RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 SCNN1DP51172 638 aa13.58□□□□□ -0.24
RFC5-209ENST00000543153 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.24
RFC5-209ENST00000543153 ARHGEF10LQ9HCE6 1279 aa13.58□□□□□ -0.24
RFC5-209ENST00000543153 TMEM229AB2RXF0 380 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 HSPA6P17066 643 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 RELBQ01201 579 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 MEIOBQ8N635 442 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 AGBL1Q96MI9 1066 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
RFC5-209ENST00000543153 SLC52A2Q9HAB3 445 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 ETNK1Q9HBU6 452 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 ZNF358Q9NW07 568 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
RFC5-209ENST00000543153 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
RFC5-209ENST00000543153 N4BP2Q86UW6 1770 aaPredicted RBP13.56□□□□□ -0.24
RFC5-209ENST00000543153 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
RFC5-209ENST00000543153 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
RFC5-209ENST00000543153 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
RFC5-209ENST00000543153 RAB6BQ9NRW1 208 aa13.56□□□□□ -0.24
RFC5-209ENST00000543153 PIM2Q9P1W9 311 aa13.56□□□□□ -0.24
RFC5-209ENST00000543153 A0A1W2PRU2 124 aa13.55□□□□□ -0.24
RFC5-209ENST00000543153 AVPP01185 164 aa13.55□□□□□ -0.24
RFC5-209ENST00000543153 SLC39A6Q13433 755 aa13.55□□□□□ -0.24
RFC5-209ENST00000543153 DALRD3Q5D0E6 543 aaKnown RBP13.55□□□□□ -0.24
RFC5-209ENST00000543153 TTC5Q8N0Z6 440 aa13.55□□□□□ -0.24
RFC5-209ENST00000543153 SERTAD1Q9UHV2 236 aa13.55□□□□□ -0.24
RFC5-209ENST00000543153 U2SURPO15042 1029 aaKnown RBP13.54□□□□□ -0.24
RFC5-209ENST00000543153 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
RFC5-209ENST00000543153 CLN3Q13286 438 aa13.54□□□□□ -0.24
RFC5-209ENST00000543153 CTC1Q2NKJ3 1217 aa13.54□□□□□ -0.24
RFC5-209ENST00000543153 C16orf71Q8IYS4 520 aaPredicted RBP13.54□□□□□ -0.24
RFC5-209ENST00000543153 CLP1Q92989 425 aaKnown RBP13.54□□□□□ -0.24
RFC5-209ENST00000543153 CNKSR1Q969H4 720 aa13.54□□□□□ -0.24
RFC5-209ENST00000543153 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
RFC5-209ENST00000543153 LGR6Q9HBX8 967 aa13.54□□□□□ -0.24
RFC5-209ENST00000543153 TJP1Q07157 1748 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 MEN1O00255 615 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 STAU1O95793 577 aaKnown RBP13.53□□□□□ -0.24
RFC5-209ENST00000543153 DDR1Q08345 913 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 C9orf131Q5VYM1 1079 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 USPL1Q5W0Q7 1092 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 INTS5Q6P9B9 1019 aaKnown RBP13.53□□□□□ -0.24
RFC5-209ENST00000543153 TSEN2Q8NCE0 465 aaKnown RBP13.53□□□□□ -0.24
RFC5-209ENST00000543153 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 ZNF395Q9H8N7 513 aaPredicted RBP13.53□□□□□ -0.24
RFC5-209ENST00000543153 COL15A1P39059 1388 aa13.53□□□□□ -0.24
RFC5-209ENST00000543153 CARNS1A5YM72 827 aa13.52□□□□□ -0.25
RFC5-209ENST00000543153 CHRNA5P30532 468 aa13.52□□□□□ -0.25
RFC5-209ENST00000543153 MTHFSDQ2M296 383 aaKnown RBP13.52□□□□□ -0.25
RFC5-209ENST00000543153 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
RFC5-209ENST00000543153 KDF1Q8NAX2 398 aaPredicted RBP13.52□□□□□ -0.25
RFC5-209ENST00000543153 RNF181Q9P0P0 153 aa13.52□□□□□ -0.25
RFC5-209ENST00000543153 SOS1Q07889 1333 aaPredicted RBP13.52□□□□□ -0.25
RFC5-209ENST00000543153 KIAA1551Q9HCM1 1747 aa13.52□□□□□ -0.25
RFC5-209ENST00000543153 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
RFC5-209ENST00000543153 MRC1P22897 1456 aa13.51□□□□□ -0.25
RFC5-209ENST00000543153 POLRMTO00411 1230 aaKnown RBP13.51□□□□□ -0.25
RFC5-209ENST00000543153 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
RFC5-209ENST00000543153 TEFQ10587 303 aa13.51□□□□□ -0.25
RFC5-209ENST00000543153 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
RFC5-209ENST00000543153 ZBTB1Q9Y2K1 713 aa13.51□□□□□ -0.25
RFC5-209ENST00000543153 TOMM70O94826 608 aa13.5□□□□□ -0.25
RFC5-209ENST00000543153 BRD1O95696 1058 aa13.5□□□□□ -0.25
RFC5-209ENST00000543153 IL2RAP01589 272 aa13.5□□□□□ -0.25
RFC5-209ENST00000543153 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
RFC5-209ENST00000543153 SMTNP53814 917 aa13.5□□□□□ -0.25
RFC5-209ENST00000543153 LINC00528Q8N1L1 170 aa13.5□□□□□ -0.25
RFC5-209ENST00000543153 NMRK2Q9NPI5 230 aa13.5□□□□□ -0.25
RFC5-209ENST00000543153 MYH14Q7Z406 1995 aaKnown RBP13.5□□□□□ -0.25
RFC5-209ENST00000543153 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 NPHP1O15259 732 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 STARD3NLO95772 234 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 KCNA3P22001 575 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
RFC5-209ENST00000543153 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
RFC5-209ENST00000543153 SCARF1Q14162 830 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 TLR1Q15399 786 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 CEP350Q5VT06 3117 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
RFC5-209ENST00000543153 A6NJY4 79 aa13.48□□□□□ -0.25
RFC5-209ENST00000543153 AXIN1O15169 862 aa13.48□□□□□ -0.25
RFC5-209ENST00000543153 BMP2P12643 396 aa13.48□□□□□ -0.25
RFC5-209ENST00000543153 NFIXQ14938 502 aa13.48□□□□□ -0.25
RFC5-209ENST00000543153 MRPL14Q6P1L8 145 aaKnown RBP13.48□□□□□ -0.25
RFC5-209ENST00000543153 TNS4Q8IZW8 715 aa13.48□□□□□ -0.25
RFC5-209ENST00000543153 GAS2L2Q8NHY3 880 aa13.48□□□□□ -0.25
RFC5-209ENST00000543153 IRX2Q9BZI1 471 aaPredicted RBP13.48□□□□□ -0.25
RFC5-209ENST00000543153 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
RFC5-209ENST00000543153 PATL2C9JE40 543 aaKnown RBP13.47□□□□□ -0.25
RFC5-209ENST00000543153 ATP2B4P23634 1241 aa13.47□□□□□ -0.25
RFC5-209ENST00000543153 TM4SF1P30408 202 aa13.47□□□□□ -0.25
RFC5-209ENST00000543153 CENPCQ03188 943 aa13.47□□□□□ -0.25
RFC5-209ENST00000543153 CFAP53Q96M91 514 aa13.47□□□□□ -0.25
RFC5-209ENST00000543153 A0A087WZG4 1122 aa13.46□□□□□ -0.25
RFC5-209ENST00000543153 SPINT1O43278 529 aa13.46□□□□□ -0.25
RFC5-209ENST00000543153 PRMT3O60678 531 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms