RNA–Protein interactions for RNA: ENST00000542411.5

CYB561A3-218, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-218ENST00000542411 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.19
CYB561A3-218ENST00000542411 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 ARID4AP29374 1257 aaPredicted RBP13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 CRKP46108 304 aa13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 ERICH6Q7L0X2 663 aa13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 DZIP1Q86YF9 867 aaKnown RBP13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 TMOD2Q9NZR1 351 aa13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.89□□□□□ -0.19
CYB561A3-218ENST00000542411 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 LDHCP07864 332 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 NF2P35240 595 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 HHIPL2Q6UWX4 724 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 CREBZFQ9NS37 354 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 LRP2BPQ9P2M1 347 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 DBNLQ9UJU6 430 aaKnown RBP13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 PASKQ96RG2 1323 aa13.88□□□□□ -0.19
CYB561A3-218ENST00000542411 SCN9AQ15858 1988 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 TRAF5O00463 557 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 CELF2O95319 508 aaKnown RBP13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 GSTO1P78417 241 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 TNFAIP1Q13829 316 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 GPATCH3Q96I76 525 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 ZBED3Q96IU2 234 aaPredicted RBP13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 PRMT6Q96LA8 375 aaPredicted RBP13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 VEZTQ9HBM0 779 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
CYB561A3-218ENST00000542411 IGSF3O75054 1194 aa13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 PRDX5P30044 214 aa13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 TNNI2P48788 182 aa13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 C2orf69Q8N8R5 385 aa13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 GCC1Q96CN9 775 aa13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 ZDHHC15Q96MV8 337 aa13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 ABT1Q9ULW3 272 aaKnown RBP13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 ASTN2O75129 1339 aaPredicted RBP13.86□□□□□ -0.19
CYB561A3-218ENST00000542411 CLRN2A0PK11 232 aa13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 MCAMP43121 646 aa13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 GRIK5Q16478 980 aa13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 TDRD3Q9H7E2 651 aaKnown RBP13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 TSHZ2Q9NRE2 1034 aa13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 TLR7Q9NYK1 1049 aaKnown RBP13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 ZNF70Q9UC06 446 aaPredicted RBP13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 PPP2R3BQ9Y5P8 575 aa13.85□□□□□ -0.19
CYB561A3-218ENST00000542411 A0A1B0GUL6 1792 aa13.84□□□□□ -0.19
CYB561A3-218ENST00000542411 TTF1Q15361 905 aaPredicted RBP13.84□□□□□ -0.19
CYB561A3-218ENST00000542411 SUPT20HL1Q3ZLR7 823 aa13.84□□□□□ -0.19
CYB561A3-218ENST00000542411 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
CYB561A3-218ENST00000542411 TBC1D9Q6ZT07 1266 aa13.84□□□□□ -0.19
CYB561A3-218ENST00000542411 DEFB129Q9H1M3 183 aa13.84□□□□□ -0.19
CYB561A3-218ENST00000542411 SMARCA5O60264 1052 aaPredicted RBP13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 ZAP70P43403 619 aa13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 TTLL12Q14166 644 aaPredicted RBP13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 ANKRD45Q5TZF3 282 aa13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 PI16Q6UXB8 463 aa13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 CDCA5Q96FF9 252 aa13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 GBA2Q9HCG7 927 aaPredicted RBP13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 PCDHAC2Q9Y5I4 1007 aa13.83□□□□□ -0.2
CYB561A3-218ENST00000542411 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 IDH1O75874 414 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 BAG3O95817 575 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 FKBP1BP68106 108 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 MECOMQ03112 1051 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 FMR1Q06787 632 aaKnown RBP eCLIP13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 MAP3K12Q12852 859 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 RASA3Q14644 834 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 DEFB115Q30KQ5 88 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 FKBP1CQ5VVH2 108 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 CST9Q5W186 159 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 NAA16Q6N069 864 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 APOBEC3HQ6NTF7 200 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 TMED8Q6PL24 325 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 DAGLAQ9Y4D2 1042 aa13.82□□□□□ -0.2
CYB561A3-218ENST00000542411 PSME4Q14997 1843 aa13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 PPP1R12BO60237 982 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 CYP2E1P05181 493 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 ATP5JP18859 108 aa13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 HTRA3P83110 453 aa13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 ARMC9Q7Z3E5 817 aa13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 HOOK2Q96ED9 719 aa13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 DNAJC2Q99543 621 aaKnown RBP13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 ECHDC1Q9NTX5 307 aa13.81□□□□□ -0.2
CYB561A3-218ENST00000542411 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-218ENST00000542411 ERC2O15083 957 aa13.8□□□□□ -0.2
CYB561A3-218ENST00000542411 IGHDP01880 384 aa13.8□□□□□ -0.2
CYB561A3-218ENST00000542411 PLCG2P16885 1265 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms