RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
LMO3-226ENST00000541589 NUP98P52948 1817 aa10.05□□□□□ -0.8
LMO3-226ENST00000541589 TBC1D10BQ4KMP7 808 aaPredicted RBP10.04□□□□□ -0.8
LMO3-226ENST00000541589 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 HDAC9Q9UKV0 1011 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 DUOX1Q9NRD9 1551 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 PSMD14O00487 310 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 MYL6BP14649 208 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 PBX2P40425 430 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
LMO3-226ENST00000541589 BMP2KLQ5H9B9 411 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 GIGYF2Q6Y7W6 1299 aaKnown RBP10.04□□□□□ -0.8
LMO3-226ENST00000541589 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 XAGE3Q8WTP9 111 aa10.04□□□□□ -0.8
LMO3-226ENST00000541589 DCPSQ96C86 337 aaKnown RBP10.04□□□□□ -0.8
LMO3-226ENST00000541589 HTTP42858 3142 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 EVI5O60447 810 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 TBC1D8O95759 1140 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 RPS12P25398 132 aaKnown RBP10.03□□□□□ -0.8
LMO3-226ENST00000541589 NEXNQ0ZGT2 675 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 COPS6Q7L5N1 327 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 PPP1R42Q7Z4L9 355 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 SSH3Q8TE77 659 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 CDCA5Q96FF9 252 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
LMO3-226ENST00000541589 ZBTB3Q9H5J0 574 aa10.03□□□□□ -0.8
LMO3-226ENST00000541589 UTYO14607 1347 aa10.02□□□□□ -0.8
LMO3-226ENST00000541589 POLR2AP24928 1970 aaKnown RBP10.02□□□□□ -0.81
LMO3-226ENST00000541589 PNMA6EA0A0J9YXQ4 647 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 GPR25O00155 361 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
LMO3-226ENST00000541589 FKBP1BP68106 108 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 LSM11P83369 360 aaKnown RBP eCLIP10.02□□□□□ -0.81
LMO3-226ENST00000541589 PARP10Q53GL7 1025 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 KIF6Q6ZMV9 814 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 ANKRD13DQ6ZTN6 518 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 METTL22Q9BUU2 404 aaPredicted RBP10.02□□□□□ -0.81
LMO3-226ENST00000541589 CFHR5Q9BXR6 569 aa10.02□□□□□ -0.81
LMO3-226ENST00000541589 C9orf78Q9NZ63 289 aaPredicted RBP10.02□□□□□ -0.81
LMO3-226ENST00000541589 RTL9Q8NET4 1388 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 GRM8O00222 908 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 TM4SF4P48230 202 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 MTX1Q13505 466 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 GRAPQ13588 217 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 PLBD2Q8NHP8 589 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 GRAPLQ8TC17 118 aaPredicted RBP10.01□□□□□ -0.81
LMO3-226ENST00000541589 DDRGK1Q96HY6 314 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
LMO3-226ENST00000541589 GGA3Q9NZ52 723 aa10.01□□□□□ -0.81
LMO3-226ENST00000541589 ASTN2O75129 1339 aaPredicted RBP10.01□□□□□ -0.81
LMO3-226ENST00000541589 RAB11FIP3O75154 756 aa10□□□□□ -0.81
LMO3-226ENST00000541589 IGKV5-2P06315 115 aa10□□□□□ -0.81
LMO3-226ENST00000541589 CWF19L2Q2TBE0 894 aaKnown RBP10□□□□□ -0.81
LMO3-226ENST00000541589 KIF4BQ2VIQ3 1234 aa10□□□□□ -0.81
LMO3-226ENST00000541589 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
LMO3-226ENST00000541589 UTP14AQ9BVJ6 771 aaKnown RBP10□□□□□ -0.81
LMO3-226ENST00000541589 LRRCC1Q9C099 1032 aa10□□□□□ -0.81
LMO3-226ENST00000541589 KCNQ5Q9NR82 932 aa10□□□□□ -0.81
LMO3-226ENST00000541589 BRCA2P51587 3418 aa10□□□□□ -0.81
LMO3-226ENST00000541589 SZT2Q5T011 3432 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 NEURL1BA8MQ27 555 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 SRGAP3O43295 1099 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 SMARCA5O60264 1052 aaPredicted RBP9.99□□□□□ -0.81
LMO3-226ENST00000541589 GCKRQ14397 625 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 WASHC4Q2M389 1173 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 HSP90AB4PQ58FF6 505 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 TMC4Q7Z404 712 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 MYD88Q99836 296 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 DBNDD1Q9H9R9 158 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 EXOC6BQ9Y2D4 811 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 PAPPA2Q9BXP8 1791 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
LMO3-226ENST00000541589 ANKRD36CQ5JPF3 1778 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 APBB1O00213 710 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 FKTNO75072 461 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 VIL1P09327 827 aaKnown RBP9.98□□□□□ -0.81
LMO3-226ENST00000541589 FOSBP53539 338 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 TTC22Q5TAA0 569 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 DDX46Q7L014 1031 aaKnown RBP9.98□□□□□ -0.81
LMO3-226ENST00000541589 R3HDMLQ9H3Y0 253 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 OSBPL3Q9H4L5 887 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 CENPFP49454 3210 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 LAMB2P55268 1798 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 ZNF609O15014 1411 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 ECE2O60344 883 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 EIF5BO60841 1220 aaKnown RBP9.98□□□□□ -0.81
LMO3-226ENST00000541589 HCLS1P14317 486 aaPredicted RBP9.98□□□□□ -0.81
LMO3-226ENST00000541589 ZNF280AP59817 542 aaPredicted RBP9.98□□□□□ -0.81
LMO3-226ENST00000541589 MOB2Q70IA6 237 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 SUCLG2Q96I99 432 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 POLLQ9UGP5 575 aa9.98□□□□□ -0.81
LMO3-226ENST00000541589 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
LMO3-226ENST00000541589 SALL3Q9BXA9 1300 aa9.97□□□□□ -0.81
LMO3-226ENST00000541589 CDC45O75419 566 aa9.97□□□□□ -0.81
LMO3-226ENST00000541589 SURF6O75683 361 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms