RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 CTCFLQ8NI51 663 aaPredicted RBP9.38□□□□□ -0.91
TRIM59-208ENST00000543469 PODXL2Q9NZ53 605 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 PDE6AP16499 860 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 VPS53Q5VIR6 699 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
TRIM59-208ENST00000543469 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
TRIM59-208ENST00000543469 WDR33Q9C0J8 1336 aaKnown RBP9.37□□□□□ -0.91
TRIM59-208ENST00000543469 RRP12Q5JTH9 1297 aaKnown RBP9.37□□□□□ -0.91
TRIM59-208ENST00000543469 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 ZNF396Q96N95 335 aaPredicted RBP9.37□□□□□ -0.91
TRIM59-208ENST00000543469 USP26Q9BXU7 913 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 AFDNP55196 1824 aaKnown RBP9.37□□□□□ -0.91
TRIM59-208ENST00000543469 MBD4O95243 580 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
TRIM59-208ENST00000543469 SWAP70Q9UH65 585 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 DUOX1Q9NRD9 1551 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 MINDY4BA8MYZ0 360 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 GPAA1O43292 621 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 RPS12P25398 132 aaKnown RBP9.37□□□□□ -0.91
TRIM59-208ENST00000543469 ADD2P35612 726 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 PI4K2BQ8TCG2 481 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 ZNF532Q9HCE3 1301 aa9.37□□□□□ -0.91
TRIM59-208ENST00000543469 DLGAP5Q15398 846 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 TTLL5Q6EMB2 1281 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 RBM28Q9NW13 759 aaKnown RBP9.36□□□□□ -0.91
TRIM59-208ENST00000543469 PHKA1P46020 1223 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 CREB3L3Q68CJ9 461 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 DHX36Q9H2U1 1008 aaKnown RBP9.36□□□□□ -0.91
TRIM59-208ENST00000543469 SLC12A7Q9Y666 1083 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 PNPLA7Q6ZV29 1317 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 CELF1Q92879 486 aaKnown RBP9.36□□□□□ -0.91
TRIM59-208ENST00000543469 LZTS2Q9BRK4 669 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 EHMT1Q9H9B1 1298 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 ARFGEF2Q9Y6D5 1785 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 BTAF1O14981 1849 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 BCAMP50895 628 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 ALX1Q15699 326 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 DCAF15Q66K64 600 aa9.36□□□□□ -0.91
TRIM59-208ENST00000543469 DHX32Q7L7V1 743 aaKnown RBP9.36□□□□□ -0.91
TRIM59-208ENST00000543469 IFIT3O14879 490 aaKnown RBP9.35□□□□□ -0.91
TRIM59-208ENST00000543469 ZBTB22O15209 634 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 FBXO33Q7Z6M2 555 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 KAT14Q9H8E8 782 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 WDR19Q8NEZ3 1342 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 SALL1Q9NSC2 1324 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 TSPY2A6NKD2 308 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 SRGNP10124 158 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 HSPA4P34932 840 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 GYG1P46976 350 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 JMYQ8N9B5 988 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 LRRC4BQ9NT99 713 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 HOOK1Q9UJC3 728 aaKnown RBP9.35□□□□□ -0.91
TRIM59-208ENST00000543469 NOL7Q9UMY1 257 aaKnown RBP9.35□□□□□ -0.91
TRIM59-208ENST00000543469 GTF2IP78347 998 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 WTAPQ15007 396 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 CCDC17Q96LX7 622 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 CD209Q9NNX6 404 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 GSPT1P15170 499 aaKnown RBP9.35□□□□□ -0.91
TRIM59-208ENST00000543469 CRY2Q49AN0 593 aa9.35□□□□□ -0.91
TRIM59-208ENST00000543469 INTS4Q96HW7 963 aaKnown RBP9.35□□□□□ -0.91
TRIM59-208ENST00000543469 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
TRIM59-208ENST00000543469 GPSM2P81274 684 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 TMEM67Q5HYA8 995 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 TBC1D16Q8TBP0 767 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 GLT8D2Q9H1C3 349 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 TTF2Q9UNY4 1162 aaKnown RBP9.34□□□□□ -0.91
TRIM59-208ENST00000543469 ZMYM6O95789 1325 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 TSPY3P0CV98 308 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 TSPY8P0CW00 308 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 SYNE4Q8N205 404 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 OTUD7AQ8TE49 926 aaPredicted RBP9.34□□□□□ -0.91
TRIM59-208ENST00000543469 LLPHQ9BRT6 129 aaKnown RBP9.34□□□□□ -0.91
TRIM59-208ENST00000543469 MCM9Q9NXL9 1143 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 SEC63Q9UGP8 760 aaKnown RBP9.34□□□□□ -0.91
TRIM59-208ENST00000543469 RANBP6O60518 1105 aaKnown RBP9.34□□□□□ -0.91
TRIM59-208ENST00000543469 ADORA1P30542 326 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 SF3A1Q15459 793 aaKnown RBP9.34□□□□□ -0.91
TRIM59-208ENST00000543469 TSHZ3Q63HK5 1081 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
TRIM59-208ENST00000543469 TCEAL9Q9UHQ7 104 aa9.34□□□□□ -0.91
TRIM59-208ENST00000543469 FGFR2P21802 821 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 R3HDM1Q15032 1099 aaKnown RBP9.33□□□□□ -0.92
TRIM59-208ENST00000543469 RUFY3Q7L099 469 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 KAZALD1Q96I82 304 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 PSMD1Q99460 953 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 RASGRF1Q13972 1273 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 MCTP2Q6DN12 878 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 GINM1Q9NU53 330 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 GOLGA8AA7E2F4 631 aa9.33□□□□□ -0.92
TRIM59-208ENST00000543469 GOLGA8BA8MQT2 603 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms