RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 ZNF70Q9UC06 446 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 PPP2R3BQ9Y5P8 575 aa16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-215ENST00000543359 MYO1BO43795 1136 aa16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 GNAI2P04899 355 aa16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 NF2P35240 595 aa16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 RASA3Q14644 834 aa16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 NBPF12Q5TAG4 269 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TEPSINQ96N21 525 aa16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TDRD3Q9H7E2 651 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 VEZTQ9HBM0 779 aa16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 SUGT1Q9Y2Z0 365 aa16.32■□□□□ 0.2
TNFRSF1A-215ENST00000543359 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 PNMA6EA0A0J9YXQ4 647 aa16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 FRAT2O75474 233 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 RLBP1P12271 317 aa16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 ADORA1P30542 326 aa16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
TNFRSF1A-215ENST00000543359 AKAP11Q9UKA4 1901 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 PHKA1P46020 1223 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TIMM10P62072 90 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 PRKG1Q13976 671 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 ZDHHC15Q96MV8 337 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-215ENST00000543359 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TFCP2Q12800 502 aa16.29■□□□□ 0.2
TNFRSF1A-215ENST00000543359 SUPT20HL1Q3ZLR7 823 aa16.29■□□□□ 0.2
TNFRSF1A-215ENST00000543359 HHIPL2Q6UWX4 724 aa16.29■□□□□ 0.2
TNFRSF1A-215ENST00000543359 REM2Q8IYK8 340 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TEKT1Q969V4 418 aa16.29■□□□□ 0.2
TNFRSF1A-215ENST00000543359 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TM4SF4P48230 202 aa16.28■□□□□ 0.2
TNFRSF1A-215ENST00000543359 POLA2Q14181 598 aa16.28■□□□□ 0.2
TNFRSF1A-215ENST00000543359 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
TNFRSF1A-215ENST00000543359 SALL1Q9NSC2 1324 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 UNCXA6NJT0 531 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 SEMA3EO15041 775 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TRPA1O75762 1119 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TNFAIP1Q13829 316 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 SPRYD7Q5W111 196 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 CLMNQ96JQ2 1002 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 TMEM39BQ9GZU3 492 aa16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 GNL3LQ9NVN8 582 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-215ENST00000543359 A0A1B0GUL7 405 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 PPP1R12BO60237 982 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 PRDX5P30044 214 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 CACNB3P54284 484 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 FKBP1CQ5VVH2 108 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 SSH3Q8TE77 659 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 DENND2AQ9ULE3 1009 aa16.26■□□□□ 0.19
TNFRSF1A-215ENST00000543359 MAST3O60307 1309 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 PDS5AQ29RF7 1337 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 CAPN15O75808 1086 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 RASGRF1Q13972 1273 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 SLC10A4Q96EP9 437 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 DAGLAQ9Y4D2 1042 aa16.25■□□□□ 0.19
TNFRSF1A-215ENST00000543359 LAMB1P07942 1786 aa16.24■□□□□ 0.19
TNFRSF1A-215ENST00000543359 GJA5P36382 358 aa16.24■□□□□ 0.19
TNFRSF1A-215ENST00000543359 MKRN3Q13064 507 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-215ENST00000543359 FAM83AQ86UY5 434 aa16.24■□□□□ 0.19
TNFRSF1A-215ENST00000543359 C1orf115Q9H7X2 142 aa16.24■□□□□ 0.19
TNFRSF1A-215ENST00000543359 OTOFQ9HC10 1997 aa16.24■□□□□ 0.19
TNFRSF1A-215ENST00000543359 IREB2P48200 963 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-215ENST00000543359 TNNI2P48788 182 aa16.23■□□□□ 0.19
TNFRSF1A-215ENST00000543359 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-215ENST00000543359 FTSJ3Q8IY81 847 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-215ENST00000543359 PANK1Q8TE04 598 aa16.23■□□□□ 0.19
TNFRSF1A-215ENST00000543359 ABHD8Q96I13 439 aa16.23■□□□□ 0.19
TNFRSF1A-215ENST00000543359 WNK4Q96J92 1243 aa16.23■□□□□ 0.19
TNFRSF1A-215ENST00000543359 LDHBP07195 334 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-215ENST00000543359 ZBTB48P10074 688 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-215ENST00000543359 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
TNFRSF1A-215ENST00000543359 CDC42EP5Q6NZY7 148 aa16.22■□□□□ 0.19
TNFRSF1A-215ENST00000543359 ITPRIPQ8IWB1 547 aa16.22■□□□□ 0.19
TNFRSF1A-215ENST00000543359 ANKRD13AQ8IZ07 590 aa16.22■□□□□ 0.19
TNFRSF1A-215ENST00000543359 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-215ENST00000543359 HTTP42858 3142 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 NFIAQ12857 509 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 ZNF384Q8TF68 577 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 NEUROD6Q96NK8 337 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 MCOLN1Q9GZU1 580 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 R3HDMLQ9H3Y0 253 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
TNFRSF1A-215ENST00000543359 GAKO14976 1311 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms