RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 AKAP2Q9Y2D5 859 aa10.84□□□□□ -0.67
YBX3-210ENST00000540975 DLGAP3O95886 979 aa10.83□□□□□ -0.68
YBX3-210ENST00000540975 CYP11A1P05108 521 aa10.83□□□□□ -0.68
YBX3-210ENST00000540975 FGD1P98174 961 aa10.83□□□□□ -0.68
YBX3-210ENST00000540975 RSPO4Q2I0M5 234 aaPredicted RBP10.83□□□□□ -0.68
YBX3-210ENST00000540975 C3orf58Q8NDZ4 430 aa10.83□□□□□ -0.68
YBX3-210ENST00000540975 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
YBX3-210ENST00000540975 RNF19AQ9NV58 838 aa10.83□□□□□ -0.68
YBX3-210ENST00000540975 GSTT1P30711 240 aa10.82□□□□□ -0.68
YBX3-210ENST00000540975 EXOSC6Q5RKV6 272 aaKnown RBP10.82□□□□□ -0.68
YBX3-210ENST00000540975 TRIM56Q9BRZ2 755 aaKnown RBP10.82□□□□□ -0.68
YBX3-210ENST00000540975 MAOBP27338 520 aa10.81□□□□□ -0.68
YBX3-210ENST00000540975 POU4F3Q15319 338 aa10.81□□□□□ -0.68
YBX3-210ENST00000540975 DUSP9Q99956 384 aaKnown RBP10.81□□□□□ -0.68
YBX3-210ENST00000540975 TMPRSS13Q9BYE2 586 aa10.81□□□□□ -0.68
YBX3-210ENST00000540975 CEP41Q9BYV8 373 aa10.81□□□□□ -0.68
YBX3-210ENST00000540975 C12orf49Q9H741 205 aa10.81□□□□□ -0.68
YBX3-210ENST00000540975 GNA15P30679 374 aa10.8□□□□□ -0.68
YBX3-210ENST00000540975 FBXO33Q7Z6M2 555 aa10.8□□□□□ -0.68
YBX3-210ENST00000540975 TMEM39AQ9NV64 488 aa10.8□□□□□ -0.68
YBX3-210ENST00000540975 AK5Q9Y6K8 562 aa10.8□□□□□ -0.68
YBX3-210ENST00000540975 H2AFB1P0C5Y9 115 aa10.79□□□□□ -0.68
YBX3-210ENST00000540975 H2AFB2P0C5Z0 115 aa10.79□□□□□ -0.68
YBX3-210ENST00000540975 TMCO4Q5TGY1 634 aa10.79□□□□□ -0.68
YBX3-210ENST00000540975 NUTM2GQ5VZR2 741 aa10.79□□□□□ -0.68
YBX3-210ENST00000540975 FAM8A1Q9UBU6 413 aa10.79□□□□□ -0.68
YBX3-210ENST00000540975 ADAM23O75077 832 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 ECEL1O95672 775 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 CTSBP07858 339 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 AP3B2Q13367 1082 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 ANKRD34AQ69YU3 496 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 CORO1BQ9BR76 489 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 SEMA6BQ9H3T3 888 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 SUGCTQ9HAC7 445 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 PARP2Q9UGN5 583 aa10.78□□□□□ -0.68
YBX3-210ENST00000540975 GPN3Q9UHW5 284 aaPredicted RBP10.78□□□□□ -0.68
YBX3-210ENST00000540975 K7ELQ4 463 aaPredicted RBP10.77□□□□□ -0.69
YBX3-210ENST00000540975 TAGLNQ01995 201 aaKnown RBP10.77□□□□□ -0.69
YBX3-210ENST00000540975 PPP2R3AQ06190 1150 aa10.77□□□□□ -0.69
YBX3-210ENST00000540975 TRIM26Q12899 539 aaPredicted RBP10.77□□□□□ -0.69
YBX3-210ENST00000540975 SMG8Q8ND04 991 aaKnown RBP10.77□□□□□ -0.69
YBX3-210ENST00000540975 FAM46AQ96IP4 442 aaKnown RBP10.77□□□□□ -0.69
YBX3-210ENST00000540975 DYRK3O43781 588 aa10.76□□□□□ -0.69
YBX3-210ENST00000540975 EIF4BP23588 611 aaKnown RBP10.76□□□□□ -0.69
YBX3-210ENST00000540975 FDX2Q6P4F2 183 aa10.76□□□□□ -0.69
YBX3-210ENST00000540975 ARMC10Q8N2F6 343 aa10.76□□□□□ -0.69
YBX3-210ENST00000540975 C12orf50Q8NA57 414 aaPredicted RBP10.76□□□□□ -0.69
YBX3-210ENST00000540975 CYP4F12Q9HCS2 524 aa10.76□□□□□ -0.69
YBX3-210ENST00000540975 PPM1HQ9ULR3 514 aa10.76□□□□□ -0.69
YBX3-210ENST00000540975 SART1O43290 800 aaKnown RBP10.75□□□□□ -0.69
YBX3-210ENST00000540975 USP17L7P0C7H9 530 aa10.75□□□□□ -0.69
YBX3-210ENST00000540975 NECAB3Q96P71 396 aaPredicted RBP10.75□□□□□ -0.69
YBX3-210ENST00000540975 PREPP48147 710 aa10.74□□□□□ -0.69
YBX3-210ENST00000540975 DAB2P98082 770 aa10.74□□□□□ -0.69
YBX3-210ENST00000540975 UVSSAQ2YD98 709 aa10.74□□□□□ -0.69
YBX3-210ENST00000540975 TPTE2Q6XPS3 522 aa10.74□□□□□ -0.69
YBX3-210ENST00000540975 PRR23CQ6ZRP0 262 aa10.74□□□□□ -0.69
YBX3-210ENST00000540975 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
YBX3-210ENST00000540975 CEP44Q9C0F1 390 aa10.74□□□□□ -0.69
YBX3-210ENST00000540975 DRD2P14416 443 aa10.73□□□□□ -0.69
YBX3-210ENST00000540975 XPCQ01831 940 aaPredicted RBP10.73□□□□□ -0.69
YBX3-210ENST00000540975 HP1BP3Q5SSJ5 553 aaPredicted RBP10.73□□□□□ -0.69
YBX3-210ENST00000540975 DHX15O43143 795 aaKnown RBP10.72□□□□□ -0.69
YBX3-210ENST00000540975 TIAF1O95411 115 aa10.72□□□□□ -0.69
YBX3-210ENST00000540975 ARNTP27540 789 aa10.72□□□□□ -0.69
YBX3-210ENST00000540975 STK35Q8TDR2 534 aa10.72□□□□□ -0.69
YBX3-210ENST00000540975 UTP4Q969X6 686 aaKnown RBP10.72□□□□□ -0.69
YBX3-210ENST00000540975 MYRFLQ96LU7 910 aa10.72□□□□□ -0.69
YBX3-210ENST00000540975 ZC3H12CQ9C0D7 883 aaKnown RBP10.72□□□□□ -0.69
YBX3-210ENST00000540975 RAD18Q9NS91 495 aa10.72□□□□□ -0.69
YBX3-210ENST00000540975 ENC1O14682 589 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 FBXO24O75426 580 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 GSTP1P09211 210 aaKnown RBP10.71□□□□□ -0.69
YBX3-210ENST00000540975 NME2P22392 152 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 ITGB7P26010 798 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 SOX4Q06945 474 aaPredicted RBP10.71□□□□□ -0.69
YBX3-210ENST00000540975 PSMD2Q13200 908 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 TMC4Q7Z404 712 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 PDZD3Q86UT5 571 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 FAM161BQ96MY7 647 aa10.71□□□□□ -0.69
YBX3-210ENST00000540975 BMP6P22004 513 aa10.7□□□□□ -0.7
YBX3-210ENST00000540975 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
YBX3-210ENST00000540975 PDE3AQ14432 1141 aa10.7□□□□□ -0.7
YBX3-210ENST00000540975 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
YBX3-210ENST00000540975 SULF2Q8IWU5 870 aa10.7□□□□□ -0.7
YBX3-210ENST00000540975 CCDC86Q9H6F5 360 aaKnown RBP10.7□□□□□ -0.7
YBX3-210ENST00000540975 RAXQ9Y2V3 346 aa10.7□□□□□ -0.7
YBX3-210ENST00000540975 AOC2O75106 756 aa10.69□□□□□ -0.7
YBX3-210ENST00000540975 BMP3P12645 472 aa10.69□□□□□ -0.7
YBX3-210ENST00000540975 LIG1P18858 919 aa10.69□□□□□ -0.7
YBX3-210ENST00000540975 FAM20CQ8IXL6 584 aa10.69□□□□□ -0.7
YBX3-210ENST00000540975 WDR89Q96FK6 387 aaPredicted RBP10.69□□□□□ -0.7
YBX3-210ENST00000540975 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
YBX3-210ENST00000540975 EMILIN2Q9BXX0 1053 aa10.69□□□□□ -0.7
YBX3-210ENST00000540975 STOML1Q9UBI4 398 aa10.69□□□□□ -0.7
YBX3-210ENST00000540975 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
YBX3-210ENST00000540975 PAGE1O75459 146 aa10.68□□□□□ -0.7
YBX3-210ENST00000540975 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
YBX3-210ENST00000540975 PRSS36Q5K4E3 855 aa10.68□□□□□ -0.7
YBX3-210ENST00000540975 C2CD4AQ8NCU7 369 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms