RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 PAG1Q9NWQ8 432 aa25.53■■□□□ 1.68
MSRB3-211ENST00000541897 MKRN1Q9UHC7 482 aaKnown RBP25.53■■□□□ 1.68
MSRB3-211ENST00000541897 EPHX2P34913 555 aa25.52■■□□□ 1.68
MSRB3-211ENST00000541897 JAG2Q9Y219 1238 aa25.52■■□□□ 1.68
MSRB3-211ENST00000541897 CLEC11AQ9Y240 323 aa25.52■■□□□ 1.68
MSRB3-211ENST00000541897 GJA3Q9Y6H8 435 aa25.52■■□□□ 1.68
MSRB3-211ENST00000541897 HSPA1AP0DMV8 641 aaKnown RBP25.51■■□□□ 1.67
MSRB3-211ENST00000541897 HSPA1BP0DMV9 641 aaKnown RBP25.51■■□□□ 1.67
MSRB3-211ENST00000541897 TICAM2Q86XR7 235 aa25.51■■□□□ 1.67
MSRB3-211ENST00000541897 DNAJC2Q99543 621 aaKnown RBP25.51■■□□□ 1.67
MSRB3-211ENST00000541897 MRIQ9BWK5 157 aa25.51■■□□□ 1.67
MSRB3-211ENST00000541897 MAST3O60307 1309 aa25.51■■□□□ 1.67
MSRB3-211ENST00000541897 PASKQ96RG2 1323 aa25.51■■□□□ 1.67
MSRB3-211ENST00000541897 ADAMTSL1Q8N6G6 1762 aa25.51■■□□□ 1.67
MSRB3-211ENST00000541897 LDHBP07195 334 aaKnown RBP25.5■■□□□ 1.67
MSRB3-211ENST00000541897 GMPSP49915 693 aaPredicted RBP25.5■■□□□ 1.67
MSRB3-211ENST00000541897 MXD3Q9BW11 206 aa25.5■■□□□ 1.67
MSRB3-211ENST00000541897 ZBTB12Q9Y330 459 aaPredicted RBP25.5■■□□□ 1.67
MSRB3-211ENST00000541897 GOLIM4O00461 696 aa25.49■■□□□ 1.67
MSRB3-211ENST00000541897 ITGBL1O95965 494 aaPredicted RBP25.49■■□□□ 1.67
MSRB3-211ENST00000541897 PRDX5P30044 214 aa25.49■■□□□ 1.67
MSRB3-211ENST00000541897 HDLBPQ00341 1268 aaKnown RBP25.49■■□□□ 1.67
MSRB3-211ENST00000541897 ERICH6Q7L0X2 663 aa25.49■■□□□ 1.67
MSRB3-211ENST00000541897 ABCF2Q9UG63 623 aa25.49■■□□□ 1.67
MSRB3-211ENST00000541897 NDUFB9Q9Y6M9 179 aa25.49■■□□□ 1.67
MSRB3-211ENST00000541897 USP17L8P0C7I0 530 aa25.48■■□□□ 1.67
MSRB3-211ENST00000541897 SCNN1DP51172 638 aa25.48■■□□□ 1.67
MSRB3-211ENST00000541897 TTC22Q5TAA0 569 aa25.48■■□□□ 1.67
MSRB3-211ENST00000541897 TBC1D9Q6ZT07 1266 aa25.48■■□□□ 1.67
MSRB3-211ENST00000541897 ANTXR1Q9H6X2 564 aa25.48■■□□□ 1.67
MSRB3-211ENST00000541897 PIH1D3Q9NQM4 214 aaKnown RBP25.48■■□□□ 1.67
MSRB3-211ENST00000541897 GPRC5DQ9NZD1 345 aa25.48■■□□□ 1.67
MSRB3-211ENST00000541897 LRP2BPQ9P2M1 347 aa25.48■■□□□ 1.67
MSRB3-211ENST00000541897 DOCK2Q92608 1830 aa25.47■■□□□ 1.67
MSRB3-211ENST00000541897 ZNF280AP59817 542 aaPredicted RBP25.47■■□□□ 1.67
MSRB3-211ENST00000541897 KIAA0825Q8IV33 1275 aa25.47■■□□□ 1.67
MSRB3-211ENST00000541897 OGFOD1Q8N543 542 aa25.47■■□□□ 1.67
MSRB3-211ENST00000541897 KBTBD3Q8NAB2 608 aa25.47■■□□□ 1.67
MSRB3-211ENST00000541897 EVI5LQ96CN4 794 aa25.47■■□□□ 1.67
MSRB3-211ENST00000541897 HDAC9Q9UKV0 1011 aa25.47■■□□□ 1.67
MSRB3-211ENST00000541897 MAP3K12Q12852 859 aa25.46■■□□□ 1.67
MSRB3-211ENST00000541897 GRIK5Q16478 980 aa25.46■■□□□ 1.67
MSRB3-211ENST00000541897 MAP1SQ66K74 1059 aaPredicted RBP25.46■■□□□ 1.67
MSRB3-211ENST00000541897 CNOT7Q9UIV1 285 aaKnown RBP25.46■■□□□ 1.67
MSRB3-211ENST00000541897 SERPINA10Q9UK55 444 aa25.46■■□□□ 1.67
MSRB3-211ENST00000541897 TTF2Q9UNY4 1162 aaKnown RBP25.46■■□□□ 1.67
MSRB3-211ENST00000541897 LMOD1P29536 600 aaPredicted RBP25.45■■□□□ 1.66
MSRB3-211ENST00000541897 PNMA8AQ86V59 439 aaPredicted RBP25.45■■□□□ 1.66
MSRB3-211ENST00000541897 SLF2Q8IX21 1173 aa25.45■■□□□ 1.66
MSRB3-211ENST00000541897 CNTROBQ8N137 903 aa25.45■■□□□ 1.66
MSRB3-211ENST00000541897 NSUN4Q96CB9 384 aaKnown RBP25.45■■□□□ 1.66
MSRB3-211ENST00000541897 EDC3Q96F86 508 aaKnown RBP25.45■■□□□ 1.66
MSRB3-211ENST00000541897 MAST2Q6P0Q8 1798 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 H7C1D1 291 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 GSTO1P78417 241 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 MECOMQ03112 1051 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 LRRFIP1Q32MZ4 808 aaKnown RBP25.44■■□□□ 1.66
MSRB3-211ENST00000541897 ZSCAN25Q6NSZ9 544 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 HHIPL2Q6UWX4 724 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 DZIP1Q86YF9 867 aaKnown RBP25.44■■□□□ 1.66
MSRB3-211ENST00000541897 MICALL2Q8IY33 904 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 TNS4Q8IZW8 715 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 MTMR14Q8NCE2 650 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 FAM163AQ96GL9 167 aaPredicted RBP25.44■■□□□ 1.66
MSRB3-211ENST00000541897 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.44■■□□□ 1.66
MSRB3-211ENST00000541897 RAI14Q9P0K7 980 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 RFX7Q2KHR2 1363 aa25.44■■□□□ 1.66
MSRB3-211ENST00000541897 IDH1O75874 414 aaKnown RBP25.43■■□□□ 1.66
MSRB3-211ENST00000541897 GSPT1P15170 499 aaKnown RBP25.43■■□□□ 1.66
MSRB3-211ENST00000541897 RGS3P49796 1198 aa25.43■■□□□ 1.66
MSRB3-211ENST00000541897 TMEM88BA6NKF7 163 aa25.42■■□□□ 1.66
MSRB3-211ENST00000541897 F8W031 263 aaPredicted RBP25.42■■□□□ 1.66
MSRB3-211ENST00000541897 CAPN15O75808 1086 aa25.42■■□□□ 1.66
MSRB3-211ENST00000541897 SKAP1Q86WV1 359 aa25.42■■□□□ 1.66
MSRB3-211ENST00000541897 CNTNAP1P78357 1384 aa25.42■■□□□ 1.66
MSRB3-211ENST00000541897 MAP4K4O95819 1239 aaPredicted RBP25.41■■□□□ 1.66
MSRB3-211ENST00000541897 LDHCP07864 332 aa25.41■■□□□ 1.66
MSRB3-211ENST00000541897 ZFYP08048 801 aaPredicted RBP25.41■■□□□ 1.66
MSRB3-211ENST00000541897 EPS15P42566 896 aa25.41■■□□□ 1.66
MSRB3-211ENST00000541897 BMP2KLQ5H9B9 411 aa25.41■■□□□ 1.66
MSRB3-211ENST00000541897 ZNF384Q8TF68 577 aa25.41■■□□□ 1.66
MSRB3-211ENST00000541897 TEKT1Q969V4 418 aa25.41■■□□□ 1.66
MSRB3-211ENST00000541897 MYOZ2Q9NPC6 264 aa25.41■■□□□ 1.66
MSRB3-211ENST00000541897 ADARB2Q9NS39 739 aaKnown RBP25.41■■□□□ 1.66
MSRB3-211ENST00000541897 GAKO14976 1311 aa25.4■■□□□ 1.66
MSRB3-211ENST00000541897 TRIM6-TRIM34B2RNG4 842 aa25.4■■□□□ 1.66
MSRB3-211ENST00000541897 CRKP46108 304 aa25.4■■□□□ 1.66
MSRB3-211ENST00000541897 UBE3CQ15386 1083 aa25.4■■□□□ 1.66
MSRB3-211ENST00000541897 NAA16Q6N069 864 aaPredicted RBP25.4■■□□□ 1.66
MSRB3-211ENST00000541897 ZDHHC15Q96MV8 337 aa25.4■■□□□ 1.66
MSRB3-211ENST00000541897 ADD2P35612 726 aa25.39■■□□□ 1.66
MSRB3-211ENST00000541897 SLC9C2Q5TAH2 1124 aa25.39■■□□□ 1.66
MSRB3-211ENST00000541897 ZBED3Q96IU2 234 aaPredicted RBP25.39■■□□□ 1.66
MSRB3-211ENST00000541897 FSD1Q9BTV5 496 aa25.39■■□□□ 1.66
MSRB3-211ENST00000541897 MROH7-TTC4A0A0A0MT08 1334 aa25.38■■□□□ 1.65
MSRB3-211ENST00000541897 PDE6AP16499 860 aa25.38■■□□□ 1.65
MSRB3-211ENST00000541897 SDSP20132 328 aa25.38■■□□□ 1.65
MSRB3-211ENST00000541897 VEGFBP49765 207 aa25.38■■□□□ 1.65
MSRB3-211ENST00000541897 USP50Q70EL3 339 aaPredicted RBP25.38■■□□□ 1.65
MSRB3-211ENST00000541897 CERS3Q8IU89 383 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms