RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 GBP3Q9H0R5 595 aa11.18□□□□□ -0.62
TCF4-208ENST00000543082 PFKFB1P16118 471 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 ATP2B1P20020 1258 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 CMA1P23946 247 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 TBX2Q13207 712 aaPredicted RBP11.17□□□□□ -0.62
TCF4-208ENST00000543082 MCM6Q14566 821 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 ZNF274Q96GC6 653 aaPredicted RBP11.17□□□□□ -0.62
TCF4-208ENST00000543082 DEF6Q9H4E7 631 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 MARF1Q9Y4F3 1742 aaKnown RBP11.17□□□□□ -0.62
TCF4-208ENST00000543082 CUTAO60888 179 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 CPP00450 1065 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 ATP5JP18859 108 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 CCT2P78371 535 aaKnown RBP11.17□□□□□ -0.62
TCF4-208ENST00000543082 MCMDC2Q4G0Z9 681 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 OLFM4Q6UX06 510 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 STOX1Q6ZVD7 989 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 FAN1Q9Y2M0 1017 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
TCF4-208ENST00000543082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.17□□□□□ -0.62
TCF4-208ENST00000543082 LMO7Q8WWI1 1683 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 UTYO14607 1347 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 TUBBP07437 444 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 GOLGA8FQ08AF8 430 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 GOLGA8DPQ0D2H9 430 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 TOGARAM2Q6ZUX3 1019 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 SUGP1Q8IWZ8 645 aaKnown RBP11.16□□□□□ -0.62
TCF4-208ENST00000543082 EFCAB13Q8IY85 973 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 SEC62Q99442 399 aaKnown RBP11.16□□□□□ -0.62
TCF4-208ENST00000543082 ANKZF1Q9H8Y5 726 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 DBF4Q9UBU7 674 aaPredicted RBP11.16□□□□□ -0.62
TCF4-208ENST00000543082 EXOSC10Q01780 885 aaKnown RBP11.16□□□□□ -0.62
TCF4-208ENST00000543082 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 SUCLG2Q96I99 432 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 NCOA5Q9HCD5 579 aaKnown RBP11.16□□□□□ -0.62
TCF4-208ENST00000543082 MED4Q9NPJ6 270 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
TCF4-208ENST00000543082 SH3TC1Q8TE82 1336 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 GRM8O00222 908 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.62
TCF4-208ENST00000543082 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 FAM107BQ9H098 131 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 BICC1Q9H694 974 aaKnown RBP11.15□□□□□ -0.62
TCF4-208ENST00000543082 CDC23Q9UJX2 597 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 DIP2BQ9P265 1576 aa11.15□□□□□ -0.62
TCF4-208ENST00000543082 CCDC175P0C221 793 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 SYKP43405 635 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 AXDND1Q5T1B0 1012 aaPredicted RBP11.14□□□□□ -0.63
TCF4-208ENST00000543082 SPECC1LQ69YQ0 1117 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 LRRC31Q6UY01 552 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 PDILTQ8N807 584 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 TC2NQ8N9U0 490 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 LINS1Q8NG48 757 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 EDC3Q96F86 508 aaKnown RBP11.14□□□□□ -0.63
TCF4-208ENST00000543082 C8orf76Q96K31 380 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 C19orf44Q9H6X5 657 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 AKAP2Q9Y2D5 859 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 RGPD8O14715 1765 aaPredicted RBP11.14□□□□□ -0.63
TCF4-208ENST00000543082 PPFIA4O75335 1185 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
TCF4-208ENST00000543082 ANXA1P04083 346 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 KARSQ15046 597 aaKnown RBP11.14□□□□□ -0.63
TCF4-208ENST00000543082 ANO1Q5XXA6 986 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 FOXR1Q6PIV2 292 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 CNNM3Q8NE01 707 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 DRC1Q96MC2 740 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 INTS13Q9NVM9 706 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
TCF4-208ENST00000543082 DDX60Q8IY21 1712 aaKnown RBP11.14□□□□□ -0.63
TCF4-208ENST00000543082 FDPSP14324 419 aaKnown RBP11.13□□□□□ -0.63
TCF4-208ENST00000543082 MMP14P50281 582 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 CASP8Q14790 479 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 CWF19L2Q2TBE0 894 aaKnown RBP11.13□□□□□ -0.63
TCF4-208ENST00000543082 ISM2Q6H9L7 571 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 MMS22LQ6ZRQ5 1243 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 ANKARQ7Z5J8 1434 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 UBR1Q8IWV7 1749 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 CCDC102AQ96A19 550 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 KAZALD1Q96I82 304 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 PNKPQ96T60 521 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 DSCC1Q9BVC3 393 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 ABCB6Q9NP58 842 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 KIF5CO60282 957 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 ABCB7O75027 752 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 N4BP1O75113 896 aaKnown RBP11.13□□□□□ -0.63
TCF4-208ENST00000543082 POLR3DP05423 398 aaPredicted RBP11.13□□□□□ -0.63
TCF4-208ENST00000543082 HOXC9P31274 260 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
TCF4-208ENST00000543082 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 CCDC91Q7Z6B0 441 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 ANKRD24Q8TF21 1146 aa11.13□□□□□ -0.63
TCF4-208ENST00000543082 ZSWIM4Q9H7M6 989 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms