RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 GLMNQ92990 594 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 CCDC94Q9BW85 323 aaPredicted RBP9.18□□□□□ -0.94
CCDC60-204ENST00000539847 GTPBP4Q9BZE4 634 aaKnown RBP9.18□□□□□ -0.94
CCDC60-204ENST00000539847 ZNF652Q9Y2D9 606 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 ZDHHC9Q9Y397 364 aa9.18□□□□□ -0.94
CCDC60-204ENST00000539847 PATL2C9JE40 543 aaKnown RBP9.17□□□□□ -0.94
CCDC60-204ENST00000539847 ERC2O15083 957 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 GSPT1P15170 499 aaKnown RBP9.17□□□□□ -0.94
CCDC60-204ENST00000539847 ABL2P42684 1182 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 CTCFP49711 727 aaPredicted RBP9.17□□□□□ -0.94
CCDC60-204ENST00000539847 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 CCDC93Q567U6 631 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 PNMA8AQ86V59 439 aaPredicted RBP9.17□□□□□ -0.94
CCDC60-204ENST00000539847 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 TMEM87AQ8NBN3 555 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 TSPY26PQ9H489 355 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 TAF1DQ9H5J8 278 aaPredicted RBP9.17□□□□□ -0.94
CCDC60-204ENST00000539847 SPTLC3Q9NUV7 552 aa9.17□□□□□ -0.94
CCDC60-204ENST00000539847 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 NPHP1O15259 732 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 DDNO94850 711 aaPredicted RBP9.16□□□□□ -0.94
CCDC60-204ENST00000539847 NPR1P16066 1061 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 FKBP4Q02790 459 aaKnown RBP eCLIP9.16□□□□□ -0.94
CCDC60-204ENST00000539847 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 RDH13Q8NBN7 331 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 PIBF1Q8WXW3 757 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 AIDAQ96BJ3 306 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 FAM13BQ9NYF5 915 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 ANKRD31Q8N7Z5 1873 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 SCN4AP35499 1836 aa9.16□□□□□ -0.94
CCDC60-204ENST00000539847 PTPRCP08575 1304 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 RASSF10A6NK89 507 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 POM121CA8CG34 1229 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 HMMRO75330 724 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 KIF20AO95235 890 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
CCDC60-204ENST00000539847 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
CCDC60-204ENST00000539847 MCCP23508 829 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 CC2D2BQ6DHV5 1058 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 TPTE2Q6XPS3 522 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 NBPF5PQ86XG9 351 aaPredicted RBP9.15□□□□□ -0.94
CCDC60-204ENST00000539847 DZIP3Q86Y13 1208 aaKnown RBP9.15□□□□□ -0.94
CCDC60-204ENST00000539847 WBP1LQ9NX94 342 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 KIAA1468Q9P260 1216 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 HACL1Q9UJ83 578 aa9.15□□□□□ -0.94
CCDC60-204ENST00000539847 BTBD11A6QL63 1104 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 FZD9O00144 591 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 SNPHO15079 494 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 FOXN1O15353 648 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
CCDC60-204ENST00000539847 LILRB3O75022 631 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 A1BGP04217 495 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 SDSP20132 328 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 ALDH1B1P30837 517 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 DMTNQ08495 405 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 SYCP1Q15431 976 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 TWISTNBQ3B726 338 aaPredicted RBP9.14□□□□□ -0.95
CCDC60-204ENST00000539847 GPC2Q8N158 579 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 PSMD1Q99460 953 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 MKRN1Q9UHC7 482 aaKnown RBP9.14□□□□□ -0.95
CCDC60-204ENST00000539847 CCDC88AQ3V6T2 1871 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 ARFGEF2Q9Y6D5 1785 aa9.14□□□□□ -0.95
CCDC60-204ENST00000539847 COL11A2P13942 1736 aaPredicted RBP9.14□□□□□ -0.95
CCDC60-204ENST00000539847 VEGFBP49765 207 aa9.13□□□□□ -0.95
CCDC60-204ENST00000539847 PSEN2P49810 448 aa9.13□□□□□ -0.95
CCDC60-204ENST00000539847 MAP2K1Q02750 393 aaPredicted RBP9.13□□□□□ -0.95
CCDC60-204ENST00000539847 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
CCDC60-204ENST00000539847 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
CCDC60-204ENST00000539847 USP25Q9UHP3 1055 aa9.13□□□□□ -0.95
CCDC60-204ENST00000539847 SIPA1L3O60292 1781 aaPredicted RBP9.13□□□□□ -0.95
CCDC60-204ENST00000539847 RIC1Q4ADV7 1423 aa9.13□□□□□ -0.95
CCDC60-204ENST00000539847 SLX4Q8IY92 1834 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 AOX1Q06278 1338 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 WDR33Q9C0J8 1336 aaKnown RBP9.12□□□□□ -0.95
CCDC60-204ENST00000539847 KDM4AO75164 1064 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 PRKAR2BP31323 418 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 EPHX2P34913 555 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 RBM10P98175 930 aaKnown RBP9.12□□□□□ -0.95
CCDC60-204ENST00000539847 NOLC1Q14978 699 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC60-204ENST00000539847 CRY2Q49AN0 593 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 TAF3Q5VWG9 929 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 TMX3Q96JJ7 454 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 DIAPH3Q9NSV4 1193 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 BCORQ6W2J9 1755 aa9.12□□□□□ -0.95
CCDC60-204ENST00000539847 SYCE3A1L190 88 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 ERVV-1B6SEH8 477 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 AP1G2O75843 785 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 SLC10A3P09131 477 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 GJA5P36382 358 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 IARSP41252 1262 aaKnown RBP9.11□□□□□ -0.95
CCDC60-204ENST00000539847 GCGRP47871 477 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 FAM193AP78312 1265 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 KCNA1Q09470 495 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 CCDC183Q5T5S1 534 aa9.11□□□□□ -0.95
CCDC60-204ENST00000539847 FOXD4L5Q5VV16 416 aaPredicted RBP9.11□□□□□ -0.95
CCDC60-204ENST00000539847 CEP85Q6P2H3 762 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms