RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 OGFOD1Q8N543 542 aa27.96■■■□□ 2.07
HOMER3-205ENST00000542541 TTF2Q9UNY4 1162 aaKnown RBP27.96■■■□□ 2.07
HOMER3-205ENST00000542541 ZBTB12Q9Y330 459 aaPredicted RBP27.96■■■□□ 2.07
HOMER3-205ENST00000542541 ZFYP08048 801 aaPredicted RBP27.95■■■□□ 2.06
HOMER3-205ENST00000542541 GSTO1P78417 241 aa27.95■■■□□ 2.06
HOMER3-205ENST00000542541 SLC9C2Q5TAH2 1124 aa27.95■■■□□ 2.06
HOMER3-205ENST00000542541 HDAC9Q9UKV0 1011 aa27.95■■■□□ 2.06
HOMER3-205ENST00000542541 F8W031 263 aaPredicted RBP27.94■■■□□ 2.06
HOMER3-205ENST00000542541 MECOMQ03112 1051 aa27.94■■■□□ 2.06
HOMER3-205ENST00000542541 USP17L8P0C7I0 530 aa27.93■■■□□ 2.06
HOMER3-205ENST00000542541 GMPSP49915 693 aaPredicted RBP27.93■■■□□ 2.06
HOMER3-205ENST00000542541 GRIK5Q16478 980 aa27.93■■■□□ 2.06
HOMER3-205ENST00000542541 NSUN4Q96CB9 384 aaKnown RBP27.93■■■□□ 2.06
HOMER3-205ENST00000542541 MRIQ9BWK5 157 aa27.93■■■□□ 2.06
HOMER3-205ENST00000542541 PSME4Q14997 1843 aa27.93■■■□□ 2.06
HOMER3-205ENST00000542541 GLTPD2A6NH11 291 aa27.92■■■□□ 2.06
HOMER3-205ENST00000542541 HIP1O00291 1037 aa27.92■■■□□ 2.06
HOMER3-205ENST00000542541 DDNO94850 711 aaPredicted RBP27.92■■■□□ 2.06
HOMER3-205ENST00000542541 LDHCP07864 332 aa27.92■■■□□ 2.06
HOMER3-205ENST00000542541 HDLBPQ00341 1268 aaKnown RBP27.92■■■□□ 2.06
HOMER3-205ENST00000542541 NAA16Q6N069 864 aaPredicted RBP27.92■■■□□ 2.06
HOMER3-205ENST00000542541 MAGEB6Q8N7X4 407 aa27.92■■■□□ 2.06
HOMER3-205ENST00000542541 RFX7Q2KHR2 1363 aa27.92■■■□□ 2.06
HOMER3-205ENST00000542541 RNF113AO15541 343 aaKnown RBP27.91■■■□□ 2.06
HOMER3-205ENST00000542541 PDE6AP16499 860 aa27.91■■■□□ 2.06
HOMER3-205ENST00000542541 UBE3CQ15386 1083 aa27.91■■■□□ 2.06
HOMER3-205ENST00000542541 ZNF646O15015 1829 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-205ENST00000542541 ADD2P35612 726 aa27.9■■■□□ 2.06
HOMER3-205ENST00000542541 CYP7A1P22680 504 aa27.89■■■□□ 2.06
HOMER3-205ENST00000542541 HHIPL2Q6UWX4 724 aa27.89■■■□□ 2.06
HOMER3-205ENST00000542541 TEKT1Q969V4 418 aa27.89■■■□□ 2.06
HOMER3-205ENST00000542541 CNOT7Q9UIV1 285 aaKnown RBP27.89■■■□□ 2.06
HOMER3-205ENST00000542541 SERPINA10Q9UK55 444 aa27.89■■■□□ 2.06
HOMER3-205ENST00000542541 SCNN1DP51172 638 aa27.89■■■□□ 2.05
HOMER3-205ENST00000542541 FAM163AQ96GL9 167 aaPredicted RBP27.89■■■□□ 2.05
HOMER3-205ENST00000542541 ZNF532Q9HCE3 1301 aa27.88■■■□□ 2.05
HOMER3-205ENST00000542541 H7C1D1 291 aa27.88■■■□□ 2.05
HOMER3-205ENST00000542541 LMOD1P29536 600 aaPredicted RBP27.88■■■□□ 2.05
HOMER3-205ENST00000542541 DIAPH3Q9NSV4 1193 aa27.88■■■□□ 2.05
HOMER3-205ENST00000542541 GPRC5DQ9NZD1 345 aa27.88■■■□□ 2.05
HOMER3-205ENST00000542541 DIXDC1Q155Q3 683 aa27.87■■■□□ 2.05
HOMER3-205ENST00000542541 MICALL2Q8IY33 904 aa27.87■■■□□ 2.05
HOMER3-205ENST00000542541 ZNF384Q8TF68 577 aa27.87■■■□□ 2.05
HOMER3-205ENST00000542541 L3MBTL3Q96JM7 780 aaPredicted RBP27.87■■■□□ 2.05
HOMER3-205ENST00000542541 CRKP46108 304 aa27.86■■■□□ 2.05
HOMER3-205ENST00000542541 ZNF280AP59817 542 aaPredicted RBP27.86■■■□□ 2.05
HOMER3-205ENST00000542541 CASC1Q6TDU7 716 aa27.86■■■□□ 2.05
HOMER3-205ENST00000542541 TCRBV5S4A2TA0A5A2 114 aa27.85■■■□□ 2.05
HOMER3-205ENST00000542541 CDC45O75419 566 aa27.85■■■□□ 2.05
HOMER3-205ENST00000542541 RBM5P52756 815 aaKnown RBP eCLIP27.85■■■□□ 2.05
HOMER3-205ENST00000542541 APPBP2Q92624 585 aa27.85■■■□□ 2.05
HOMER3-205ENST00000542541 NOL10Q9BSC4 688 aaKnown RBP27.85■■■□□ 2.05
HOMER3-205ENST00000542541 DOCK2Q92608 1830 aa27.85■■■□□ 2.05
HOMER3-205ENST00000542541 MROH7-TTC4A0A0A0MT08 1334 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 BAG3O95817 575 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 CHMLP26374 656 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 ZMYM1Q5SVZ6 1142 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 CERS3Q8IU89 383 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 RUFY2Q8WXA3 655 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 ZDHHC15Q96MV8 337 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 GAKO14976 1311 aa27.84■■■□□ 2.05
HOMER3-205ENST00000542541 DLGAP5Q15398 846 aa27.83■■■□□ 2.05
HOMER3-205ENST00000542541 MTMR14Q8NCE2 650 aa27.83■■■□□ 2.05
HOMER3-205ENST00000542541 MYOZ2Q9NPC6 264 aa27.83■■■□□ 2.05
HOMER3-205ENST00000542541 HELLSQ9NRZ9 838 aa27.83■■■□□ 2.05
HOMER3-205ENST00000542541 IQCA1LA6NCM1 817 aa27.82■■■□□ 2.04
HOMER3-205ENST00000542541 CFAP100Q494V2 611 aa27.82■■■□□ 2.04
HOMER3-205ENST00000542541 DAGLAQ9Y4D2 1042 aa27.82■■■□□ 2.04
HOMER3-205ENST00000542541 GPR75-ASB3A0A0A6YYF3 556 aa27.81■■■□□ 2.04
HOMER3-205ENST00000542541 HACL1Q9UJ83 578 aa27.81■■■□□ 2.04
HOMER3-205ENST00000542541 CHGBP05060 677 aa27.81■■■□□ 2.04
HOMER3-205ENST00000542541 EPS15P42566 896 aa27.81■■■□□ 2.04
HOMER3-205ENST00000542541 NMIQ13287 307 aaPredicted RBP27.81■■■□□ 2.04
HOMER3-205ENST00000542541 SLFNL1Q499Z3 407 aa27.81■■■□□ 2.04
HOMER3-205ENST00000542541 CWC27Q6UX04 472 aaKnown RBP27.81■■■□□ 2.04
HOMER3-205ENST00000542541 ADGRA1Q86SQ6 560 aa27.81■■■□□ 2.04
HOMER3-205ENST00000542541 MAGEB6P1A0A0J9YX57 407 aa27.8■■■□□ 2.04
HOMER3-205ENST00000542541 PPP4CP60510 307 aa27.8■■■□□ 2.04
HOMER3-205ENST00000542541 MCMDC2Q4G0Z9 681 aa27.8■■■□□ 2.04
HOMER3-205ENST00000542541 OSBP2Q969R2 916 aa27.8■■■□□ 2.04
HOMER3-205ENST00000542541 AIDAQ96BJ3 306 aa27.8■■■□□ 2.04
HOMER3-205ENST00000542541 FAM227BQ96M60 508 aa27.8■■■□□ 2.04
HOMER3-205ENST00000542541 MYO5AQ9Y4I1 1855 aaKnown RBP27.8■■■□□ 2.04
HOMER3-205ENST00000542541 AK9Q5TCS8 1911 aa27.79■■■□□ 2.04
HOMER3-205ENST00000542541 SHTN1A0MZ66 631 aa27.79■■■□□ 2.04
HOMER3-205ENST00000542541 PLCG2P16885 1265 aa27.79■■■□□ 2.04
HOMER3-205ENST00000542541 BTDP43251 543 aa27.79■■■□□ 2.04
HOMER3-205ENST00000542541 MIGA1Q8NAN2 632 aa27.79■■■□□ 2.04
HOMER3-205ENST00000542541 PUS7LQ9H0K6 701 aaKnown RBP27.79■■■□□ 2.04
HOMER3-205ENST00000542541 ADARB2Q9NS39 739 aaKnown RBP27.79■■■□□ 2.04
HOMER3-205ENST00000542541 MAST2Q6P0Q8 1798 aa27.79■■■□□ 2.04
HOMER3-205ENST00000542541 SPDYE2BA6NHP3 402 aa27.78■■■□□ 2.04
HOMER3-205ENST00000542541 SPDYE6P0CI01 402 aa27.78■■■□□ 2.04
HOMER3-205ENST00000542541 RBM26Q5T8P6 1007 aaKnown RBP27.78■■■□□ 2.04
HOMER3-205ENST00000542541 APOBEC3HQ6NTF7 200 aaKnown RBP27.78■■■□□ 2.04
HOMER3-205ENST00000542541 AATFQ9NY61 560 aaKnown RBP eCLIP27.78■■■□□ 2.04
HOMER3-205ENST00000542541 A0A0D9SFI3 127 aa27.78■■■□□ 2.04
HOMER3-205ENST00000542541 MYO1BO43795 1136 aa27.78■■■□□ 2.04
HOMER3-205ENST00000542541 MFAP1P55081 439 aaKnown RBP27.78■■■□□ 2.04
HOMER3-205ENST00000542541 KIF4BQ2VIQ3 1234 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms