RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 PAPPA2Q9BXP8 1791 aa19.09■□□□□ 0.65
ECHDC2-223ENST00000542552 MYO1BO43795 1136 aa19.08■□□□□ 0.64
ECHDC2-223ENST00000542552 RBM5P52756 815 aaKnown RBP eCLIP19.08■□□□□ 0.64
ECHDC2-223ENST00000542552 HUNKP57058 714 aa19.08■□□□□ 0.64
ECHDC2-223ENST00000542552 FKBP1BP68106 108 aa19.08■□□□□ 0.64
ECHDC2-223ENST00000542552 SPDYE2Q495Y8 402 aa19.08■□□□□ 0.64
ECHDC2-223ENST00000542552 PRAMEF18Q5VWM3 479 aa19.08■□□□□ 0.64
ECHDC2-223ENST00000542552 DEFB129Q9H1M3 183 aa19.08■□□□□ 0.64
ECHDC2-223ENST00000542552 MAST3O60307 1309 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 CLRN2A0PK11 232 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 RASGRF1Q13972 1273 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 HHIPL2Q6UWX4 724 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 SIRT2Q8IXJ6 389 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 RPAP2Q8IXW5 612 aaPredicted RBP19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 TEKT1Q969V4 418 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 ZDHHC15Q96MV8 337 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 NEUROD6Q96NK8 337 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 CHMP4BQ9H444 224 aaKnown RBP19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 PPP2R3BQ9Y5P8 575 aa19.07■□□□□ 0.64
ECHDC2-223ENST00000542552 TNNI3KQ59H18 835 aa19.06■□□□□ 0.64
ECHDC2-223ENST00000542552 TDRD3Q9H7E2 651 aaKnown RBP19.06■□□□□ 0.64
ECHDC2-223ENST00000542552 ZNF70Q9UC06 446 aaPredicted RBP19.06■□□□□ 0.64
ECHDC2-223ENST00000542552 FPGT-TNNI3KV9GXZ4 949 aa19.06■□□□□ 0.64
ECHDC2-223ENST00000542552 HSPA1AP0DMV8 641 aaKnown RBP19.05■□□□□ 0.64
ECHDC2-223ENST00000542552 HSPA1BP0DMV9 641 aaKnown RBP19.05■□□□□ 0.64
ECHDC2-223ENST00000542552 PRDX5P30044 214 aa19.05■□□□□ 0.64
ECHDC2-223ENST00000542552 OS9Q13438 667 aaPredicted RBP19.05■□□□□ 0.64
ECHDC2-223ENST00000542552 APOBEC3HQ6NTF7 200 aaKnown RBP19.05■□□□□ 0.64
ECHDC2-223ENST00000542552 PAXIP1Q6ZW49 1069 aaPredicted RBP19.05■□□□□ 0.64
ECHDC2-223ENST00000542552 ARID4AP29374 1257 aaPredicted RBP19.04■□□□□ 0.64
ECHDC2-223ENST00000542552 MAP2K2P36507 400 aa19.04■□□□□ 0.64
ECHDC2-223ENST00000542552 RGMBQ6NW40 437 aa19.04■□□□□ 0.64
ECHDC2-223ENST00000542552 VEZTQ9HBM0 779 aa19.04■□□□□ 0.64
ECHDC2-223ENST00000542552 WBP1LQ9NX94 342 aa19.04■□□□□ 0.64
ECHDC2-223ENST00000542552 FAM155AB1AL88 458 aaPredicted RBP19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 LDHBP07195 334 aaKnown RBP19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 RASA3Q14644 834 aa19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 GORABQ5T7V8 394 aa19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 MOB2Q70IA6 237 aa19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 ZGPATQ8N5A5 531 aaKnown RBP19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 HMG20BQ9P0W2 317 aa19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 EXOC6BQ9Y2D4 811 aa19.03■□□□□ 0.64
ECHDC2-223ENST00000542552 SSC5DA1L4H1 1573 aa19.02■□□□□ 0.64
ECHDC2-223ENST00000542552 AOC2O75106 756 aa19.02■□□□□ 0.64
ECHDC2-223ENST00000542552 NF2P35240 595 aa19.02■□□□□ 0.64
ECHDC2-223ENST00000542552 TNFAIP1Q13829 316 aa19.02■□□□□ 0.64
ECHDC2-223ENST00000542552 DBNDD2Q9BQY9 259 aa19.02■□□□□ 0.64
ECHDC2-223ENST00000542552 AKAP11Q9UKA4 1901 aa19.02■□□□□ 0.63
ECHDC2-223ENST00000542552 UBE2Q2LH0YL09 131 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 HMMRO75330 724 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 UQCRFS1P1P0C7P4 283 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 ZNF157P51786 506 aaPredicted RBP19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 MAP2K1Q02750 393 aaPredicted RBP19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 GRM1Q13255 1194 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 DIXDC1Q155Q3 683 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 HSP90AB4PQ58FF6 505 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 FKBP1CQ5VVH2 108 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 ERC1Q8IUD2 1116 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 SPATA5Q8NB90 893 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 CCDC102AQ96A19 550 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 EAF2Q96CJ1 260 aaPredicted RBP19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 ZNF512BQ96KM6 892 aaPredicted RBP19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 TEPSINQ96N21 525 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 DAGLAQ9Y4D2 1042 aa19.01■□□□□ 0.63
ECHDC2-223ENST00000542552 MYH2Q9UKX2 1941 aa19■□□□□ 0.63
ECHDC2-223ENST00000542552 MCAMP43121 646 aa19■□□□□ 0.63
ECHDC2-223ENST00000542552 NOGQ13253 232 aa19■□□□□ 0.63
ECHDC2-223ENST00000542552 SUPT20HL1Q3ZLR7 823 aa19■□□□□ 0.63
ECHDC2-223ENST00000542552 LDLRAD1Q5T700 205 aa19■□□□□ 0.63
ECHDC2-223ENST00000542552 NBPF12Q5TAG4 269 aaPredicted RBP19■□□□□ 0.63
ECHDC2-223ENST00000542552 PI16Q6UXB8 463 aa19■□□□□ 0.63
ECHDC2-223ENST00000542552 DBNLQ9UJU6 430 aaKnown RBP19■□□□□ 0.63
ECHDC2-223ENST00000542552 TCP10L2B9ZVM9 353 aa18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 SLC10A3P09131 477 aa18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 RRP1P56182 461 aaKnown RBP18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 MAP3K11Q16584 847 aa18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 SPTY2D1Q68D10 685 aaPredicted RBP18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 FAM163AQ96GL9 167 aaPredicted RBP18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 ZIC5Q96T25 663 aa18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 ABCF2Q9UG63 623 aa18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 GAKO14976 1311 aa18.99■□□□□ 0.63
ECHDC2-223ENST00000542552 FOXN1O15353 648 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 TNNI2P48788 182 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 CACNB3P54284 484 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 CCDC158Q5M9N0 1113 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 ARMC9Q7Z3E5 817 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 FAM83AQ86UY5 434 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 RASAL3Q86YV0 1011 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 RHPN1Q8TCX5 695 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 ZNF384Q8TF68 577 aa18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 CCDC8Q9H0W5 538 aaPredicted RBP18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 TLR7Q9NYK1 1049 aaKnown RBP18.98■□□□□ 0.63
ECHDC2-223ENST00000542552 TTLL12Q14166 644 aaPredicted RBP18.97■□□□□ 0.63
ECHDC2-223ENST00000542552 TTC39AQ5SRH9 613 aa18.97■□□□□ 0.63
ECHDC2-223ENST00000542552 CDC42EP5Q6NZY7 148 aa18.97■□□□□ 0.63
ECHDC2-223ENST00000542552 CDAN1Q8IWY9 1227 aa18.97■□□□□ 0.63
ECHDC2-223ENST00000542552 TMEM39BQ9GZU3 492 aa18.97■□□□□ 0.63
ECHDC2-223ENST00000542552 UNCXA6NJT0 531 aa18.96■□□□□ 0.63
ECHDC2-223ENST00000542552 PPP1R12BO60237 982 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms