RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 HMG20BQ9P0W2 317 aa22.55■■□□□ 1.2
COPS7A-216ENST00000543170 MAST2Q6P0Q8 1798 aa22.54■■□□□ 1.2
COPS7A-216ENST00000543170 APBB1O00213 710 aa22.54■■□□□ 1.2
COPS7A-216ENST00000543170 CRKP46108 304 aa22.54■■□□□ 1.2
COPS7A-216ENST00000543170 KRT26Q7Z3Y9 468 aa22.54■■□□□ 1.2
COPS7A-216ENST00000543170 EXOC6Q8TAG9 804 aa22.54■■□□□ 1.2
COPS7A-216ENST00000543170 ASTN2O75129 1339 aaPredicted RBP22.54■■□□□ 1.2
COPS7A-216ENST00000543170 LDHBP07195 334 aaKnown RBP22.53■■□□□ 1.2
COPS7A-216ENST00000543170 PRDX5P30044 214 aa22.53■■□□□ 1.2
COPS7A-216ENST00000543170 SULF1Q8IWU6 871 aa22.53■■□□□ 1.2
COPS7A-216ENST00000543170 TEKT1Q969V4 418 aa22.53■■□□□ 1.2
COPS7A-216ENST00000543170 GLIS2Q9BZE0 524 aaPredicted RBP22.53■■□□□ 1.2
COPS7A-216ENST00000543170 MYO1BO43795 1136 aa22.52■■□□□ 1.2
COPS7A-216ENST00000543170 IGSF3O75054 1194 aa22.52■■□□□ 1.2
COPS7A-216ENST00000543170 IFIT2P09913 472 aaKnown RBP22.52■■□□□ 1.2
COPS7A-216ENST00000543170 SPTY2D1Q68D10 685 aaPredicted RBP22.52■■□□□ 1.2
COPS7A-216ENST00000543170 HHIPL2Q6UWX4 724 aa22.52■■□□□ 1.2
COPS7A-216ENST00000543170 APOBEC3FQ8IUX4 373 aaKnown RBP22.52■■□□□ 1.2
COPS7A-216ENST00000543170 ZDHHC15Q96MV8 337 aa22.52■■□□□ 1.2
COPS7A-216ENST00000543170 RBM5P52756 815 aaKnown RBP eCLIP22.51■■□□□ 1.19
COPS7A-216ENST00000543170 PI16Q6UXB8 463 aa22.51■■□□□ 1.19
COPS7A-216ENST00000543170 PRMT6Q96LA8 375 aaPredicted RBP22.51■■□□□ 1.19
COPS7A-216ENST00000543170 CREBZFQ9NS37 354 aa22.51■■□□□ 1.19
COPS7A-216ENST00000543170 MYH2Q9UKX2 1941 aa22.51■■□□□ 1.19
COPS7A-216ENST00000543170 TRAF5O00463 557 aa22.5■■□□□ 1.19
COPS7A-216ENST00000543170 USP48Q86UV5 1035 aa22.5■■□□□ 1.19
COPS7A-216ENST00000543170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.5■■□□□ 1.19
COPS7A-216ENST00000543170 PCDHAC2Q9Y5I4 1007 aa22.5■■□□□ 1.19
COPS7A-216ENST00000543170 DOCK2Q92608 1830 aa22.5■■□□□ 1.19
COPS7A-216ENST00000543170 TMEM88BA6NKF7 163 aa22.49■■□□□ 1.19
COPS7A-216ENST00000543170 ADM5C9JUS6 153 aa22.49■■□□□ 1.19
COPS7A-216ENST00000543170 GCC1Q96CN9 775 aa22.49■■□□□ 1.19
COPS7A-216ENST00000543170 ABCF2Q9UG63 623 aa22.49■■□□□ 1.19
COPS7A-216ENST00000543170 SPDYE2Q495Y8 402 aa22.48■■□□□ 1.19
COPS7A-216ENST00000543170 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
COPS7A-216ENST00000543170 DZIP1Q86YF9 867 aaKnown RBP22.48■■□□□ 1.19
COPS7A-216ENST00000543170 SLF2Q8IX21 1173 aa22.48■■□□□ 1.19
COPS7A-216ENST00000543170 PPP2R3BQ9Y5P8 575 aa22.48■■□□□ 1.19
COPS7A-216ENST00000543170 GAKO14976 1311 aa22.47■■□□□ 1.19
COPS7A-216ENST00000543170 APOBEC3HQ6NTF7 200 aaKnown RBP22.46■■□□□ 1.19
COPS7A-216ENST00000543170 FAM163AQ96GL9 167 aaPredicted RBP22.46■■□□□ 1.19
COPS7A-216ENST00000543170 DAGLAQ9Y4D2 1042 aa22.46■■□□□ 1.19
COPS7A-216ENST00000543170 AOX1Q06278 1338 aa22.46■■□□□ 1.19
COPS7A-216ENST00000543170 MYO5AQ9Y4I1 1855 aaKnown RBP22.45■■□□□ 1.19
COPS7A-216ENST00000543170 SMARCA5O60264 1052 aaPredicted RBP22.45■■□□□ 1.18
COPS7A-216ENST00000543170 CELF2O95319 508 aaKnown RBP22.45■■□□□ 1.18
COPS7A-216ENST00000543170 CYP2E1P05181 493 aaPredicted RBP22.45■■□□□ 1.18
COPS7A-216ENST00000543170 ZAP70P43403 619 aa22.45■■□□□ 1.18
COPS7A-216ENST00000543170 FMR1Q06787 632 aaKnown RBP eCLIP22.45■■□□□ 1.18
COPS7A-216ENST00000543170 TNFAIP1Q13829 316 aa22.45■■□□□ 1.18
COPS7A-216ENST00000543170 DIXDC1Q155Q3 683 aa22.45■■□□□ 1.18
COPS7A-216ENST00000543170 CST9Q5W186 159 aa22.45■■□□□ 1.18
COPS7A-216ENST00000543170 CDCA5Q96FF9 252 aa22.45■■□□□ 1.18
COPS7A-216ENST00000543170 RWDD1Q9H446 243 aaPredicted RBP22.45■■□□□ 1.18
COPS7A-216ENST00000543170 SNRKQ9NRH2 765 aa22.45■■□□□ 1.18
COPS7A-216ENST00000543170 ZNF70Q9UC06 446 aaPredicted RBP22.45■■□□□ 1.18
COPS7A-216ENST00000543170 CLRN2A0PK11 232 aa22.44■■□□□ 1.18
COPS7A-216ENST00000543170 GSTO1P78417 241 aa22.44■■□□□ 1.18
COPS7A-216ENST00000543170 MECOMQ03112 1051 aa22.44■■□□□ 1.18
COPS7A-216ENST00000543170 TBC1D9Q6ZT07 1266 aa22.44■■□□□ 1.18
COPS7A-216ENST00000543170 NSUN4Q96CB9 384 aaKnown RBP22.44■■□□□ 1.18
COPS7A-216ENST00000543170 PAPPA2Q9BXP8 1791 aa22.44■■□□□ 1.18
COPS7A-216ENST00000543170 TDRD3Q9H7E2 651 aaKnown RBP22.44■■□□□ 1.18
COPS7A-216ENST00000543170 MROH7-TTC4A0A0A0MT08 1334 aa22.43■■□□□ 1.18
COPS7A-216ENST00000543170 ATP5JP18859 108 aa22.43■■□□□ 1.18
COPS7A-216ENST00000543170 FKBP1CQ5VVH2 108 aa22.43■■□□□ 1.18
COPS7A-216ENST00000543170 TMED8Q6PL24 325 aaPredicted RBP22.43■■□□□ 1.18
COPS7A-216ENST00000543170 VEZTQ9HBM0 779 aa22.43■■□□□ 1.18
COPS7A-216ENST00000543170 TMOD2Q9NZR1 351 aa22.43■■□□□ 1.18
COPS7A-216ENST00000543170 LRP2BPQ9P2M1 347 aa22.43■■□□□ 1.18
COPS7A-216ENST00000543170 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
COPS7A-216ENST00000543170 SMC5Q8IY18 1101 aa22.42■■□□□ 1.18
COPS7A-216ENST00000543170 ZNF384Q8TF68 577 aa22.42■■□□□ 1.18
COPS7A-216ENST00000543170 DEFB129Q9H1M3 183 aa22.42■■□□□ 1.18
COPS7A-216ENST00000543170 RAI14Q9P0K7 980 aa22.42■■□□□ 1.18
COPS7A-216ENST00000543170 RPAP1Q9BWH6 1393 aaPredicted RBP22.41■■□□□ 1.18
COPS7A-216ENST00000543170 TTF1Q15361 905 aaPredicted RBP22.41■■□□□ 1.18
COPS7A-216ENST00000543170 GPATCH3Q96I76 525 aa22.41■■□□□ 1.18
COPS7A-216ENST00000543170 ZNF408Q9H9D4 720 aa22.41■■□□□ 1.18
COPS7A-216ENST00000543170 TLL2Q9Y6L7 1015 aa22.41■■□□□ 1.18
COPS7A-216ENST00000543170 CEP350Q5VT06 3117 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 RFX7Q2KHR2 1363 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 LDHCP07864 332 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 TNNI2P48788 182 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 FKBP1BP68106 108 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 HTRA3P83110 453 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 DLK2Q6UY11 383 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
COPS7A-216ENST00000543170 ECHDC1Q9NTX5 307 aa22.4■■□□□ 1.18
COPS7A-216ENST00000543170 SCAF8Q9UPN6 1271 aaKnown RBP22.4■■□□□ 1.18
COPS7A-216ENST00000543170 CNTNAP1P78357 1384 aa22.39■■□□□ 1.18
COPS7A-216ENST00000543170 GPR75-ASB3A0A0A6YYF3 556 aa22.39■■□□□ 1.17
COPS7A-216ENST00000543170 RASSF10A6NK89 507 aa22.39■■□□□ 1.17
COPS7A-216ENST00000543170 NF2P35240 595 aa22.39■■□□□ 1.17
COPS7A-216ENST00000543170 CDC42EP5Q6NZY7 148 aa22.39■■□□□ 1.17
COPS7A-216ENST00000543170 FAM83AQ86UY5 434 aa22.39■■□□□ 1.17
COPS7A-216ENST00000543170 HHIPL1Q96JK4 782 aa22.39■■□□□ 1.17
COPS7A-216ENST00000543170 HAUS7Q99871 368 aa22.39■■□□□ 1.17
COPS7A-216ENST00000543170 GBA2Q9HCG7 927 aaPredicted RBP22.39■■□□□ 1.17
COPS7A-216ENST00000543170 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms