RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 FAM160A1Q05DH4 1040 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 CCDC82Q8N4S0 544 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 AFMP43652 599 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 CCDC25Q86WR0 208 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 ARHGEF2Q92974 986 aaKnown RBP21.7■■□□□ 1.06
HDAC4-215ENST00000543185 NCAPGQ9BPX3 1015 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 C6orf50Q9HD87 102 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 HSP90AA5PQ58FG0 334 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 ZNF830Q96NB3 372 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-215ENST00000543185 TEX13AQ9BXU3 409 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-215ENST00000543185 ANKRD36BQ8N2N9 1353 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 KLHL34Q8N239 644 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
HDAC4-215ENST00000543185 ERCC5P28715 1186 aaPredicted RBP21.69■■□□□ 1.06
HDAC4-215ENST00000543185 GNA11P29992 359 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 KRT2P35908 639 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 PPP1R9BQ96SB3 815 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 TACC3Q9Y6A5 838 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 CCDC61Q9Y6R9 512 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 UQCRFS1P1P0C7P4 283 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 HSPA1LP34931 641 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 BRD3Q15059 726 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 B4DLN1 442 aa21.69■■□□□ 1.06
HDAC4-215ENST00000543185 MRPL12P52815 198 aaKnown RBP21.69■■□□□ 1.06
HDAC4-215ENST00000543185 HAUS8Q9BT25 410 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 IFNKQ9P0W0 207 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 SYT10Q6XYQ8 523 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 NUCKS1Q9H1E3 243 aaKnown RBP21.68■■□□□ 1.06
HDAC4-215ENST00000543185 MUM1Q2TAK8 710 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 CFAP221Q4G0U5 840 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 TMEM87AQ8NBN3 555 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 KIF1BO60333 1816 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 EVI5O60447 810 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 NCBP1Q09161 790 aaKnown RBP21.68■■□□□ 1.06
HDAC4-215ENST00000543185 MCMDC2Q4G0Z9 681 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 CABS1Q96KC9 395 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 RAB17Q9H0T7 212 aa21.68■■□□□ 1.06
HDAC4-215ENST00000543185 ARHGAP6O43182 974 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 PPM1FP49593 454 aaPredicted RBP21.67■■□□□ 1.06
HDAC4-215ENST00000543185 PRR16Q569H4 304 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 PSMD1Q99460 953 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 NAP1L4Q99733 375 aaKnown RBP21.67■■□□□ 1.06
HDAC4-215ENST00000543185 ESYT1Q9BSJ8 1104 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 GIPC1O14908 333 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 DNM1Q05193 864 aaKnown RBP21.67■■□□□ 1.06
HDAC4-215ENST00000543185 CNNM4Q6P4Q7 775 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 ITIH3Q06033 890 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 C20orf194Q5TEA3 1177 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 MIER3Q7Z3K6 550 aa21.67■■□□□ 1.06
HDAC4-215ENST00000543185 MYO10Q9HD67 2058 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 ISM2Q6H9L7 571 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 MMRN2Q9H8L6 949 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 FCHSD1Q86WN1 690 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 PANK2Q9BZ23 570 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 HIP1RO75146 1068 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 RRS1Q15050 365 aaKnown RBP21.66■■□□□ 1.06
HDAC4-215ENST00000543185 TTC36A6NLP5 189 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 SDSP20132 328 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 MYH10P35580 1976 aa21.66■■□□□ 1.06
HDAC4-215ENST00000543185 KLF18A0A0U1RQI7 1052 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 P3H4Q92791 437 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 TSPY3P0CV98 308 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 TSPY8P0CW00 308 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 GCKP35557 465 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 SYNRGQ9UMZ2 1314 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 SATB1Q01826 763 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 LLPHQ9BRT6 129 aaKnown RBP21.65■■□□□ 1.06
HDAC4-215ENST00000543185 SPATS2LQ9NUQ6 558 aaKnown RBP21.65■■□□□ 1.06
HDAC4-215ENST00000543185 ZNF131P52739 623 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 TMTC1Q8IUR5 882 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 TRIM35Q9UPQ4 493 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
HDAC4-215ENST00000543185 FAM13AO94988 1023 aa21.64■■□□□ 1.06
HDAC4-215ENST00000543185 RLBP1P12271 317 aa21.64■■□□□ 1.06
HDAC4-215ENST00000543185 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.06
HDAC4-215ENST00000543185 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.06
HDAC4-215ENST00000543185 GEN1Q17RS7 908 aa21.64■■□□□ 1.06
HDAC4-215ENST00000543185 EPB41P11171 864 aaKnown RBP21.64■■□□□ 1.05
HDAC4-215ENST00000543185 TRIM4Q9C037 500 aa21.64■■□□□ 1.05
HDAC4-215ENST00000543185 SPDYE3A6NKU9 549 aa21.64■■□□□ 1.05
HDAC4-215ENST00000543185 GOLGA5Q8TBA6 731 aa21.64■■□□□ 1.05
HDAC4-215ENST00000543185 VSIG1Q86XK7 387 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 MCM10Q7L590 875 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 TXNDC2Q86VQ3 553 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 DDX27Q96GQ7 796 aaKnown RBP21.63■■□□□ 1.05
HDAC4-215ENST00000543185 PLCD1P51178 756 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 GOLGA8QA0A0J9YX86 632 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 GOLGA8OA6NCC3 632 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 GOLGA8NF8WBI6 632 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 E7EVH7 732 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 IGSF22Q8N9C0 903 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 SMARCC2Q8TAQ2 1214 aa21.63■■□□□ 1.05
HDAC4-215ENST00000543185 DDX54Q8TDD1 881 aaKnown RBP21.62■■□□□ 1.05
HDAC4-215ENST00000543185 ZSCAN26Q16670 478 aa21.62■■□□□ 1.05
HDAC4-215ENST00000543185 NBPF6Q5VWK0 638 aa21.62■■□□□ 1.05
HDAC4-215ENST00000543185 NBPF4Q96M43 638 aa21.62■■□□□ 1.05
HDAC4-215ENST00000543185 SMIM23A6NLE4 172 aa21.62■■□□□ 1.05
HDAC4-215ENST00000543185 SH3BP5O60239 455 aa21.62■■□□□ 1.05
HDAC4-215ENST00000543185 ARID5AQ03989 594 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms