□□ 0.85
SPPL3-207ENST00000543608 R3HDMLQ9H3Y0 253 aa20.36■□□□□ 0.85
SPPL3-207ENST00000543608 KIF16BQ96L93 1317 aa20.35■□□□□ 0.85
SPPL3-207ENST00000543608 SLC5A1P13866 664 aa20.35■□□□□ 0.85
SPPL3-207ENST00000543608 TNFAIP1Q13829 316 aa20.35■□□□□ 0.85
SPPL3-207ENST00000543608 CTU1Q7Z7A3 348 aaKnown RBP20.35■□□□□ 0.85
SPPL3-207ENST00000543608 TEPSINQ96N21 525 aa20.35■□□□□ 0.85
SPPL3-207ENST00000543608 PA2G4Q9UQ80 394 aaKnown RBP20.35■□□□□ 0.85
SPPL3-207ENST00000543608 GJA5P36382 358 aa20.34■□□□□ 0.85
SPPL3-207ENST00000543608 IREB2P48200 963 aaKnown RBP20.34■□□□□ 0.85
SPPL3-207ENST00000543608 LPIN2Q92539 896 aa20.34■□□□□ 0.85
SPPL3-207ENST00000543608 TEKT1Q969V4 418 aa20.34■□□□□ 0.85
SPPL3-207ENST00000543608 TNNQ9UQP3 1299 aa20.33■□□□□ 0.85
SPPL3-207ENST00000543608 MANSC4A6NHS7 340 aaPredicted RBP20.32■□□□□ 0.84
SPPL3-207ENST00000543608 GPR25O00155 361 aa20.32■□□□□ 0.84
SPPL3-207ENST00000543608 ZBTB48P10074 688 aaPredicted RBP20.32■□□□□ 0.84
SPPL3-207ENST00000543608 ATP2B3Q16720 1220 aa20.32■□□□□ 0.84
SPPL3-207ENST00000543608 ELP3Q9H9T3 547 aa20.32■□□□□ 0.84
SPPL3-207ENST00000543608 IGF2BP3O00425 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
SPPL3-207ENST00000543608 CIAO1O76071 339 aa20.31■□□□□ 0.84
SPPL3-207ENST00000543608 TNNI2P48788 182 aa20.31■□□□□ 0.84
SPPL3-207ENST00000543608 HDLBPQ00341 1268 aaKnown RBP20.31■□□□□ 0.84
SPPL3-207ENST00000543608 ANKRD13AQ8IZ07 590 aa20.31■□□□□ 0.84
SPPL3-207ENST00000543608 APOBEC3HQ6NTF7 200 aaKnown RBP20.3■□□□□ 0.84
SPPL3-207ENST00000543608 IFNL1Q8IU54 200 aa20.3■□□□□ 0.84
SPPL3-207ENST00000543608 CNKSR2Q8WXI2 1034 aa20.3■□□□□ 0.84
SPPL3-207ENST00000543608 ZDHHC15Q96MV8 337 aa20.3■□□□□ 0.84
SPPL3-207ENST00000543608 CEP126Q9P2H0 1117 aa20.3■□□□□ 0.84
SPPL3-207ENST00000543608 MAST3O60307 1309 aa20.29■□□□□ 0.84
SPPL3-207ENST00000543608 ADORA1P30542 326 aa20.29■□□□□ 0.84
SPPL3-207ENST00000543608 RGS19P49795 217 aa20.29■□□□□ 0.84
SPPL3-207ENST00000543608 SOX10P56693 466 aa20.29■□□□□ 0.84
SPPL3-207ENST00000543608 MLLT1Q03111 559 aaPredicted RBP20.29■□□□□ 0.84
SPPL3-207ENST00000543608 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
SPPL3-207ENST00000543608 OPTNQ96CV9 577 aa20.29■□□□□ 0.84
SPPL3-207ENST00000543608 CFHR5Q9BXR6 569 aa20.29■□□□□ 0.84
SPPL3-207ENST00000543608 UNCXA6NJT0 531 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 BCAR3O75815 825 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 IL15P40933 162 aaPredicted RBP20.28■□□□□ 0.84
SPPL3-207ENST00000543608 PHKA1P46020 1223 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 VGLL4Q14135 290 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.28■□□□□ 0.84
SPPL3-207ENST00000543608 WDR66Q8TBY9 1149 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 COPRSQ9NQ92 184 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 FBXO3Q9UK99 471 aa20.28■□□□□ 0.84
SPPL3-207ENST00000543608 FKTNO75072 461 aa20.27■□□□□ 0.84
SPPL3-207ENST00000543608 TRIM27P14373 513 aa20.27■□□□□ 0.84
SPPL3-207ENST00000543608 PRDX5P30044 214 aa20.27■□□□□ 0.84
SPPL3-207ENST00000543608 ARHGAP45Q92619 1136 aa20.27■□□□□ 0.84
SPPL3-207ENST00000543608 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
SPPL3-207ENST00000543608 TMOD2Q9NZR1 351 aa20.27■□□□□ 0.84
SPPL3-207ENST00000543608 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.84
SPPL3-207ENST00000543608 SUGT1Q9Y2Z0 365 aa20.27■□□□□ 0.84
SPPL3-207ENST00000543608 ALDH1A1P00352 501 aa20.26■□□□□ 0.83
SPPL3-207ENST00000543608 INHBEP58166 350 aa20.26■□□□□ 0.83
SPPL3-207ENST00000543608 NOM1Q5C9Z4 860 aaKnown RBP20.26■□□□□ 0.83
SPPL3-207ENST00000543608 HHIPL2Q6UWX4 724 aa20.26■□□□□ 0.83
SPPL3-207ENST00000543608 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.26■□□□□ 0.83
SPPL3-207ENST00000543608 PTPN18Q99952 460 aa20.26■□□□□ 0.83
SPPL3-207ENST00000543608 DAGLAQ9Y4D2 1042 aa20.26■□□□□ 0.83
SPPL3-207ENST00000543608 SRGAP3O43295 1099 aa20.25■□□□□ 0.83
SPPL3-207ENST00000543608 CLUAP1Q96AJ1 413 aa20.25■□□□□ 0.83
SPPL3-207ENST00000543608 MRIQ9BWK5 157 aa20.25■□□□□ 0.83
SPPL3-207ENST00000543608 HDAC5Q9UQL6 1122 aa20.25■□□□□ 0.83
SPPL3-207ENST00000543608 MYH2Q9UKX2 1941 aa20.24■□□□□ 0.83
SPPL3-207ENST00000543608 GNAI3P08754 354 aa20.24■□□□□ 0.83
SPPL3-207ENST00000543608 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
SPPL3-207ENST00000543608 CRHR2Q13324 411 aa20.24■□□□□ 0.83
SPPL3-207ENST00000543608 FAM83AQ86UY5 434 aa20.24■□□□□ 0.83
SPPL3-207ENST00000543608 MIER1Q8N108 512 aa20.24■□□□□ 0.83
SPPL3-207ENST00000543608 OTUD5Q96G74 571 aa20.24■□□□□ 0.83
SPPL3-207ENST00000543608 GNL3LQ9NVN8 582 aaKnown RBP20.24■□□□□ 0.83
SPPL3-207ENST00000543608 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.24■□□□□ 0.83
SPPL3-207ENST00000543608 AK9Q5TCS8 1911 aa20.23■□□□□ 0.83
SPPL3-207ENST00000543608 RPAP1Q9BWH6 1393 aaPredicted RBP20.23■□□□□ 0.83
SPPL3-207ENST00000543608 CCDC102BQ68D86 513 aa20.23■□□□□ 0.83
SPPL3-207ENST00000543608 ATF7IPQ6VMQ6 1270 aa20.23■□□□□ 0.83
SPPL3-207ENST00000543608 WRNIP1Q96S55 665 aa20.23■□□□□ 0.83
SPPL3-207ENST00000543608 CSADQ9Y600 493 aa20.23■□□□□ 0.83
SPPL3-207ENST00000543608 TESPA1A2RU30 521 aaPredicted RBP20.22■□□□□ 0.83
SPPL3-207ENST00000543608 TNRC18O15417 2968 aaPredicted RBP20.22■□□□□ 0.83
SPPL3-207ENST00000543608 LDHBP07195 334 aaKnown RBP20.22■□□□□ 0.83
SPPL3-207ENST00000543608 TIMM10P62072 90 aa20.22■□□□□ 0.83
SPPL3-207ENST00000543608 HNRNPUQ00839 825 aaKnown RBP eCLIP20.22■□□□□ 0.83
SPPL3-207ENST00000543608 TFCP2Q12800 502 aa20.22■□□□□ 0.83
SPPL3-207ENST00000543608 NFIAQ12857 509 aa20.22■□□□□ 0.83
SPPL3-207ENST00000543608 MTX1Q13505 466 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms