RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 FGFR2P21802 821 aa17.53■□□□□ 0.4
SUDS3-203ENST00000541591 MMP14P50281 582 aa17.53■□□□□ 0.4
SUDS3-203ENST00000541591 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
SUDS3-203ENST00000541591 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
SUDS3-203ENST00000541591 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
SUDS3-203ENST00000541591 SAGE1Q9NXZ1 904 aa17.53■□□□□ 0.4
SUDS3-203ENST00000541591 IFIT1P09914 478 aaKnown RBP17.52■□□□□ 0.4
SUDS3-203ENST00000541591 SLC5A1P13866 664 aa17.52■□□□□ 0.4
SUDS3-203ENST00000541591 CLUAP1Q96AJ1 413 aa17.52■□□□□ 0.4
SUDS3-203ENST00000541591 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
SUDS3-203ENST00000541591 R3HDMLQ9H3Y0 253 aa17.52■□□□□ 0.4
SUDS3-203ENST00000541591 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
SUDS3-203ENST00000541591 ADORA1P30542 326 aa17.51■□□□□ 0.39
SUDS3-203ENST00000541591 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
SUDS3-203ENST00000541591 LDLRAD1Q5T700 205 aa17.51■□□□□ 0.39
SUDS3-203ENST00000541591 SPRYD7Q5W111 196 aa17.51■□□□□ 0.39
SUDS3-203ENST00000541591 SERPINA10Q9UK55 444 aa17.51■□□□□ 0.39
SUDS3-203ENST00000541591 ATAD5Q96QE3 1844 aa17.5■□□□□ 0.39
SUDS3-203ENST00000541591 USP2O75604 605 aaPredicted RBP17.5■□□□□ 0.39
SUDS3-203ENST00000541591 GJA5P36382 358 aa17.5■□□□□ 0.39
SUDS3-203ENST00000541591 ATP2B3Q16720 1220 aa17.5■□□□□ 0.39
SUDS3-203ENST00000541591 WNK4Q96J92 1243 aa17.5■□□□□ 0.39
SUDS3-203ENST00000541591 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
SUDS3-203ENST00000541591 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
SUDS3-203ENST00000541591 TRIM27P14373 513 aa17.49■□□□□ 0.39
SUDS3-203ENST00000541591 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
SUDS3-203ENST00000541591 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
SUDS3-203ENST00000541591 SLC10A4Q96EP9 437 aa17.49■□□□□ 0.39
SUDS3-203ENST00000541591 PPP2R3BQ9Y5P8 575 aa17.49■□□□□ 0.39
SUDS3-203ENST00000541591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.49■□□□□ 0.39
SUDS3-203ENST00000541591 PPP1R12BO60237 982 aaPredicted RBP17.48■□□□□ 0.39
SUDS3-203ENST00000541591 PHKA1P46020 1223 aa17.48■□□□□ 0.39
SUDS3-203ENST00000541591 DIXDC1Q155Q3 683 aa17.48■□□□□ 0.39
SUDS3-203ENST00000541591 LPIN2Q92539 896 aa17.48■□□□□ 0.39
SUDS3-203ENST00000541591 TEKT1Q969V4 418 aa17.48■□□□□ 0.39
SUDS3-203ENST00000541591 TEPSINQ96N21 525 aa17.48■□□□□ 0.39
SUDS3-203ENST00000541591 PTPRFP10586 1907 aa17.47■□□□□ 0.39
SUDS3-203ENST00000541591 SUPT20HL1Q3ZLR7 823 aa17.47■□□□□ 0.39
SUDS3-203ENST00000541591 INTS3Q68E01 1043 aaKnown RBP17.47■□□□□ 0.39
SUDS3-203ENST00000541591 TBC1D22AQ8WUA7 517 aa17.47■□□□□ 0.39
SUDS3-203ENST00000541591 ZNF296Q8WUU4 475 aaPredicted RBP17.47■□□□□ 0.39
SUDS3-203ENST00000541591 CEP126Q9P2H0 1117 aa17.47■□□□□ 0.39
SUDS3-203ENST00000541591 TNRC18O15417 2968 aaPredicted RBP17.46■□□□□ 0.39
SUDS3-203ENST00000541591 SRGAP3O43295 1099 aa17.46■□□□□ 0.39
SUDS3-203ENST00000541591 PRDX5P30044 214 aa17.46■□□□□ 0.39
SUDS3-203ENST00000541591 IREB2P48200 963 aaKnown RBP17.46■□□□□ 0.39
SUDS3-203ENST00000541591 TM4SF4P48230 202 aa17.46■□□□□ 0.39
SUDS3-203ENST00000541591 SREBF2Q12772 1141 aa17.46■□□□□ 0.39
SUDS3-203ENST00000541591 TNFAIP1Q13829 316 aa17.46■□□□□ 0.39
SUDS3-203ENST00000541591 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
SUDS3-203ENST00000541591 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
SUDS3-203ENST00000541591 IGF2BP3O00425 579 aaKnown RBP eCLIP17.45■□□□□ 0.38
SUDS3-203ENST00000541591 CIAO1O76071 339 aa17.45■□□□□ 0.38
SUDS3-203ENST00000541591 SOX10P56693 466 aa17.45■□□□□ 0.38
SUDS3-203ENST00000541591 TIMM10P62072 90 aa17.45■□□□□ 0.38
SUDS3-203ENST00000541591 TFCP2Q12800 502 aa17.45■□□□□ 0.38
SUDS3-203ENST00000541591 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
SUDS3-203ENST00000541591 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
SUDS3-203ENST00000541591 TMEM57Q8N5G2 664 aa17.45■□□□□ 0.38
SUDS3-203ENST00000541591 DOCK1Q14185 1865 aa17.45■□□□□ 0.38
SUDS3-203ENST00000541591 PHIPQ8WWQ0 1821 aa17.44■□□□□ 0.38
SUDS3-203ENST00000541591 IL15P40933 162 aaPredicted RBP17.44■□□□□ 0.38
SUDS3-203ENST00000541591 TNNI2P48788 182 aa17.44■□□□□ 0.38
SUDS3-203ENST00000541591 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
SUDS3-203ENST00000541591 CTU1Q7Z7A3 348 aaKnown RBP17.44■□□□□ 0.38
SUDS3-203ENST00000541591 OPTNQ96CV9 577 aa17.44■□□□□ 0.38
SUDS3-203ENST00000541591 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
SUDS3-203ENST00000541591 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
SUDS3-203ENST00000541591 DAGLAQ9Y4D2 1042 aa17.44■□□□□ 0.38
SUDS3-203ENST00000541591 FOCADQ5VW36 1801 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 PNMA6EA0A0J9YXQ4 647 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 GPR25O00155 361 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 TCP10Q12799 353 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 VGLL4Q14135 290 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.43■□□□□ 0.38
SUDS3-203ENST00000541591 IFNL1Q8IU54 200 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 ANKRD13AQ8IZ07 590 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 ZDHHC15Q96MV8 337 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 TMOD2Q9NZR1 351 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 MGAMO43451 1857 aa17.43■□□□□ 0.38
SUDS3-203ENST00000541591 MANSC4A6NHS7 340 aaPredicted RBP17.42■□□□□ 0.38
SUDS3-203ENST00000541591 GNAI3P08754 354 aa17.42■□□□□ 0.38
SUDS3-203ENST00000541591 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
SUDS3-203ENST00000541591 CCDC102BQ68D86 513 aa17.42■□□□□ 0.38
SUDS3-203ENST00000541591 WDR66Q8TBY9 1149 aa17.42■□□□□ 0.38
SUDS3-203ENST00000541591 MAST3O60307 1309 aa17.42■□□□□ 0.38
SUDS3-203ENST00000541591 A0A1B0GUL7 405 aa17.41■□□□□ 0.38
SUDS3-203ENST00000541591 ZBTB48P10074 688 aaPredicted RBP17.41■□□□□ 0.38
SUDS3-203ENST00000541591 NFIAQ12857 509 aa17.41■□□□□ 0.38
SUDS3-203ENST00000541591 MIGA2Q7L4E1 593 aa17.41■□□□□ 0.38
SUDS3-203ENST00000541591 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
SUDS3-203ENST00000541591 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
SUDS3-203ENST00000541591 SIPA1L1O43166 1804 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
SUDS3-203ENST00000541591 LDHBP07195 334 aaKnown RBP17.4■□□□□ 0.38
SUDS3-203ENST00000541591 RASGRF1Q13972 1273 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 CDC42EP5Q6NZY7 148 aa17.4■□□□□ 0.38
SUDS3-203ENST00000541591 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms