RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 TEPSINQ96N21 525 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 TRIM17Q9Y577 477 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 LAMB1P07942 1786 aa15.11■□□□□ 0.01
CBX3P4-202ENST00000540428 PDE4DIPQ5VU43 2346 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 PDE8BO95263 885 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 METTL24Q5JXM2 366 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 OTOP1Q7RTM1 612 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 ANKRD44Q8N8A2 993 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 VGLL2Q8N8G2 317 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 OPTNQ96CV9 577 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 MRIQ9BWK5 157 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 KIF16BQ96L93 1317 aa15.1■□□□□ 0.01
CBX3P4-202ENST00000540428 CRHR2Q13324 411 aa15.09■□□□□ 0.01
CBX3P4-202ENST00000540428 LRRC24Q50LG9 513 aa15.09■□□□□ 0.01
CBX3P4-202ENST00000540428 INTS3Q68E01 1043 aaKnown RBP15.09■□□□□ 0.01
CBX3P4-202ENST00000540428 PTPN18Q99952 460 aa15.09■□□□□ 0.01
CBX3P4-202ENST00000540428 ELP3Q9H9T3 547 aa15.09■□□□□ 0.01
CBX3P4-202ENST00000540428 SUGT1Q9Y2Z0 365 aa15.09■□□□□ 0.01
CBX3P4-202ENST00000540428 TNRC18O15417 2968 aaPredicted RBP15.09■□□□□ 0.01
CBX3P4-202ENST00000540428 TCP10L2B9ZVM9 353 aa15.08■□□□□ 0
CBX3P4-202ENST00000540428 FRAT2O75474 233 aaPredicted RBP15.08■□□□□ 0
CBX3P4-202ENST00000540428 MAP3K9P80192 1104 aa15.08■□□□□ 0
CBX3P4-202ENST00000540428 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.08■□□□□ 0
CBX3P4-202ENST00000540428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.08■□□□□ 0
CBX3P4-202ENST00000540428 TEKT1Q969V4 418 aa15.08■□□□□ 0
CBX3P4-202ENST00000540428 MS4A4AQ96JQ5 239 aa15.08■□□□□ 0
CBX3P4-202ENST00000540428 TMEM39BQ9GZU3 492 aa15.08■□□□□ 0
CBX3P4-202ENST00000540428 ARAP2Q8WZ64 1704 aa15.08■□□□□ 0
CBX3P4-202ENST00000540428 E9PSI1 815 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 IFIT1P09914 478 aaKnown RBP15.07■□□□□ 0
CBX3P4-202ENST00000540428 GTF2A2P52657 109 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 SP3Q02447 781 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 CHAF1AQ13111 956 aaPredicted RBP15.07■□□□□ 0
CBX3P4-202ENST00000540428 GRIK5Q16478 980 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 FKBP1CQ5VVH2 108 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 FAM83AQ86UY5 434 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 HOOK2Q96ED9 719 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 ZDHHC15Q96MV8 337 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 USP44Q9H0E7 712 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 PCDH10Q9P2E7 1040 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 IQSEC3Q9UPP2 1182 aaPredicted RBP15.07■□□□□ 0
CBX3P4-202ENST00000540428 PTPN22Q9Y2R2 807 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 CSADQ9Y600 493 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 MAST3O60307 1309 aa15.07■□□□□ 0
CBX3P4-202ENST00000540428 FGFR2P21802 821 aa15.06■□□□□ 0
CBX3P4-202ENST00000540428 BCAMP50895 628 aa15.06■□□□□ 0
CBX3P4-202ENST00000540428 VGLL4Q14135 290 aa15.06■□□□□ 0
CBX3P4-202ENST00000540428 PUM3Q15397 648 aaKnown RBP15.06■□□□□ 0
CBX3P4-202ENST00000540428 CD99L2Q8TCZ2 262 aa15.06■□□□□ 0
CBX3P4-202ENST00000540428 EFCC1Q9HA90 598 aa15.06■□□□□ 0
CBX3P4-202ENST00000540428 TMOD2Q9NZR1 351 aa15.06■□□□□ 0
CBX3P4-202ENST00000540428 ARHGEF6Q15052 776 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 ALDH1L2Q3SY69 923 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 HHIPL2Q6UWX4 724 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 KLHDC4Q8TBB5 520 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 BRI3BPQ8WY22 251 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 SSH1Q8WYL5 1049 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 ARMC5Q96C12 935 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 ZFYVE28Q9HCC9 887 aa15.05■□□□□ -0
CBX3P4-202ENST00000540428 RPAP1Q9BWH6 1393 aaPredicted RBP15.04■□□□□ -0
CBX3P4-202ENST00000540428 CCL15-CCL14A0A0B4J2E2 113 aa15.04■□□□□ -0
CBX3P4-202ENST00000540428 SPDYE5A6NIY4 337 aa15.04■□□□□ -0
CBX3P4-202ENST00000540428 EYA2O00167 538 aa15.04■□□□□ -0
CBX3P4-202ENST00000540428 CCL15Q16663 113 aa15.04■□□□□ -0
CBX3P4-202ENST00000540428 APOBEC3HQ6NTF7 200 aaKnown RBP15.04■□□□□ -0
CBX3P4-202ENST00000540428 LPIN2Q92539 896 aa15.04■□□□□ -0
CBX3P4-202ENST00000540428 ZCCHC17Q9NP64 241 aaKnown RBP15.04■□□□□ -0
CBX3P4-202ENST00000540428 FBXO3Q9UK99 471 aa15.04■□□□□ -0
CBX3P4-202ENST00000540428 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
CBX3P4-202ENST00000540428 SLC5A1P13866 664 aa15.03■□□□□ -0
CBX3P4-202ENST00000540428 RFX5P48382 616 aaPredicted RBP15.03■□□□□ -0
CBX3P4-202ENST00000540428 TAF1CQ15572 869 aaPredicted RBP15.03■□□□□ -0
CBX3P4-202ENST00000540428 ERO1BQ86YB8 467 aa15.03■□□□□ -0
CBX3P4-202ENST00000540428 WDR66Q8TBY9 1149 aa15.03■□□□□ -0
CBX3P4-202ENST00000540428 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
CBX3P4-202ENST00000540428 OTUD5Q96G74 571 aa15.03■□□□□ -0
CBX3P4-202ENST00000540428 OTOFQ9HC10 1997 aa15.03■□□□□ -0
CBX3P4-202ENST00000540428 CACNB3P54284 484 aa15.02■□□□□ -0
CBX3P4-202ENST00000540428 SLFN5Q08AF3 891 aa15.02■□□□□ -0
CBX3P4-202ENST00000540428 DCAF15Q66K64 600 aa15.02■□□□□ -0
CBX3P4-202ENST00000540428 FAM43AQ8N2R8 423 aa15.02■□□□□ -0
CBX3P4-202ENST00000540428 WRNIP1Q96S55 665 aa15.02■□□□□ -0
CBX3P4-202ENST00000540428 SNCAIPQ9Y6H5 919 aa15.02■□□□□ -0
CBX3P4-202ENST00000540428 POTEFA5A3E0 1075 aa15.01□□□□□ -0.01
CBX3P4-202ENST00000540428 CETPP11597 493 aa15.01□□□□□ -0.01
CBX3P4-202ENST00000540428 ZBTB22O15209 634 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 TLR2O60603 784 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 CIAO1O76071 339 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 CT47B1P0C2W7 299 aaPredicted RBP15□□□□□ -0.01
CBX3P4-202ENST00000540428 CAP1Q01518 475 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 PPIL2Q13356 520 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 SNAPC2Q13487 334 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 ATG9AQ7Z3C6 839 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 FAM151AQ8WW52 585 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 GCC1Q96CN9 775 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 ZNF341Q9BYN7 854 aa15□□□□□ -0.01
CBX3P4-202ENST00000540428 IRF6O14896 467 aa14.99□□□□□ -0.01
CBX3P4-202ENST00000540428 PPATQ06203 517 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms