RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 MANSC4A6NHS7 340 aaPredicted RBP24.64■■□□□ 1.54
CACNA1C-230ENST00000543114 HTTP42858 3142 aa24.64■■□□□ 1.53
CACNA1C-230ENST00000543114 USP2O75604 605 aaPredicted RBP24.63■■□□□ 1.53
CACNA1C-230ENST00000543114 IREB2P48200 963 aaKnown RBP24.63■■□□□ 1.53
CACNA1C-230ENST00000543114 CAVIN4Q5BKX8 364 aa24.63■■□□□ 1.53
CACNA1C-230ENST00000543114 HPS5Q9UPZ3 1129 aa24.63■■□□□ 1.53
CACNA1C-230ENST00000543114 UNCXA6NJT0 531 aa24.62■■□□□ 1.53
CACNA1C-230ENST00000543114 GJA5P36382 358 aa24.62■■□□□ 1.53
CACNA1C-230ENST00000543114 RFX5P48382 616 aaPredicted RBP24.62■■□□□ 1.53
CACNA1C-230ENST00000543114 BCAMP50895 628 aa24.62■■□□□ 1.53
CACNA1C-230ENST00000543114 IFNL1Q8IU54 200 aa24.62■■□□□ 1.53
CACNA1C-230ENST00000543114 TEPSINQ96N21 525 aa24.62■■□□□ 1.53
CACNA1C-230ENST00000543114 TCP10L2B9ZVM9 353 aa24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 IGF2BP3O00425 579 aaKnown RBP eCLIP24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 FRAT2O75474 233 aaPredicted RBP24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 FGFR2P21802 821 aa24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 PUM3Q15397 648 aaKnown RBP24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 TRMT2AQ8IZ69 625 aaKnown RBP24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 TBC1D22AQ8WUA7 517 aa24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 TMEM39BQ9GZU3 492 aa24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 KIF16BQ96L93 1317 aa24.61■■□□□ 1.53
CACNA1C-230ENST00000543114 FKTNO75072 461 aa24.6■■□□□ 1.53
CACNA1C-230ENST00000543114 ALDH1A1P00352 501 aa24.6■■□□□ 1.53
CACNA1C-230ENST00000543114 PKN2Q16513 984 aaKnown RBP24.6■■□□□ 1.53
CACNA1C-230ENST00000543114 ANKRD13AQ8IZ07 590 aa24.6■■□□□ 1.53
CACNA1C-230ENST00000543114 INHBEP58166 350 aa24.59■■□□□ 1.53
CACNA1C-230ENST00000543114 PDE4DIPQ5VU43 2346 aa24.58■■□□□ 1.53
CACNA1C-230ENST00000543114 EYA2O00167 538 aa24.58■■□□□ 1.53
CACNA1C-230ENST00000543114 IFIT1P09914 478 aaKnown RBP24.58■■□□□ 1.53
CACNA1C-230ENST00000543114 HDLBPQ00341 1268 aaKnown RBP24.58■■□□□ 1.53
CACNA1C-230ENST00000543114 CACNB3P54284 484 aa24.57■■□□□ 1.52
CACNA1C-230ENST00000543114 ATG9AQ7Z3C6 839 aa24.57■■□□□ 1.52
CACNA1C-230ENST00000543114 TEKT1Q969V4 418 aa24.57■■□□□ 1.52
CACNA1C-230ENST00000543114 ELP3Q9H9T3 547 aa24.57■■□□□ 1.52
CACNA1C-230ENST00000543114 UBTFL1P0CB47 393 aaPredicted RBP24.56■■□□□ 1.52
CACNA1C-230ENST00000543114 TNNI2P48788 182 aa24.56■■□□□ 1.52
CACNA1C-230ENST00000543114 OPTNQ96CV9 577 aa24.56■■□□□ 1.52
CACNA1C-230ENST00000543114 CENPFP49454 3210 aa24.56■■□□□ 1.52
CACNA1C-230ENST00000543114 SLC5A1P13866 664 aa24.55■■□□□ 1.52
CACNA1C-230ENST00000543114 FBXO46Q6PJ61 603 aaPredicted RBP24.55■■□□□ 1.52
CACNA1C-230ENST00000543114 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.55■■□□□ 1.52
CACNA1C-230ENST00000543114 CNKSR2Q8WXI2 1034 aa24.55■■□□□ 1.52
CACNA1C-230ENST00000543114 ZDHHC15Q96MV8 337 aa24.55■■□□□ 1.52
CACNA1C-230ENST00000543114 NOB1Q9ULX3 412 aaKnown RBP24.55■■□□□ 1.52
CACNA1C-230ENST00000543114 CT47B1P0C2W7 299 aaPredicted RBP24.54■■□□□ 1.52
CACNA1C-230ENST00000543114 VGLL4Q14135 290 aa24.54■■□□□ 1.52
CACNA1C-230ENST00000543114 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.54■■□□□ 1.52
CACNA1C-230ENST00000543114 LPIN2Q92539 896 aa24.54■■□□□ 1.52
CACNA1C-230ENST00000543114 SIL1Q9H173 461 aa24.54■■□□□ 1.52
CACNA1C-230ENST00000543114 MAST3O60307 1309 aa24.54■■□□□ 1.52
CACNA1C-230ENST00000543114 APOBEC3HQ6NTF7 200 aaKnown RBP24.53■■□□□ 1.52
CACNA1C-230ENST00000543114 PTPN18Q99952 460 aa24.53■■□□□ 1.52
CACNA1C-230ENST00000543114 SUGT1Q9Y2Z0 365 aa24.53■■□□□ 1.52
CACNA1C-230ENST00000543114 TESPA1A2RU30 521 aaPredicted RBP24.52■■□□□ 1.52
CACNA1C-230ENST00000543114 CRHR2Q13324 411 aa24.52■■□□□ 1.52
CACNA1C-230ENST00000543114 MS4A4AQ96JQ5 239 aa24.51■■□□□ 1.51
CACNA1C-230ENST00000543114 MRIQ9BWK5 157 aa24.51■■□□□ 1.51
CACNA1C-230ENST00000543114 API5Q9BZZ5 524 aaKnown RBP24.51■■□□□ 1.51
CACNA1C-230ENST00000543114 TMOD2Q9NZR1 351 aa24.51■■□□□ 1.51
CACNA1C-230ENST00000543114 LRRFIP2Q9Y608 721 aaKnown RBP24.51■■□□□ 1.51
CACNA1C-230ENST00000543114 RPAP1Q9BWH6 1393 aaPredicted RBP24.51■■□□□ 1.51
CACNA1C-230ENST00000543114 CIAO1O76071 339 aa24.5■■□□□ 1.51
CACNA1C-230ENST00000543114 ATP2B3Q16720 1220 aa24.5■■□□□ 1.51
CACNA1C-230ENST00000543114 FBXO3Q9UK99 471 aa24.5■■□□□ 1.51
CACNA1C-230ENST00000543114 TRIM17Q9Y577 477 aa24.5■■□□□ 1.51
CACNA1C-230ENST00000543114 MAP3K9P80192 1104 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 FKBP1CQ5VVH2 108 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 OTUD7BQ6GQQ9 843 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 HHIPL2Q6UWX4 724 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 OTOP1Q7RTM1 612 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 FAM83AQ86UY5 434 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 WDR66Q8TBY9 1149 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 MEIS3Q99687 375 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 PA2G4Q9UQ80 394 aaKnown RBP24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 CSADQ9Y600 493 aa24.49■■□□□ 1.51
CACNA1C-230ENST00000543114 CCER2I3L3R5 266 aa24.48■■□□□ 1.51
CACNA1C-230ENST00000543114 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
CACNA1C-230ENST00000543114 OTUD5Q96G74 571 aa24.48■■□□□ 1.51
CACNA1C-230ENST00000543114 BRCA2P51587 3418 aa24.48■■□□□ 1.51
CACNA1C-230ENST00000543114 PRDX5P30044 214 aa24.47■■□□□ 1.51
CACNA1C-230ENST00000543114 RARSP54136 660 aaKnown RBP24.47■■□□□ 1.51
CACNA1C-230ENST00000543114 CD99L2Q8TCZ2 262 aa24.47■■□□□ 1.51
CACNA1C-230ENST00000543114 CEP126Q9P2H0 1117 aa24.47■■□□□ 1.51
CACNA1C-230ENST00000543114 DAGLAQ9Y4D2 1042 aa24.47■■□□□ 1.51
CACNA1C-230ENST00000543114 SNCAIPQ9Y6H5 919 aa24.47■■□□□ 1.51
CACNA1C-230ENST00000543114 AK9Q5TCS8 1911 aa24.46■■□□□ 1.51
CACNA1C-230ENST00000543114 CCL15-CCL14A0A0B4J2E2 113 aa24.46■■□□□ 1.51
CACNA1C-230ENST00000543114 SPDYE5A6NIY4 337 aa24.46■■□□□ 1.51
CACNA1C-230ENST00000543114 DIXDC1Q155Q3 683 aa24.46■■□□□ 1.51
CACNA1C-230ENST00000543114 CCL15Q16663 113 aa24.46■■□□□ 1.51
CACNA1C-230ENST00000543114 WRNIP1Q96S55 665 aa24.46■■□□□ 1.51
CACNA1C-230ENST00000543114 MKI67P46013 3256 aaKnown RBP24.46■■□□□ 1.51
CACNA1C-230ENST00000543114 IL15P40933 162 aaPredicted RBP24.45■■□□□ 1.5
CACNA1C-230ENST00000543114 PHKA1P46020 1223 aa24.45■■□□□ 1.5
CACNA1C-230ENST00000543114 CAP1Q01518 475 aa24.45■■□□□ 1.5
CACNA1C-230ENST00000543114 ERO1AQ96HE7 468 aa24.45■■□□□ 1.5
CACNA1C-230ENST00000543114 MYH2Q9UKX2 1941 aa24.45■■□□□ 1.5
CACNA1C-230ENST00000543114 GTF2A2P52657 109 aa24.44■■□□□ 1.5
CACNA1C-230ENST00000543114 ZKSCAN4Q969J2 545 aaPredicted RBP24.44■■□□□ 1.5
CACNA1C-230ENST00000543114 COPRSQ9NQ92 184 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms