RNA–Protein interactions for RNA: ENST00000543049.1

NLRC5-222, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 484 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-222	ENST00000543049	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
NLRC5-222	ENST00000543049	PAK6	Q9NQU5	681 aa	Predicted RBP	13.48	□□□□□ -0.25
NLRC5-222	ENST00000543049	IRF6	O14896	467 aa		13.47	□□□□□ -0.25
NLRC5-222	ENST00000543049	PDE8A	O60658	829 aa		13.47	□□□□□ -0.25
NLRC5-222	ENST00000543049	NEFM	P07197	916 aa		13.47	□□□□□ -0.25
NLRC5-222	ENST00000543049	KLRK1	P26718	216 aa		13.47	□□□□□ -0.25
NLRC5-222	ENST00000543049	MAP3K12	Q12852	859 aa		13.47	□□□□□ -0.25
NLRC5-222	ENST00000543049	CHPF2	Q9P2E5	772 aa		13.47	□□□□□ -0.25
NLRC5-222	ENST00000543049	PRUNE2	Q8WUY3	3088 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	FAM205A	Q6ZU69	1335 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	ADGRA2	Q96PE1	1338 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	PDHX	O00330	501 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	FLT3LG	P49771	235 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	MDM2	Q00987	491 aa	Predicted RBP	13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	ERO1B	Q86YB8	467 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	TEPSIN	Q96N21	525 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	NBPF3	Q9H094	633 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	BSDC1	Q9NW68	430 aa	Predicted RBP	13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	LEMD3	Q9Y2U8	911 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	DLG5	Q8TDM6	1919 aa		13.46	□□□□□ -0.25
NLRC5-222	ENST00000543049	ECM29	Q5VYK3	1845 aa		13.46	□□□□□ -0.26
NLRC5-222	ENST00000543049	TNFAIP1	Q13829	316 aa		13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	TJAP1	Q5JTD0	557 aa		13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	ANKLE1	Q8NAG6	615 aa		13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	MYLIP	Q8WY64	445 aa		13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	CDC5L	Q99459	802 aa	Known RBP	13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	SEMA6B	Q9H3T3	888 aa		13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	ZNF70	Q9UC06	446 aa	Predicted RBP	13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	SNCAIP	Q9Y6H5	919 aa		13.45	□□□□□ -0.26
NLRC5-222	ENST00000543049	NFE2L2	Q16236	605 aa		13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	ANKRD23	Q86SG2	305 aa		13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	PXYLP1	Q8TE99	480 aa		13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	TMEM39B	Q9GZU3	492 aa		13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	C11orf49	Q9H6J7	331 aa		13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	CD209	Q9NNX6	404 aa		13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	TAOK2	Q9UL54	1235 aa		13.44	□□□□□ -0.26
NLRC5-222	ENST00000543049	TCP10L2	B9ZVM9	353 aa		13.43	□□□□□ -0.26
NLRC5-222	ENST00000543049	PPIL2	Q13356	520 aa		13.43	□□□□□ -0.26
NLRC5-222	ENST00000543049	KRT24	Q2M2I5	525 aa		13.43	□□□□□ -0.26
NLRC5-222	ENST00000543049	SPDYE2	Q495Y8	402 aa		13.43	□□□□□ -0.26
NLRC5-222	ENST00000543049	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
NLRC5-222	ENST00000543049	TDRD3	Q9H7E2	651 aa	Known RBP	13.43	□□□□□ -0.26
NLRC5-222	ENST00000543049	TIMELESS	Q9UNS1	1208 aa		13.43	□□□□□ -0.26
NLRC5-222	ENST00000543049	MUC3A	Q02505	3323 aa		13.42	□□□□□ -0.26
NLRC5-222	ENST00000543049	PCCA	P05165	728 aa	Predicted RBP	13.42	□□□□□ -0.26
NLRC5-222	ENST00000543049	BCR	P11274	1271 aa		13.42	□□□□□ -0.26
NLRC5-222	ENST00000543049	FOSL2	P15408	326 aa		13.41	□□□□□ -0.26
NLRC5-222	ENST00000543049	RIC3	Q7Z5B4	369 aa		13.41	□□□□□ -0.26
NLRC5-222	ENST00000543049	WRNIP1	Q96S55	665 aa		13.41	□□□□□ -0.26
NLRC5-222	ENST00000543049	JAG2	Q9Y219	1238 aa		13.41	□□□□□ -0.26
NLRC5-222	ENST00000543049	COL2A1	P02458	1487 aa	Predicted RBP	13.41	□□□□□ -0.26
NLRC5-222	ENST00000543049	CYP2C8	P10632	490 aa		13.4	□□□□□ -0.26
NLRC5-222	ENST00000543049	KCNJ4	P48050	445 aa		13.4	□□□□□ -0.26
NLRC5-222	ENST00000543049	IRF5	Q13568	498 aa		13.4	□□□□□ -0.26
NLRC5-222	ENST00000543049	MYD88	Q99836	296 aa		13.4	□□□□□ -0.26
NLRC5-222	ENST00000543049	GREM2	Q9H772	168 aa		13.4	□□□□□ -0.26
NLRC5-222	ENST00000543049	LAMA2	P24043	3122 aa	Known RBP	13.4	□□□□□ -0.26
NLRC5-222	ENST00000543049	TNPO2	O14787	897 aa	Known RBP	13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	TNNI2	P48788	182 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	CTSW	P56202	376 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	PPAT	Q06203	517 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	HDGFL1	Q5TGJ6	251 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	CCDC191	Q8NCU4	936 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	TTLL11	Q8NHH1	800 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	PLEKHF1	Q96S99	279 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	PARK7	Q99497	189 aa	Known RBP	13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	ANKRD2	Q9GZV1	360 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	BABAM1	Q9NWV8	329 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	DBF4	Q9UBU7	674 aa	Predicted RBP	13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	MGAM	O43451	1857 aa		13.39	□□□□□ -0.27
NLRC5-222	ENST00000543049	TTYH1	Q9H313	450 aa	Predicted RBP	13.38	□□□□□ -0.27
NLRC5-222	ENST00000543049	HYPK	Q9NX55	129 aa		13.38	□□□□□ -0.27
NLRC5-222	ENST00000543049	CWC25	Q9NXE8	425 aa	Predicted RBP	13.38	□□□□□ -0.27
NLRC5-222	ENST00000543049	SPEF2	Q9C093	1822 aa		13.38	□□□□□ -0.27
NLRC5-222	ENST00000543049	SYNGAP1	Q96PV0	1343 aa		13.38	□□□□□ -0.27
NLRC5-222	ENST00000543049	DDX60L	Q5H9U9	1706 aa	Known RBP	13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	SNAP23	O00161	211 aa		13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	PPP2R1A	P30153	589 aa		13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	IGHMBP2	P38935	993 aa	Known RBP	13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	FKBP1A	P62942	108 aa	Known RBP	13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	MOGS	Q13724	837 aa		13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	DZIP1L	Q8IYY4	767 aa	Known RBP	13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	PFAS	O15067	1338 aa		13.37	□□□□□ -0.27
NLRC5-222	ENST00000543049	GPAT2	Q6NUI2	795 aa		13.36	□□□□□ -0.27
NLRC5-222	ENST00000543049	USP38	Q8NB14	1042 aa		13.36	□□□□□ -0.27
NLRC5-222	ENST00000543049	HMX1	Q9NP08	348 aa	Predicted RBP	13.36	□□□□□ -0.27
NLRC5-222	ENST00000543049	TTF2	Q9UNY4	1162 aa	Known RBP	13.36	□□□□□ -0.27
NLRC5-222	ENST00000543049	IL1R1	P14778	569 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	GOLGA2	Q08379	1002 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	TRIM32	Q13049	653 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	LRRC26	Q2I0M4	334 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	SNX27	Q96L92	541 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	SERPINA10	Q9UK55	444 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	OGDHL	Q9ULD0	1010 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	KCNH4	Q9UQ05	1017 aa		13.35	□□□□□ -0.27
NLRC5-222	ENST00000543049	INPP5B	P32019	993 aa		13.34	□□□□□ -0.27
NLRC5-222	ENST00000543049	CACNB3	P54284	484 aa		13.34	□□□□□ -0.27

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