RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 PDE12Q6L8Q7 609 aaKnown RBP9.66□□□□□ -0.86
TTR-203ENST00000541025 MAP4K3Q8IVH8 894 aa9.66□□□□□ -0.86
TTR-203ENST00000541025 IL22RA1Q8N6P7 574 aa9.66□□□□□ -0.86
TTR-203ENST00000541025 WFDC12Q8WWY7 111 aa9.66□□□□□ -0.86
TTR-203ENST00000541025 ZNF142P52746 1687 aaPredicted RBP9.66□□□□□ -0.86
TTR-203ENST00000541025 ABCC3O15438 1527 aa9.66□□□□□ -0.86
TTR-203ENST00000541025 FAM135AQ9P2D6 1515 aa9.66□□□□□ -0.86
TTR-203ENST00000541025 STRCQ7RTU9 1775 aa9.65□□□□□ -0.86
TTR-203ENST00000541025 DLL1O00548 723 aa9.65□□□□□ -0.86
TTR-203ENST00000541025 SSBP4Q9BWG4 385 aaPredicted RBP9.65□□□□□ -0.86
TTR-203ENST00000541025 RRP7BPQ9NSQ0 103 aa9.65□□□□□ -0.86
TTR-203ENST00000541025 ABI2Q9NYB9 513 aaPredicted RBP9.65□□□□□ -0.86
TTR-203ENST00000541025 ERBINQ96RT1 1412 aa9.65□□□□□ -0.87
TTR-203ENST00000541025 RRBP1Q9P2E9 1410 aaKnown RBP9.65□□□□□ -0.87
TTR-203ENST00000541025 ZMYM3Q14202 1370 aa9.64□□□□□ -0.87
TTR-203ENST00000541025 SCNN1AP37088 669 aa9.64□□□□□ -0.87
TTR-203ENST00000541025 GCC2Q8IWJ2 1684 aa9.64□□□□□ -0.87
TTR-203ENST00000541025 ANKRD30AQ9BXX3 1397 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 SSFA2P28290 1259 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 XKR5Q6UX68 686 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 TMEM130Q8N3G9 435 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 Q8N3U1 123 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 HELQQ8TDG4 1101 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 TP53INP1Q96A56 240 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
TTR-203ENST00000541025 UNC13BO14795 1591 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 VWDEQ8N2E2 1590 aa9.63□□□□□ -0.87
TTR-203ENST00000541025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
TTR-203ENST00000541025 TMEM88BA6NKF7 163 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 KIF4AO95239 1232 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 PCSK2P16519 638 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
TTR-203ENST00000541025 NOM1Q5C9Z4 860 aaKnown RBP9.62□□□□□ -0.87
TTR-203ENST00000541025 ZMYM1Q5SVZ6 1142 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 XP32Q5T750 250 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
TTR-203ENST00000541025 ARID3AQ99856 593 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 ELP3Q9H9T3 547 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 TRIM33Q9UPN9 1127 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 PPME1Q9Y570 386 aa9.62□□□□□ -0.87
TTR-203ENST00000541025 PZPP20742 1482 aa9.61□□□□□ -0.87
TTR-203ENST00000541025 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
TTR-203ENST00000541025 NOS3P29474 1203 aa9.61□□□□□ -0.87
TTR-203ENST00000541025 HSPA2P54652 639 aa9.61□□□□□ -0.87
TTR-203ENST00000541025 SETDB1Q15047 1291 aa9.61□□□□□ -0.87
TTR-203ENST00000541025 MRPL18Q9H0U6 180 aaKnown RBP9.61□□□□□ -0.87
TTR-203ENST00000541025 NPATQ14207 1427 aa9.61□□□□□ -0.87
TTR-203ENST00000541025 CEP170BQ9Y4F5 1589 aaPredicted RBP9.61□□□□□ -0.87
TTR-203ENST00000541025 UHRF1BP1Q6BDS2 1440 aa9.6□□□□□ -0.87
TTR-203ENST00000541025 ITGAEP38570 1179 aa9.6□□□□□ -0.87
TTR-203ENST00000541025 PRSS36Q5K4E3 855 aa9.6□□□□□ -0.87
TTR-203ENST00000541025 CEP135Q66GS9 1140 aa9.6□□□□□ -0.87
TTR-203ENST00000541025 ALKBH2Q6NS38 261 aa9.6□□□□□ -0.87
TTR-203ENST00000541025 TTC16Q8NEE8 873 aa9.6□□□□□ -0.87
TTR-203ENST00000541025 GTF3C2Q8WUA4 911 aaPredicted RBP9.6□□□□□ -0.87
TTR-203ENST00000541025 POLR1AO95602 1720 aaPredicted RBP9.59□□□□□ -0.87
TTR-203ENST00000541025 WASHC2CQ9Y4E1 1318 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 SPATA31D1Q6ZQQ2 1576 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 ANKRD50Q9ULJ7 1429 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 TET3O43151 1660 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 ZNF438Q7Z4V0 828 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 ATCAYQ86WG3 371 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 EDEM1Q92611 657 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 AKTIPQ9H8T0 292 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 MTMR7Q9Y216 660 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 ROCK1Q13464 1354 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 IQGAP3Q86VI3 1631 aa9.59□□□□□ -0.87
TTR-203ENST00000541025 MYO5BQ9ULV0 1848 aa9.59□□□□□ -0.88
TTR-203ENST00000541025 E9PCH4 1651 aa9.58□□□□□ -0.88
TTR-203ENST00000541025 EFCAB6Q5THR3 1501 aa9.58□□□□□ -0.88
TTR-203ENST00000541025 MZF1P28698 734 aaPredicted RBP9.58□□□□□ -0.88
TTR-203ENST00000541025 CDC27P30260 824 aa9.58□□□□□ -0.88
TTR-203ENST00000541025 NCAPG2Q86XI2 1143 aa9.58□□□□□ -0.88
TTR-203ENST00000541025 CEP120Q8N960 986 aa9.58□□□□□ -0.88
TTR-203ENST00000541025 PMEPA1Q969W9 287 aa9.58□□□□□ -0.88
TTR-203ENST00000541025 PBX4Q9BYU1 374 aa9.58□□□□□ -0.88
TTR-203ENST00000541025 LMTK2Q8IWU2 1503 aa9.57□□□□□ -0.88
TTR-203ENST00000541025 UBR1Q8IWV7 1749 aa9.57□□□□□ -0.88
TTR-203ENST00000541025 CYP2E1P05181 493 aaPredicted RBP9.57□□□□□ -0.88
TTR-203ENST00000541025 DNM1Q05193 864 aaKnown RBP9.57□□□□□ -0.88
TTR-203ENST00000541025 HOMEZQ8IX15 550 aa9.57□□□□□ -0.88
TTR-203ENST00000541025 RASSF4Q9H2L5 321 aa9.57□□□□□ -0.88
TTR-203ENST00000541025 TMEM63CQ9P1W3 806 aa9.57□□□□□ -0.88
TTR-203ENST00000541025 ERVK-7P63135 1459 aa9.57□□□□□ -0.88
TTR-203ENST00000541025 SYNMO15061 1565 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 F8W735 103 aaPredicted RBP9.56□□□□□ -0.88
TTR-203ENST00000541025 PDGFAP04085 211 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 NPR3P17342 541 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 EIF1AXP47813 144 aaKnown RBP9.56□□□□□ -0.88
TTR-203ENST00000541025 ATP11AP98196 1134 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 DZIP1LQ8IYY4 767 aaKnown RBP9.56□□□□□ -0.88
TTR-203ENST00000541025 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 SALL4Q9UJQ4 1053 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 PIK3C2BO00750 1634 aa9.56□□□□□ -0.88
TTR-203ENST00000541025 A2ML1A8K2U0 1454 aa9.55□□□□□ -0.88
TTR-203ENST00000541025 LINC01387J3KSC0 135 aa9.55□□□□□ -0.88
TTR-203ENST00000541025 MPSTP25325 297 aa9.55□□□□□ -0.88
TTR-203ENST00000541025 MEGF10Q96KG7 1140 aa9.55□□□□□ -0.88
TTR-203ENST00000541025 LACRTQ9GZZ8 138 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms