RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TEFQ10587 303 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 TRIM32Q13049 653 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 CRY2Q49AN0 593 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 CDC37L1Q7L3B6 337 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 CTU1Q7Z7A3 348 aaKnown RBP6.22□□□□□ -1.41
SNHG1-214ENST00000540865 NIM1KQ8IY84 436 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 BAP1Q92560 729 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 ZIC5Q96T25 663 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 VPS33BQ9H267 617 aa6.22□□□□□ -1.41
SNHG1-214ENST00000540865 NIP7Q9Y221 180 aaKnown RBP eCLIP6.22□□□□□ -1.414e-44■■■■■ 26.8
SNHG1-214ENST00000540865 HOXA10P31260 410 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-214ENST00000540865 ABL2P42684 1182 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 PKN2Q16513 984 aaKnown RBP6.21□□□□□ -1.42
SNHG1-214ENST00000540865 RGMBQ6NW40 437 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 IL17REQ8NFR9 667 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 ZNF408Q9H9D4 720 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 RNF186Q9NXI6 227 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 FKBPLQ9UIM3 349 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 COG6Q9Y2V7 657 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 NDUFB9Q9Y6M9 179 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 CDHR2Q9BYE9 1310 aa6.21□□□□□ -1.42
SNHG1-214ENST00000540865 NPC1L1Q9UHC9 1359 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 A0A0C4DFX4 3053 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 MKI67P46013 3256 aaKnown RBP6.2□□□□□ -1.42
SNHG1-214ENST00000540865 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 TTC24A2A3L6 582 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-214ENST00000540865 FAM155AB1AL88 458 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-214ENST00000540865 TRPA1O75762 1119 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 HMOX1P09601 288 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 GTF2E1P29083 439 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-214ENST00000540865 GMPSP49915 693 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-214ENST00000540865 SKOR1P84550 965 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 KIF23Q02241 960 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-214ENST00000540865 CXCL9Q07325 125 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 HABP4Q5JVS0 413 aaKnown RBP6.2□□□□□ -1.42
SNHG1-214ENST00000540865 FOXJ1Q92949 421 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 NYXQ9GZU5 481 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 PANK3Q9H999 370 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 ATP13A2Q9NQ11 1180 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 ZNRF3Q9ULT6 936 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 USP16Q9Y5T5 823 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 KIF7Q2M1P5 1343 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 COL4A5P29400 1685 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 SCN7AQ01118 1682 aa6.2□□□□□ -1.42
SNHG1-214ENST00000540865 SCN11AQ9UI33 1791 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 CASP8AP2Q9UKL3 1982 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 FAM177BA6PVY3 158 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 GNAT3A8MTJ3 354 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 TERTO14746 1132 aaKnown RBP6.19□□□□□ -1.42
SNHG1-214ENST00000540865 PPIP5K2O43314 1243 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 HIRAP54198 1017 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-214ENST00000540865 SH3BP2P78314 561 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 TNIP1Q15025 636 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 USP48Q86UV5 1035 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 C2orf69Q8N8R5 385 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 SUPT20HQ8NEM7 779 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 GAS2L2Q8NHY3 880 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 RPGRQ92834 1020 aaKnown RBP6.19□□□□□ -1.42
SNHG1-214ENST00000540865 RBM17Q96I25 401 aaKnown RBP6.19□□□□□ -1.42
SNHG1-214ENST00000540865 CRAMP1Q96RY5 1269 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 POLR3GLQ9BT43 218 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 TMX4Q9H1E5 349 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-214ENST00000540865 TIMELESSQ9UNS1 1208 aa6.19□□□□□ -1.42
SNHG1-214ENST00000540865 ARFGEF2Q9Y6D5 1785 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 BTBD11A6QL63 1104 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 H7C1D1 291 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 CD2BP2O95400 341 aaKnown RBP6.18□□□□□ -1.42
SNHG1-214ENST00000540865 SNRPA1P09661 255 aaKnown RBP6.18□□□□□ -1.42
SNHG1-214ENST00000540865 PIP4K2AP48426 406 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-214ENST00000540865 ZNF157P51786 506 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-214ENST00000540865 IRF5Q13568 498 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 AOC3Q16853 763 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 ZNF511Q8NB15 262 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 TRPM4Q8TD43 1214 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 TRIM47Q96LD4 638 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 CSRNP1Q96S65 589 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 OCSTAMPQ9BR26 566 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 BCL2L13Q9BXK5 485 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 RTFDC1Q9BY42 306 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-214ENST00000540865 GBA2Q9HCG7 927 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-214ENST00000540865 CEMIPQ8WUJ3 1361 aa6.18□□□□□ -1.42
SNHG1-214ENST00000540865 RIC1Q4ADV7 1423 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 ERVV-1B6SEH8 477 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 APBB1O00213 710 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 KCNQ3O43525 872 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
SNHG1-214ENST00000540865 SMPD1P17405 629 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 HLFQ16534 295 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 C4orf48Q5BLP8 95 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 NBPF10Q6P3W6 841 aaKnown RBP6.17□□□□□ -1.42
SNHG1-214ENST00000540865 KRT26Q7Z3Y9 468 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 CNOT7Q9UIV1 285 aaKnown RBP6.17□□□□□ -1.42
SNHG1-214ENST00000540865 KNSTRNQ9Y448 316 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 ATP6V0A2Q9Y487 856 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 ABCC12Q96J65 1359 aa6.17□□□□□ -1.42
SNHG1-214ENST00000540865 SZT2Q5T011 3432 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 BCORQ6W2J9 1755 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 UBR2Q8IWV8 1755 aa6.16□□□□□ -1.42
SNHG1-214ENST00000540865 MAGEB6P1A0A0J9YX57 407 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms